RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	ESYT3	A0FGR9	886 aa		5.29	□□□□□ -1.56
CCNL1-223	ENST00000481173	RAD17	O75943	681 aa		5.29	□□□□□ -1.56
CCNL1-223	ENST00000481173	FGR	P09769	529 aa		5.29	□□□□□ -1.56
CCNL1-223	ENST00000481173	GNAT1	P11488	350 aa		5.29	□□□□□ -1.56
CCNL1-223	ENST00000481173	GRK2	P25098	689 aa		5.29	□□□□□ -1.56
CCNL1-223	ENST00000481173	MCM7	P33993	719 aa		5.29	□□□□□ -1.56
CCNL1-223	ENST00000481173	GRK3	P35626	688 aa		5.29	□□□□□ -1.56
CCNL1-223	ENST00000481173	MAP4K2	Q12851	820 aa		5.29	□□□□□ -1.56
CCNL1-223	ENST00000481173	MCF2L2	Q86YR7	1114 aa		5.29	□□□□□ -1.56
CCNL1-223	ENST00000481173	C1orf210	Q8IVY1	113 aa		5.29	□□□□□ -1.56
CCNL1-223	ENST00000481173	UHMK1	Q8TAS1	419 aa	Known RBP	5.29	□□□□□ -1.56
CCNL1-223	ENST00000481173	NEU4	Q8WWR8	484 aa	Predicted RBP	5.29	□□□□□ -1.56
CCNL1-223	ENST00000481173	KCTD13	Q8WZ19	329 aa		5.29	□□□□□ -1.56
CCNL1-223	ENST00000481173	OR14A2	Q96R54	314 aa		5.29	□□□□□ -1.56
CCNL1-223	ENST00000481173	CARD11	Q9BXL7	1154 aa		5.29	□□□□□ -1.56
CCNL1-223	ENST00000481173	SLC39A2	Q9NP94	309 aa		5.29	□□□□□ -1.56
CCNL1-223	ENST00000481173	OAZ3	Q9UMX2	235 aa		5.29	□□□□□ -1.56
CCNL1-223	ENST00000481173	DLX3	O60479	287 aa		5.28	□□□□□ -1.56
CCNL1-223	ENST00000481173	CDC14B	O60729	498 aa		5.28	□□□□□ -1.56
CCNL1-223	ENST00000481173	GJB6	O95452	261 aa		5.28	□□□□□ -1.56
CCNL1-223	ENST00000481173	CR2	P20023	1033 aa		5.28	□□□□□ -1.56
CCNL1-223	ENST00000481173	DPT	Q07507	201 aa		5.28	□□□□□ -1.56
CCNL1-223	ENST00000481173	SLC10A6	Q3KNW5	377 aa		5.28	□□□□□ -1.56
CCNL1-223	ENST00000481173	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	5.28	□□□□□ -1.56
CCNL1-223	ENST00000481173	HNRNPLL	Q8WVV9	542 aa	Known RBP	5.28	□□□□□ -1.56
CCNL1-223	ENST00000481173		A0A1W2PQU0	124 aa		5.27	□□□□□ -1.57
CCNL1-223	ENST00000481173	ACOT7	O00154	380 aa		5.27	□□□□□ -1.57
CCNL1-223	ENST00000481173	POLD1	P28340	1107 aa		5.27	□□□□□ -1.57
CCNL1-223	ENST00000481173	SPIRE1	Q08AE8	756 aa		5.27	□□□□□ -1.57
CCNL1-223	ENST00000481173	KCNT2	Q6UVM3	1135 aa		5.27	□□□□□ -1.57
CCNL1-223	ENST00000481173	POLN	Q7Z5Q5	900 aa		5.27	□□□□□ -1.57
CCNL1-223	ENST00000481173	CELF2-AS1	Q8N7Q2	184 aa		5.27	□□□□□ -1.57
CCNL1-223	ENST00000481173	IL17D	Q8TAD2	202 aa		5.27	□□□□□ -1.57
CCNL1-223	ENST00000481173	PLEKHG4B	Q96PX9	1271 aa		5.27	□□□□□ -1.57
CCNL1-223	ENST00000481173	CD244	Q9BZW8	370 aa		5.27	□□□□□ -1.57
CCNL1-223	ENST00000481173	DSE	Q9UL01	958 aa		5.27	□□□□□ -1.57
CCNL1-223	ENST00000481173	R3HCC1	Q9Y3T6	440 aa	Known RBP	5.27	□□□□□ -1.57
CCNL1-223	ENST00000481173	TOP3A	Q13472	1001 aa	Predicted RBP	5.26	□□□□□ -1.57
CCNL1-223	ENST00000481173	LBX2	Q6XYB7	198 aa		5.26	□□□□□ -1.57
CCNL1-223	ENST00000481173	ANKS3	Q6ZW76	656 aa		5.26	□□□□□ -1.57
CCNL1-223	ENST00000481173	KCTD1	Q719H9	257 aa		5.26	□□□□□ -1.57
CCNL1-223	ENST00000481173	EEPD1	Q7L9B9	569 aa		5.26	□□□□□ -1.57
CCNL1-223	ENST00000481173	ZNF808	Q8N4W9	903 aa	Predicted RBP	5.26	□□□□□ -1.57
CCNL1-223	ENST00000481173	AMER2	Q8N7J2	671 aa		5.26	□□□□□ -1.57
CCNL1-223	ENST00000481173	PLA2G12B	Q9BX93	195 aa		5.26	□□□□□ -1.57
CCNL1-223	ENST00000481173	C12orf65	Q9H3J6	166 aa	Known RBP	5.26	□□□□□ -1.57
CCNL1-223	ENST00000481173	NR2E1	Q9Y466	385 aa		5.26	□□□□□ -1.57
CCNL1-223	ENST00000481173	NUB1	Q9Y5A7	615 aa		5.26	□□□□□ -1.57
CCNL1-223	ENST00000481173	SLC30A1	Q9Y6M5	507 aa		5.26	□□□□□ -1.57
CCNL1-223	ENST00000481173		A0A087X1B8	175 aa		5.25	□□□□□ -1.57
CCNL1-223	ENST00000481173	AGRP	O00253	132 aa		5.25	□□□□□ -1.57
CCNL1-223	ENST00000481173	MATN2	O00339	956 aa		5.25	□□□□□ -1.57
CCNL1-223	ENST00000481173	DUSP8	Q13202	625 aa		5.25	□□□□□ -1.57
CCNL1-223	ENST00000481173	TBR1	Q16650	682 aa		5.25	□□□□□ -1.57
CCNL1-223	ENST00000481173	KIZ	Q2M2Z5	673 aa		5.25	□□□□□ -1.57
CCNL1-223	ENST00000481173	HABP4	Q5JVS0	413 aa	Known RBP	5.25	□□□□□ -1.57
CCNL1-223	ENST00000481173	MAMDC4	Q6UXC1	1216 aa		5.25	□□□□□ -1.57
CCNL1-223	ENST00000481173	ZNF575	Q86XF7	245 aa		5.25	□□□□□ -1.57
CCNL1-223	ENST00000481173	FAM89A	Q96GI7	184 aa		5.25	□□□□□ -1.57
CCNL1-223	ENST00000481173	PDGFD	Q9GZP0	370 aa	Predicted RBP	5.25	□□□□□ -1.57
CCNL1-223	ENST00000481173	BLACE	A4D250	179 aa		5.24	□□□□□ -1.57
CCNL1-223	ENST00000481173	CUTA	O60888	179 aa		5.24	□□□□□ -1.57
CCNL1-223	ENST00000481173	ACRV1	P26436	265 aa		5.24	□□□□□ -1.57
CCNL1-223	ENST00000481173	EPHA5	P54756	1037 aa		5.24	□□□□□ -1.57
CCNL1-223	ENST00000481173	INHBC	P55103	352 aa		5.24	□□□□□ -1.57
CCNL1-223	ENST00000481173	NANOS3	P60323	173 aa	Known RBP	5.24	□□□□□ -1.57
CCNL1-223	ENST00000481173	ZMAT1	Q5H9K5	638 aa		5.24	□□□□□ -1.57
CCNL1-223	ENST00000481173	FNDC7	Q5VTL7	733 aa		5.24	□□□□□ -1.57
CCNL1-223	ENST00000481173	RSPO2	Q6UXX9	243 aa	Predicted RBP	5.24	□□□□□ -1.57
CCNL1-223	ENST00000481173	CACTIN	Q8WUQ7	758 aa	Known RBP	5.24	□□□□□ -1.57
CCNL1-223	ENST00000481173	KIAA1683	Q9H0B3	1180 aa		5.24	□□□□□ -1.57
CCNL1-223	ENST00000481173	MMRN2	Q9H8L6	949 aa		5.24	□□□□□ -1.57
CCNL1-223	ENST00000481173	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	5.23	□□□□□ -1.57
CCNL1-223	ENST00000481173	SOD2	P04179	222 aa		5.23	□□□□□ -1.57
CCNL1-223	ENST00000481173	ADCY8	P40145	1251 aa		5.23	□□□□□ -1.57
CCNL1-223	ENST00000481173	PURA	Q00577	322 aa	Known RBP	5.23	□□□□□ -1.57
CCNL1-223	ENST00000481173	DBP	Q10586	325 aa	Predicted RBP	5.23	□□□□□ -1.57
CCNL1-223	ENST00000481173	NTRK3	Q16288	839 aa		5.23	□□□□□ -1.57
CCNL1-223	ENST00000481173	WDR72	Q3MJ13	1102 aa		5.23	□□□□□ -1.57
CCNL1-223	ENST00000481173	SLC43A3	Q8NBI5	491 aa		5.23	□□□□□ -1.57
CCNL1-223	ENST00000481173	DCAF4	Q8WV16	495 aa		5.23	□□□□□ -1.57
CCNL1-223	ENST00000481173	EPN3	Q9H201	632 aa		5.23	□□□□□ -1.57
CCNL1-223	ENST00000481173	IPPK	Q9H8X2	491 aa		5.23	□□□□□ -1.57
CCNL1-223	ENST00000481173	U2SURP	O15042	1029 aa	Known RBP	5.22	□□□□□ -1.57
CCNL1-223	ENST00000481173	ARHGAP6	O43182	974 aa		5.22	□□□□□ -1.57
CCNL1-223	ENST00000481173	PRODH	O43272	600 aa		5.22	□□□□□ -1.57
CCNL1-223	ENST00000481173	KLF4	O43474	513 aa		5.22	□□□□□ -1.57
CCNL1-223	ENST00000481173	MSX2	P35548	267 aa	Predicted RBP	5.22	□□□□□ -1.57
CCNL1-223	ENST00000481173	KCNQ1	P51787	676 aa		5.22	□□□□□ -1.57
CCNL1-223	ENST00000481173	FOXL1	Q12952	345 aa		5.22	□□□□□ -1.57
CCNL1-223	ENST00000481173	TUBA3C	Q13748	450 aa		5.22	□□□□□ -1.57
CCNL1-223	ENST00000481173	DDR2	Q16832	855 aa		5.22	□□□□□ -1.57
CCNL1-223	ENST00000481173	KRTAP15-1	Q3LI76	137 aa		5.22	□□□□□ -1.57
CCNL1-223	ENST00000481173	TUBA3E	Q6PEY2	450 aa		5.22	□□□□□ -1.57
CCNL1-223	ENST00000481173	LARP4	Q71RC2	724 aa	Known RBP eCLIP	5.22	□□□□□ -1.57
CCNL1-223	ENST00000481173	LDLRAD3	Q86YD5	345 aa		5.22	□□□□□ -1.57
CCNL1-223	ENST00000481173	SH3RF2	Q8TEC5	729 aa		5.22	□□□□□ -1.57
CCNL1-223	ENST00000481173	LARP4B	Q92615	738 aa	Known RBP	5.22	□□□□□ -1.57
CCNL1-223	ENST00000481173	GML	Q99445	158 aa		5.22	□□□□□ -1.57
CCNL1-223	ENST00000481173	TLR9	Q9NR96	1032 aa		5.22	□□□□□ -1.57

Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms