RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 PSTPIP2Q9H939 334 aa8.13□□□□□ -1.11
COL17A1-205ENST00000480127 ALG13Q9NP73 1137 aaKnown RBP8.13□□□□□ -1.11
COL17A1-205ENST00000480127 PKD2L1Q9P0L9 805 aa8.13□□□□□ -1.11
COL17A1-205ENST00000480127 CD207Q9UJ71 328 aa8.13□□□□□ -1.11
COL17A1-205ENST00000480127 TMEM221A6NGB7 291 aa8.12□□□□□ -1.11
COL17A1-205ENST00000480127 SPATA31C2B4DYI2 1134 aa8.12□□□□□ -1.11
COL17A1-205ENST00000480127 M0R296 226 aa8.12□□□□□ -1.11
COL17A1-205ENST00000480127 ENPP3O14638 875 aa8.12□□□□□ -1.11
COL17A1-205ENST00000480127 FIBPO43427 364 aa8.12□□□□□ -1.11
COL17A1-205ENST00000480127 STAM2O75886 525 aa8.12□□□□□ -1.11
COL17A1-205ENST00000480127 CSPG5O95196 566 aa8.12□□□□□ -1.11
COL17A1-205ENST00000480127 EYA4O95677 639 aa8.12□□□□□ -1.11
COL17A1-205ENST00000480127 RXRAP19793 462 aa8.12□□□□□ -1.11
COL17A1-205ENST00000480127 IBSPP21815 317 aaPredicted RBP8.12□□□□□ -1.11
COL17A1-205ENST00000480127 DNAJB1P25685 340 aa8.12□□□□□ -1.11
COL17A1-205ENST00000480127 ICAM3P32942 547 aa8.12□□□□□ -1.11
COL17A1-205ENST00000480127 ZNF76P36508 570 aa8.12□□□□□ -1.11
COL17A1-205ENST00000480127 MRPS9P82933 396 aaKnown RBP8.12□□□□□ -1.11
COL17A1-205ENST00000480127 ARHGAP4P98171 946 aa8.12□□□□□ -1.11
COL17A1-205ENST00000480127 AKAP17AQ02040 695 aaKnown RBP8.12□□□□□ -1.11
COL17A1-205ENST00000480127 MGAT3Q09327 533 aa8.12□□□□□ -1.11
COL17A1-205ENST00000480127 TCF15Q12870 199 aa8.12□□□□□ -1.11
COL17A1-205ENST00000480127 METTL7BQ6UX53 244 aa8.12□□□□□ -1.11
COL17A1-205ENST00000480127 TRIM67Q6ZTA4 783 aa8.12□□□□□ -1.11
COL17A1-205ENST00000480127 ADGRD2Q7Z7M1 963 aa8.12□□□□□ -1.11
COL17A1-205ENST00000480127 RSPH3Q86UC2 560 aa8.12□□□□□ -1.11
COL17A1-205ENST00000480127 TRIM50Q86XT4 487 aa8.12□□□□□ -1.11
COL17A1-205ENST00000480127 GIMAP8Q8ND71 665 aaPredicted RBP8.12□□□□□ -1.11
COL17A1-205ENST00000480127 LMBR1Q8WVP7 490 aa8.12□□□□□ -1.11
COL17A1-205ENST00000480127 GLG1Q92896 1179 aa8.12□□□□□ -1.11
COL17A1-205ENST00000480127 CDHR1Q96JP9 859 aa8.12□□□□□ -1.11
COL17A1-205ENST00000480127 ESYT1Q9BSJ8 1104 aa8.12□□□□□ -1.11
COL17A1-205ENST00000480127 LRRC2Q9BYS8 371 aa8.12□□□□□ -1.11
COL17A1-205ENST00000480127 IL25Q9H293 177 aa8.12□□□□□ -1.11
COL17A1-205ENST00000480127 AZI2Q9H6S1 392 aa8.12□□□□□ -1.11
COL17A1-205ENST00000480127 CLEC1BQ9P126 229 aa8.12□□□□□ -1.11
COL17A1-205ENST00000480127 PLAGL2Q9UPG8 496 aa8.12□□□□□ -1.11
COL17A1-205ENST00000480127 RWDD3Q9Y3V2 267 aa8.12□□□□□ -1.11
COL17A1-205ENST00000480127 TECTAO75443 2155 aa8.12□□□□□ -1.11
COL17A1-205ENST00000480127 FRMPD4Q14CM0 1322 aa8.11□□□□□ -1.11
COL17A1-205ENST00000480127 hCG_1642624A0A1W2PR95 340 aa8.11□□□□□ -1.11
COL17A1-205ENST00000480127 LOC730098B7Z3J9 87 aa8.11□□□□□ -1.11
COL17A1-205ENST00000480127 M0QZ92 97 aa8.11□□□□□ -1.11
COL17A1-205ENST00000480127 ST18O60284 1047 aa8.11□□□□□ -1.11
COL17A1-205ENST00000480127 DGKIO75912 1065 aa8.11□□□□□ -1.11
COL17A1-205ENST00000480127 GHRP10912 638 aa8.11□□□□□ -1.11
COL17A1-205ENST00000480127 PTPN5P54829 565 aa8.11□□□□□ -1.11
COL17A1-205ENST00000480127 NAPAP54920 295 aa8.11□□□□□ -1.11
COL17A1-205ENST00000480127 ZXDAP98168 799 aa8.11□□□□□ -1.11
COL17A1-205ENST00000480127 BTG3Q14201 252 aaPredicted RBP8.11□□□□□ -1.11
COL17A1-205ENST00000480127 LPIN1Q14693 890 aa8.11□□□□□ -1.11
COL17A1-205ENST00000480127 CBX2Q14781 532 aaPredicted RBP8.11□□□□□ -1.11
COL17A1-205ENST00000480127 CREB3L3Q68CJ9 461 aa8.11□□□□□ -1.11
COL17A1-205ENST00000480127 USP17L6PQ6QN14 398 aa8.11□□□□□ -1.11
COL17A1-205ENST00000480127 RUFY4Q6ZNE9 571 aa8.11□□□□□ -1.11
COL17A1-205ENST00000480127 CENPQQ7L2Z9 268 aaPredicted RBP8.11□□□□□ -1.11
COL17A1-205ENST00000480127 CRIPAKQ8N1N5 446 aa8.11□□□□□ -1.11
COL17A1-205ENST00000480127 SPPL3Q8TCT6 385 aa8.11□□□□□ -1.11
COL17A1-205ENST00000480127 LINC01599Q8WXQ3 324 aa8.11□□□□□ -1.11
COL17A1-205ENST00000480127 TNPO1Q92973 898 aaKnown RBP8.11□□□□□ -1.11
COL17A1-205ENST00000480127 P2RX5Q93086 422 aa8.11□□□□□ -1.11
COL17A1-205ENST00000480127 PBXIP1Q96AQ6 731 aa8.11□□□□□ -1.11
COL17A1-205ENST00000480127 INPP4AQ96PE3 977 aaPredicted RBP8.11□□□□□ -1.11
COL17A1-205ENST00000480127 PLVAPQ9BX97 442 aa8.11□□□□□ -1.11
COL17A1-205ENST00000480127 RIOX1Q9H6W3 641 aa8.11□□□□□ -1.11
COL17A1-205ENST00000480127 LY9Q9HBG7 655 aa8.11□□□□□ -1.11
COL17A1-205ENST00000480127 SENP2Q9HC62 589 aa8.11□□□□□ -1.11
COL17A1-205ENST00000480127 TRPC6Q9Y210 931 aa8.11□□□□□ -1.11
COL17A1-205ENST00000480127 MYO7AQ13402 2215 aa8.1□□□□□ -1.11
COL17A1-205ENST00000480127 NRCAMQ92823 1304 aa8.1□□□□□ -1.11
COL17A1-205ENST00000480127 GOLGA8AA7E2F4 631 aa8.1□□□□□ -1.11
COL17A1-205ENST00000480127 GOLGA8BA8MQT2 603 aa8.1□□□□□ -1.11
COL17A1-205ENST00000480127 SLC27A2O14975 620 aa8.1□□□□□ -1.11
COL17A1-205ENST00000480127 ZBTB43O43298 467 aa8.1□□□□□ -1.11
COL17A1-205ENST00000480127 CYTH3O43739 400 aa8.1□□□□□ -1.11
COL17A1-205ENST00000480127 PLEKHA8P1O95397 391 aa8.1□□□□□ -1.11
COL17A1-205ENST00000480127 GLP2RO95838 553 aa8.1□□□□□ -1.11
COL17A1-205ENST00000480127 ITGB1P05556 798 aa8.1□□□□□ -1.11
COL17A1-205ENST00000480127 MARK3P27448 753 aa8.1□□□□□ -1.11
COL17A1-205ENST00000480127 NDUFV1P49821 464 aa8.1□□□□□ -1.11
COL17A1-205ENST00000480127 IGBP1P78318 339 aa8.1□□□□□ -1.11
COL17A1-205ENST00000480127 TROAPQ12815 778 aa8.1□□□□□ -1.11
COL17A1-205ENST00000480127 COASYQ13057 564 aa8.1□□□□□ -1.11
COL17A1-205ENST00000480127 MTMR1Q13613 665 aa8.1□□□□□ -1.11
COL17A1-205ENST00000480127 KRT32Q14532 448 aa8.1□□□□□ -1.11
COL17A1-205ENST00000480127 PKN1Q16512 942 aa8.1□□□□□ -1.11
COL17A1-205ENST00000480127 UBE2SQ16763 222 aa8.1□□□□□ -1.11
COL17A1-205ENST00000480127 XRRA1Q6P2D8 792 aa8.1□□□□□ -1.11
COL17A1-205ENST00000480127 RTN4RL1Q86UN2 441 aaPredicted RBP8.1□□□□□ -1.11
COL17A1-205ENST00000480127 MB21D2Q8IYB1 491 aaPredicted RBP8.1□□□□□ -1.11
COL17A1-205ENST00000480127 CMTR1Q8N1G2 835 aaKnown RBP8.1□□□□□ -1.11
COL17A1-205ENST00000480127 FBXL6Q8N531 539 aa8.1□□□□□ -1.11
COL17A1-205ENST00000480127 EFHBQ8N7U6 833 aa8.1□□□□□ -1.11
COL17A1-205ENST00000480127 SMRP1Q8NCR6 262 aa8.1□□□□□ -1.11
COL17A1-205ENST00000480127 MAP4K1Q92918 833 aa8.1□□□□□ -1.11
COL17A1-205ENST00000480127 CCDC136Q96JN2 1154 aa8.1□□□□□ -1.11
COL17A1-205ENST00000480127 SDF4Q9BRK5 362 aa8.1□□□□□ -1.11
COL17A1-205ENST00000480127 SPZ1Q9BXG8 430 aa8.1□□□□□ -1.11
COL17A1-205ENST00000480127 AGO3Q9H9G7 860 aaKnown RBP8.1□□□□□ -1.11
COL17A1-205ENST00000480127 RBM28Q9NW13 759 aaKnown RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms