RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 NOSTRINQ8IVI9 506 aa10.12□□□□□ -0.79
DDX56-211ENST00000479602 DIS3L2Q8IYB7 885 aaKnown RBP10.12□□□□□ -0.79
DDX56-211ENST00000479602 GIMAP8Q8ND71 665 aaPredicted RBP10.12□□□□□ -0.79
DDX56-211ENST00000479602 ADAMTS19Q8TE59 1207 aa10.12□□□□□ -0.79
DDX56-211ENST00000479602 PPM1EQ8WY54 764 aa10.12□□□□□ -0.79
DDX56-211ENST00000479602 BCAS3Q9H6U6 928 aa10.12□□□□□ -0.79
DDX56-211ENST00000479602 LMCD1Q9NZU5 365 aa10.12□□□□□ -0.79
DDX56-211ENST00000479602 CIZ1Q9ULV3 898 aaPredicted RBP10.12□□□□□ -0.79
DDX56-211ENST00000479602 PCDHA6Q9UN73 950 aa10.12□□□□□ -0.79
DDX56-211ENST00000479602 PCDHA8Q9Y5H6 950 aa10.12□□□□□ -0.79
DDX56-211ENST00000479602 UBIAD1Q9Y5Z9 338 aa10.12□□□□□ -0.79
DDX56-211ENST00000479602 NFASCO94856 1347 aa10.11□□□□□ -0.79
DDX56-211ENST00000479602 IGLV3-22A0A075B6J6 115 aa10.11□□□□□ -0.79
DDX56-211ENST00000479602 hCG_1642624A0A1W2PR95 340 aa10.11□□□□□ -0.79
DDX56-211ENST00000479602 ZBBXA8MT70 800 aa10.11□□□□□ -0.79
DDX56-211ENST00000479602 RBAK-RBAKDNI3L0D1 243 aa10.11□□□□□ -0.79
DDX56-211ENST00000479602 MEIS1O00470 390 aa10.11□□□□□ -0.79
DDX56-211ENST00000479602 FIBPO43427 364 aa10.11□□□□□ -0.79
DDX56-211ENST00000479602 IGFBP4P22692 258 aa10.11□□□□□ -0.79
DDX56-211ENST00000479602 ANP32AP39687 249 aaKnown RBP10.11□□□□□ -0.79
DDX56-211ENST00000479602 PSEN2P49810 448 aa10.11□□□□□ -0.79
DDX56-211ENST00000479602 WDR5P61964 334 aaKnown RBP10.11□□□□□ -0.79
DDX56-211ENST00000479602 ADAM17P78536 824 aa10.11□□□□□ -0.79
DDX56-211ENST00000479602 MRPS9P82933 396 aaKnown RBP10.11□□□□□ -0.79
DDX56-211ENST00000479602 PTK7Q13308 1070 aa10.11□□□□□ -0.79
DDX56-211ENST00000479602 NONOQ15233 471 aaKnown RBP eCLIP10.11□□□□□ -0.79
DDX56-211ENST00000479602 HSDL1Q3SXM5 330 aa10.11□□□□□ -0.79
DDX56-211ENST00000479602 CEP55Q53EZ4 464 aa10.11□□□□□ -0.79
DDX56-211ENST00000479602 RILPL1Q5EBL4 403 aa10.11□□□□□ -0.79
DDX56-211ENST00000479602 FAM47CQ5HY64 1035 aa10.11□□□□□ -0.79
DDX56-211ENST00000479602 ARHGEF16Q5VV41 709 aa10.11□□□□□ -0.79
DDX56-211ENST00000479602 ATL3Q6DD88 541 aa10.11□□□□□ -0.79
DDX56-211ENST00000479602 SERINC5Q86VE9 423 aa10.11□□□□□ -0.79
DDX56-211ENST00000479602 LENG9Q96B70 501 aa10.11□□□□□ -0.79
DDX56-211ENST00000479602 AIFM3Q96NN9 605 aa10.11□□□□□ -0.79
DDX56-211ENST00000479602 ZSCAN16Q9H4T2 348 aaPredicted RBP10.11□□□□□ -0.79
DDX56-211ENST00000479602 SCN5AQ14524 2016 aa10.11□□□□□ -0.79
DDX56-211ENST00000479602 TRIP12Q14669 1992 aaPredicted RBP10.1□□□□□ -0.79
DDX56-211ENST00000479602 MYH15Q9Y2K3 1946 aa10.1□□□□□ -0.79
DDX56-211ENST00000479602 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.1□□□□□ -0.79
DDX56-211ENST00000479602 ABHD14A-ACY1A0A1B0GW23 586 aa10.1□□□□□ -0.79
DDX56-211ENST00000479602 LCHNA4D1U4 455 aa10.1□□□□□ -0.79
DDX56-211ENST00000479602 LAD1O00515 517 aa10.1□□□□□ -0.79
DDX56-211ENST00000479602 GJB5O95377 273 aa10.1□□□□□ -0.79
DDX56-211ENST00000479602 BMP15O95972 392 aa10.1□□□□□ -0.79
DDX56-211ENST00000479602 EIF2AK2P19525 551 aaKnown RBP10.1□□□□□ -0.79
DDX56-211ENST00000479602 SYT1P21579 422 aa10.1□□□□□ -0.79
DDX56-211ENST00000479602 HOXA13P31271 388 aaPredicted RBP10.1□□□□□ -0.79
DDX56-211ENST00000479602 ERVK-21P61565 698 aa10.1□□□□□ -0.79
DDX56-211ENST00000479602 ZNF200P98182 395 aaPredicted RBP10.1□□□□□ -0.79
DDX56-211ENST00000479602 TFF2Q03403 129 aa10.1□□□□□ -0.79
DDX56-211ENST00000479602 SEMA3FQ13275 785 aa10.1□□□□□ -0.79
DDX56-211ENST00000479602 GRB10Q13322 594 aa10.1□□□□□ -0.79
DDX56-211ENST00000479602 KIAA0753Q2KHM9 967 aa10.1□□□□□ -0.79
DDX56-211ENST00000479602 LARP1BQ659C4 914 aaKnown RBP10.1□□□□□ -0.79
DDX56-211ENST00000479602 CNKSR3Q6P9H4 555 aa10.1□□□□□ -0.79
DDX56-211ENST00000479602 LRRC8DQ7L1W4 858 aa10.1□□□□□ -0.79
DDX56-211ENST00000479602 NEK8Q86SG6 692 aa10.1□□□□□ -0.79
DDX56-211ENST00000479602 IL31RAQ8NI17 732 aa10.1□□□□□ -0.79
DDX56-211ENST00000479602 JADE2Q9NQC1 790 aa10.1□□□□□ -0.79
DDX56-211ENST00000479602 MYO7AQ13402 2215 aa10.09□□□□□ -0.79
DDX56-211ENST00000479602 CCDC194A0A1B0GVG4 234 aa10.09□□□□□ -0.79
DDX56-211ENST00000479602 SPATA31C2B4DYI2 1134 aa10.09□□□□□ -0.79
DDX56-211ENST00000479602 KIF28PB7ZC32 967 aa10.09□□□□□ -0.79
DDX56-211ENST00000479602 STX6O43752 255 aa10.09□□□□□ -0.79
DDX56-211ENST00000479602 EDIL3O43854 480 aa10.09□□□□□ -0.79
DDX56-211ENST00000479602 UBA1P22314 1058 aaKnown RBP10.09□□□□□ -0.79
DDX56-211ENST00000479602 DEFB103AP81534 67 aa10.09□□□□□ -0.79
DDX56-211ENST00000479602 HTRA4P83105 476 aaPredicted RBP10.09□□□□□ -0.79
DDX56-211ENST00000479602 MFSD10Q14728 455 aa10.09□□□□□ -0.79
DDX56-211ENST00000479602 UBE2SQ16763 222 aa10.09□□□□□ -0.79
DDX56-211ENST00000479602 ZNF618Q5T7W0 954 aa10.09□□□□□ -0.79
DDX56-211ENST00000479602 B3GNT9Q6UX72 402 aa10.09□□□□□ -0.79
DDX56-211ENST00000479602 NLRX1Q86UT6 975 aa10.09□□□□□ -0.79
DDX56-211ENST00000479602 DHX37Q8IY37 1157 aaKnown RBP10.09□□□□□ -0.79
DDX56-211ENST00000479602 C7orf31Q8N865 590 aa10.09□□□□□ -0.79
DDX56-211ENST00000479602 RDM1Q8NG50 284 aa10.09□□□□□ -0.79
DDX56-211ENST00000479602 SP7Q8TDD2 431 aaPredicted RBP10.09□□□□□ -0.79
DDX56-211ENST00000479602 FAM20AQ96MK3 541 aa10.09□□□□□ -0.79
DDX56-211ENST00000479602 UHRF1Q96T88 793 aaPredicted RBP10.09□□□□□ -0.79
DDX56-211ENST00000479602 RIT2Q99578 217 aa10.09□□□□□ -0.79
DDX56-211ENST00000479602 RAD9AQ99638 391 aa10.09□□□□□ -0.79
DDX56-211ENST00000479602 MXRA8Q9BRK3 442 aa10.09□□□□□ -0.79
DDX56-211ENST00000479602 OSBPL7Q9BZF2 842 aa10.09□□□□□ -0.79
DDX56-211ENST00000479602 FTOQ9C0B1 505 aaKnown RBP eCLIP10.09□□□□□ -0.79
DDX56-211ENST00000479602 SUGCTQ9HAC7 445 aa10.09□□□□□ -0.79
DDX56-211ENST00000479602 KCNMB3Q9NPA1 279 aa10.09□□□□□ -0.79
DDX56-211ENST00000479602 COG5Q9UP83 839 aa10.09□□□□□ -0.79
DDX56-211ENST00000479602 MTMR6Q9Y217 621 aa10.09□□□□□ -0.79
DDX56-211ENST00000479602 MRVI1Q9Y6F6 885 aa10.09□□□□□ -0.79
DDX56-211ENST00000479602 BTBD18B2RXH4 712 aa10.08□□□□□ -0.8
DDX56-211ENST00000479602 SLC26A4O43511 780 aa10.08□□□□□ -0.8
DDX56-211ENST00000479602 EFCAB14O75071 495 aa10.08□□□□□ -0.8
DDX56-211ENST00000479602 BRD1O95696 1058 aa10.08□□□□□ -0.8
DDX56-211ENST00000479602 ITGB5P18084 799 aa10.08□□□□□ -0.8
DDX56-211ENST00000479602 PRPHP41219 470 aa10.08□□□□□ -0.8
DDX56-211ENST00000479602 KCNQ1P51787 676 aa10.08□□□□□ -0.8
DDX56-211ENST00000479602 NEDD9Q14511 834 aa10.08□□□□□ -0.8
DDX56-211ENST00000479602 PLEKHG4Q58EX7 1191 aa10.08□□□□□ -0.8
DDX56-211ENST00000479602 METTL7BQ6UX53 244 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms