RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 MARCH8Q5T0T0 291 aa19.85■□□□□ 0.77
ECHDC1-216ENST00000479525 PPP1R18Q6NYC8 613 aa19.85■□□□□ 0.77
ECHDC1-216ENST00000479525 TRMT1LQ7Z2T5 733 aaKnown RBP19.85■□□□□ 0.77
ECHDC1-216ENST00000479525 SEPT8Q92599 483 aa19.85■□□□□ 0.77
ECHDC1-216ENST00000479525 RAD9AQ99638 391 aa19.85■□□□□ 0.77
ECHDC1-216ENST00000479525 AGO4Q9HCK5 861 aaKnown RBP19.85■□□□□ 0.77
ECHDC1-216ENST00000479525 TUBE1Q9UJT0 475 aa19.85■□□□□ 0.77
ECHDC1-216ENST00000479525 MUC3AQ02505 3323 aa19.85■□□□□ 0.77
ECHDC1-216ENST00000479525 NRCAMQ92823 1304 aa19.84■□□□□ 0.77
ECHDC1-216ENST00000479525 AMHP03971 560 aa19.84■□□□□ 0.77
ECHDC1-216ENST00000479525 SCG2P13521 617 aa19.84■□□□□ 0.77
ECHDC1-216ENST00000479525 INSRRP14616 1297 aa19.84■□□□□ 0.77
ECHDC1-216ENST00000479525 ACTR2P61160 394 aa19.84■□□□□ 0.77
ECHDC1-216ENST00000479525 PKN1Q16512 942 aa19.84■□□□□ 0.77
ECHDC1-216ENST00000479525 PFKFB3Q16875 520 aaPredicted RBP19.84■□□□□ 0.77
ECHDC1-216ENST00000479525 ASB2Q96Q27 587 aa19.84■□□□□ 0.77
ECHDC1-216ENST00000479525 SMARCAD1Q9H4L7 1026 aa19.84■□□□□ 0.77
ECHDC1-216ENST00000479525 SUGCTQ9HAC7 445 aa19.84■□□□□ 0.77
ECHDC1-216ENST00000479525 ERAP1Q9NZ08 941 aa19.84■□□□□ 0.77
ECHDC1-216ENST00000479525 TRPC6Q9Y210 931 aa19.84■□□□□ 0.77
ECHDC1-216ENST00000479525 FAM86B1E9PN63 330 aa19.83■□□□□ 0.77
ECHDC1-216ENST00000479525 HMGB1P09429 215 aaKnown RBP19.83■□□□□ 0.77
ECHDC1-216ENST00000479525 FAM86B2P0C5J1 330 aa19.83■□□□□ 0.77
ECHDC1-216ENST00000479525 IBSPP21815 317 aaPredicted RBP19.83■□□□□ 0.77
ECHDC1-216ENST00000479525 SREBF1P36956 1147 aa19.83■□□□□ 0.77
ECHDC1-216ENST00000479525 PLCB4Q15147 1175 aa19.83■□□□□ 0.77
ECHDC1-216ENST00000479525 CEP55Q53EZ4 464 aa19.83■□□□□ 0.77
ECHDC1-216ENST00000479525 SDF4Q9BRK5 362 aa19.83■□□□□ 0.77
ECHDC1-216ENST00000479525 SLC26A6Q9BXS9 759 aa19.83■□□□□ 0.77
ECHDC1-216ENST00000479525 IFIH1Q9BYX4 1025 aaKnown RBP19.83■□□□□ 0.77
ECHDC1-216ENST00000479525 CDY2AQ9Y6F7 541 aa19.83■□□□□ 0.77
ECHDC1-216ENST00000479525 CSPG5O95196 566 aa19.83■□□□□ 0.76
ECHDC1-216ENST00000479525 CCNE2O96020 404 aa19.83■□□□□ 0.76
ECHDC1-216ENST00000479525 MGAT3Q09327 533 aa19.83■□□□□ 0.76
ECHDC1-216ENST00000479525 LPIN1Q14693 890 aa19.83■□□□□ 0.76
ECHDC1-216ENST00000479525 PLA2G4DQ86XP0 818 aa19.83■□□□□ 0.76
ECHDC1-216ENST00000479525 TGS1Q96RS0 853 aaKnown RBP19.83■□□□□ 0.76
ECHDC1-216ENST00000479525 VPS54Q9P1Q0 977 aa19.83■□□□□ 0.76
ECHDC1-216ENST00000479525 RALGAPA2Q2PPJ7 1873 aa19.82■□□□□ 0.76
ECHDC1-216ENST00000479525 MRPS5P82675 430 aaKnown RBP19.82■□□□□ 0.76
ECHDC1-216ENST00000479525 FAM26DQ5JW98 314 aa19.82■□□□□ 0.76
ECHDC1-216ENST00000479525 ADAMTS19Q8TE59 1207 aa19.82■□□□□ 0.76
ECHDC1-216ENST00000479525 ATXN2LQ8WWM7 1075 aaKnown RBP19.82■□□□□ 0.76
ECHDC1-216ENST00000479525 PPP1R16BQ96T49 567 aa19.82■□□□□ 0.76
ECHDC1-216ENST00000479525 MEIS1O00470 390 aa19.81■□□□□ 0.76
ECHDC1-216ENST00000479525 EFCAB14O75071 495 aa19.81■□□□□ 0.76
ECHDC1-216ENST00000479525 FOSP01100 380 aaPredicted RBP19.81■□□□□ 0.76
ECHDC1-216ENST00000479525 ERVK-21P61565 698 aa19.81■□□□□ 0.76
ECHDC1-216ENST00000479525 STK3Q13188 491 aa19.81■□□□□ 0.76
ECHDC1-216ENST00000479525 AP3B2Q13367 1082 aa19.81■□□□□ 0.76
ECHDC1-216ENST00000479525 TOB2Q14106 344 aaPredicted RBP19.81■□□□□ 0.76
ECHDC1-216ENST00000479525 NTRK3Q16288 839 aa19.81■□□□□ 0.76
ECHDC1-216ENST00000479525 YME1L1Q96TA2 773 aa19.81■□□□□ 0.76
ECHDC1-216ENST00000479525 UPF3BQ9BZI7 483 aaKnown RBP19.81■□□□□ 0.76
ECHDC1-216ENST00000479525 AZI2Q9H6S1 392 aa19.81■□□□□ 0.76
ECHDC1-216ENST00000479525 AGO3Q9H9G7 860 aaKnown RBP19.81■□□□□ 0.76
ECHDC1-216ENST00000479525 NFASCO94856 1347 aa19.8■□□□□ 0.76
ECHDC1-216ENST00000479525 hCG_1984214I3L0E3 225 aa19.8■□□□□ 0.76
ECHDC1-216ENST00000479525 BACH1O14867 736 aa19.8■□□□□ 0.76
ECHDC1-216ENST00000479525 PDIA3P30101 505 aaKnown RBP19.8■□□□□ 0.76
ECHDC1-216ENST00000479525 STAT5BP51692 787 aa19.8■□□□□ 0.76
ECHDC1-216ENST00000479525 CCDC60Q8IWA6 550 aaPredicted RBP19.8■□□□□ 0.76
ECHDC1-216ENST00000479525 ZNF713Q8N859 430 aaPredicted RBP19.8■□□□□ 0.76
ECHDC1-216ENST00000479525 FBXO22Q8NEZ5 403 aa19.8■□□□□ 0.76
ECHDC1-216ENST00000479525 SYMPKQ92797 1274 aaKnown RBP19.8■□□□□ 0.76
ECHDC1-216ENST00000479525 GJA10Q969M2 543 aa19.8■□□□□ 0.76
ECHDC1-216ENST00000479525 TOP1MTQ969P6 601 aa19.8■□□□□ 0.76
ECHDC1-216ENST00000479525 INSL6Q9Y581 213 aa19.8■□□□□ 0.76
ECHDC1-216ENST00000479525 NID2Q14112 1375 aa19.79■□□□□ 0.76
ECHDC1-216ENST00000479525 COL4A6Q14031 1691 aa19.79■□□□□ 0.76
ECHDC1-216ENST00000479525 IGLV3-22A0A075B6J6 115 aa19.79■□□□□ 0.76
ECHDC1-216ENST00000479525 MBLAC1A4D2B0 266 aaPredicted RBP19.79■□□□□ 0.76
ECHDC1-216ENST00000479525 MAFGO15525 162 aa19.79■□□□□ 0.76
ECHDC1-216ENST00000479525 PRPF3O43395 683 aaKnown RBP19.79■□□□□ 0.76
ECHDC1-216ENST00000479525 CAND2O75155 1236 aa19.79■□□□□ 0.76
ECHDC1-216ENST00000479525 REC8O95072 547 aa19.79■□□□□ 0.76
ECHDC1-216ENST00000479525 CD52P31358 61 aa19.79■□□□□ 0.76
ECHDC1-216ENST00000479525 MRPS6P82932 125 aaKnown RBP19.79■□□□□ 0.76
ECHDC1-216ENST00000479525 HTRA4P83105 476 aaPredicted RBP19.79■□□□□ 0.76
ECHDC1-216ENST00000479525 FBXO47Q5MNV8 452 aa19.79■□□□□ 0.76
ECHDC1-216ENST00000479525 LINC01599Q8WXQ3 324 aa19.79■□□□□ 0.76
ECHDC1-216ENST00000479525 ZMYND12Q9H0C1 365 aa19.79■□□□□ 0.76
ECHDC1-216ENST00000479525 BRWD1Q9NSI6 2320 aa19.78■□□□□ 0.76
ECHDC1-216ENST00000479525 TTC3P53804 2025 aa19.78■□□□□ 0.76
ECHDC1-216ENST00000479525 CCDC196A0A1B0GTZ2 297 aa19.78■□□□□ 0.76
ECHDC1-216ENST00000479525 POTEB3A0JP26 581 aa19.78■□□□□ 0.76
ECHDC1-216ENST00000479525 POU3F3P20264 500 aaPredicted RBP19.78■□□□□ 0.76
ECHDC1-216ENST00000479525 RCAN1P53805 252 aa19.78■□□□□ 0.76
ECHDC1-216ENST00000479525 AKAP17AQ02040 695 aaKnown RBP19.78■□□□□ 0.76
ECHDC1-216ENST00000479525 TMEM266Q2M3C6 531 aa19.78■□□□□ 0.76
ECHDC1-216ENST00000479525 TAF2Q6P1X5 1199 aa19.78■□□□□ 0.76
ECHDC1-216ENST00000479525 POTEBQ6S5H4 581 aa19.78■□□□□ 0.76
ECHDC1-216ENST00000479525 REXO1Q8N1G1 1221 aaKnown RBP19.78■□□□□ 0.76
ECHDC1-216ENST00000479525 IL27Q8NEV9 243 aa19.78■□□□□ 0.76
ECHDC1-216ENST00000479525 AIFM3Q96NN9 605 aa19.78■□□□□ 0.76
ECHDC1-216ENST00000479525 UHRF1Q96T88 793 aaPredicted RBP19.78■□□□□ 0.76
ECHDC1-216ENST00000479525 AGXT2Q9BYV1 514 aa19.78■□□□□ 0.76
ECHDC1-216ENST00000479525 TSPYL2Q9H2G4 693 aaPredicted RBP19.78■□□□□ 0.76
ECHDC1-216ENST00000479525 C6orf50Q9HD87 102 aa19.78■□□□□ 0.76
ECHDC1-216ENST00000479525 GINS2Q9Y248 185 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms