RNA–Protein interactions for RNA: ENST00000480382.1

CCM2-212, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-212ENST00000480382 WDR64B1ANS9 1081 aa13.63□□□□□ -0.23
CCM2-212ENST00000480382 H3BQV1 296 aa13.63□□□□□ -0.23
CCM2-212ENST00000480382 CYP2C18P33260 490 aa13.63□□□□□ -0.23
CCM2-212ENST00000480382 STAT5BP51692 787 aa13.63□□□□□ -0.23
CCM2-212ENST00000480382 CCL23P55773 120 aa13.63□□□□□ -0.23
CCM2-212ENST00000480382 FAM160B1Q5W0V3 765 aa13.63□□□□□ -0.23
CCM2-212ENST00000480382 AFAP1L1Q8TED9 768 aa13.63□□□□□ -0.23
CCM2-212ENST00000480382 LMBR1Q8WVP7 490 aa13.63□□□□□ -0.23
CCM2-212ENST00000480382 HAS1Q92839 578 aa13.63□□□□□ -0.23
CCM2-212ENST00000480382 WNT8BQ93098 351 aa13.63□□□□□ -0.23
CCM2-212ENST00000480382 UBE2OQ9C0C9 1292 aaKnown RBP13.63□□□□□ -0.23
CCM2-212ENST00000480382 WNT8AQ9H1J5 351 aa13.63□□□□□ -0.23
CCM2-212ENST00000480382 ZNF302Q9NR11 478 aa13.63□□□□□ -0.23
CCM2-212ENST00000480382 SETD4Q9NVD3 440 aa13.63□□□□□ -0.23
CCM2-212ENST00000480382 TRPC6Q9Y210 931 aa13.63□□□□□ -0.23
CCM2-212ENST00000480382 PCDHA10Q9Y5I2 948 aa13.63□□□□□ -0.23
CCM2-212ENST00000480382 IGSF9BQ9UPX0 1349 aa13.63□□□□□ -0.23
CCM2-212ENST00000480382 LAMA2P24043 3122 aaKnown RBP13.62□□□□□ -0.23
CCM2-212ENST00000480382 TBX3O15119 743 aa13.62□□□□□ -0.23
CCM2-212ENST00000480382 TREHO43280 583 aa13.62□□□□□ -0.23
CCM2-212ENST00000480382 NEMFO60524 1076 aa13.62□□□□□ -0.23
CCM2-212ENST00000480382 PSAPP07602 524 aa13.62□□□□□ -0.23
CCM2-212ENST00000480382 U2AF2P26368 475 aaKnown RBP eCLIP13.62□□□□□ -0.23
CCM2-212ENST00000480382 SFNP31947 248 aa13.62□□□□□ -0.23
CCM2-212ENST00000480382 JAK3P52333 1124 aa13.62□□□□□ -0.23
CCM2-212ENST00000480382 FPGSQ05932 587 aa13.62□□□□□ -0.23
CCM2-212ENST00000480382 PPFIA1Q13136 1202 aa13.62□□□□□ -0.23
CCM2-212ENST00000480382 PTK7Q13308 1070 aa13.62□□□□□ -0.23
CCM2-212ENST00000480382 NBR1Q14596 966 aa13.62□□□□□ -0.23
CCM2-212ENST00000480382 PLCB4Q15147 1175 aa13.62□□□□□ -0.23
CCM2-212ENST00000480382 CALCRLQ16602 461 aa13.62□□□□□ -0.23
CCM2-212ENST00000480382 LARP1BQ659C4 914 aaKnown RBP13.62□□□□□ -0.23
CCM2-212ENST00000480382 MCTP1Q6DN14 999 aa13.62□□□□□ -0.23
CCM2-212ENST00000480382 MFSD5Q6N075 450 aa13.62□□□□□ -0.23
CCM2-212ENST00000480382 SWSAP1Q6NVH7 229 aa13.62□□□□□ -0.23
CCM2-212ENST00000480382 PDXDC2PQ6P474 469 aa13.62□□□□□ -0.23
CCM2-212ENST00000480382 B3GNT9Q6UX72 402 aa13.62□□□□□ -0.23
CCM2-212ENST00000480382 PLPPR4Q7Z2D5 763 aa13.62□□□□□ -0.23
CCM2-212ENST00000480382 ATP6V0A1Q93050 837 aa13.62□□□□□ -0.23
CCM2-212ENST00000480382 FAM20AQ96MK3 541 aa13.62□□□□□ -0.23
CCM2-212ENST00000480382 DISC1Q9NRI5 854 aa13.62□□□□□ -0.23
CCM2-212ENST00000480382 GABBR1Q9UBS5 961 aa13.62□□□□□ -0.23
CCM2-212ENST00000480382 VAV3Q9UKW4 847 aa13.62□□□□□ -0.23
CCM2-212ENST00000480382 NRCAMQ92823 1304 aa13.62□□□□□ -0.23
CCM2-212ENST00000480382 LAMA3Q16787 3333 aa13.61□□□□□ -0.23
CCM2-212ENST00000480382 MYH15Q9Y2K3 1946 aa13.61□□□□□ -0.23
CCM2-212ENST00000480382 MARCH6O60337 910 aa13.61□□□□□ -0.23
CCM2-212ENST00000480382 CSF2RAP15509 400 aa13.61□□□□□ -0.23
CCM2-212ENST00000480382 MCM7P33993 719 aa13.61□□□□□ -0.23
CCM2-212ENST00000480382 BMP8BP34820 402 aa13.61□□□□□ -0.23
CCM2-212ENST00000480382 EPHB4P54760 987 aa13.61□□□□□ -0.23
CCM2-212ENST00000480382 IGBP1P78318 339 aa13.61□□□□□ -0.23
CCM2-212ENST00000480382 GRIK4Q16099 956 aa13.61□□□□□ -0.23
CCM2-212ENST00000480382 UGCGQ16739 394 aa13.61□□□□□ -0.23
CCM2-212ENST00000480382 TTC38Q5R3I4 469 aa13.61□□□□□ -0.23
CCM2-212ENST00000480382 MIER3Q7Z3K6 550 aa13.61□□□□□ -0.23
CCM2-212ENST00000480382 SERINC5Q86VE9 423 aa13.61□□□□□ -0.23
CCM2-212ENST00000480382 TMEM199Q8N511 208 aa13.61□□□□□ -0.23
CCM2-212ENST00000480382 CCDC155Q8N6L0 562 aa13.61□□□□□ -0.23
CCM2-212ENST00000480382 CAGE1Q8TC20 777 aa13.61□□□□□ -0.23
CCM2-212ENST00000480382 INTS4Q96HW7 963 aaKnown RBP13.61□□□□□ -0.23
CCM2-212ENST00000480382 SCLYQ96I15 445 aa13.61□□□□□ -0.23
CCM2-212ENST00000480382 NOL7Q9UMY1 257 aaKnown RBP13.61□□□□□ -0.23
CCM2-212ENST00000480382 ARID2Q68CP9 1835 aa13.61□□□□□ -0.23
CCM2-212ENST00000480382 POTEB3A0JP26 581 aa13.6□□□□□ -0.23
CCM2-212ENST00000480382 VPS37CA5D8V6 355 aaPredicted RBP13.6□□□□□ -0.23
CCM2-212ENST00000480382 PITPNM1O00562 1244 aa13.6□□□□□ -0.23
CCM2-212ENST00000480382 BAG4O95429 457 aaKnown RBP13.6□□□□□ -0.23
CCM2-212ENST00000480382 GNAT1P11488 350 aa13.6□□□□□ -0.23
CCM2-212ENST00000480382 INSRRP14616 1297 aa13.6□□□□□ -0.23
CCM2-212ENST00000480382 ATP4AP20648 1035 aa13.6□□□□□ -0.23
CCM2-212ENST00000480382 SLC26A2P50443 739 aa13.6□□□□□ -0.23
CCM2-212ENST00000480382 ADAM17P78536 824 aa13.6□□□□□ -0.23
CCM2-212ENST00000480382 PPP2R5CQ13362 524 aa13.6□□□□□ -0.23
CCM2-212ENST00000480382 BFSP2Q13515 415 aa13.6□□□□□ -0.23
CCM2-212ENST00000480382 ZNF174Q15697 407 aa13.6□□□□□ -0.23
CCM2-212ENST00000480382 TRIM71Q2Q1W2 868 aaKnown RBP13.6□□□□□ -0.23
CCM2-212ENST00000480382 POTEBQ6S5H4 581 aa13.6□□□□□ -0.23
CCM2-212ENST00000480382 TRMT1LQ7Z2T5 733 aaKnown RBP13.6□□□□□ -0.23
CCM2-212ENST00000480382 CKAP2LQ8IYA6 745 aa13.6□□□□□ -0.23
CCM2-212ENST00000480382 SLFN12Q8IYM2 578 aa13.6□□□□□ -0.23
CCM2-212ENST00000480382 ATP8B4Q8TF62 1192 aa13.6□□□□□ -0.23
CCM2-212ENST00000480382 TRAPPC12Q8WVT3 735 aa13.6□□□□□ -0.23
CCM2-212ENST00000480382 ZBTB10Q96DT7 871 aa13.6□□□□□ -0.23
CCM2-212ENST00000480382 TMEM60Q9H2L4 133 aa13.6□□□□□ -0.23
CCM2-212ENST00000480382 TUBE1Q9UJT0 475 aa13.6□□□□□ -0.23
CCM2-212ENST00000480382 MAFBQ9Y5Q3 323 aaPredicted RBP13.6□□□□□ -0.23
CCM2-212ENST00000480382 TRIOBPQ9H2D6 2365 aa13.6□□□□□ -0.23
CCM2-212ENST00000480382 RBAK-RBAKDNI3L0D1 243 aa13.59□□□□□ -0.23
CCM2-212ENST00000480382 EML1O00423 815 aa13.59□□□□□ -0.23
CCM2-212ENST00000480382 ZNF862O60290 1169 aa13.59□□□□□ -0.23
CCM2-212ENST00000480382 CKBP12277 381 aa13.59□□□□□ -0.23
CCM2-212ENST00000480382 TRAPPC10P48553 1259 aa13.59□□□□□ -0.23
CCM2-212ENST00000480382 TOB1P50616 345 aaPredicted RBP13.59□□□□□ -0.23
CCM2-212ENST00000480382 PRKCEQ02156 737 aa13.59□□□□□ -0.23
CCM2-212ENST00000480382 RBL2Q08999 1139 aa13.59□□□□□ -0.23
CCM2-212ENST00000480382 SPIRE1Q08AE8 756 aa13.59□□□□□ -0.23
CCM2-212ENST00000480382 PPIGQ13427 754 aaKnown RBP eCLIP13.59□□□□□ -0.23
CCM2-212ENST00000480382 MARCH8Q5T0T0 291 aa13.59□□□□□ -0.23
CCM2-212ENST00000480382 NCAPH2Q6IBW4 605 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms