RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 CD4P01730 458 aa7.79□□□□□ -1.16
BRCA1-215ENST00000478531 ITGB8P26012 769 aa7.79□□□□□ -1.16
BRCA1-215ENST00000478531 MAGEA10P43363 369 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-215ENST00000478531 IGBP1P78318 339 aa7.79□□□□□ -1.16
BRCA1-215ENST00000478531 ZNF200P98182 395 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-215ENST00000478531 FAM160B1Q5W0V3 765 aa7.79□□□□□ -1.16
BRCA1-215ENST00000478531 ZNF746Q6NUN9 644 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-215ENST00000478531 MIS18BP1Q6P0N0 1132 aa7.79□□□□□ -1.16
BRCA1-215ENST00000478531 CCDC60Q8IWA6 550 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-215ENST00000478531 SMAP1Q8IYB5 467 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-215ENST00000478531 MBOAT7Q96N66 472 aa7.79□□□□□ -1.16
BRCA1-215ENST00000478531 PCYT2Q99447 389 aa7.79□□□□□ -1.16
BRCA1-215ENST00000478531 RIT2Q99578 217 aa7.79□□□□□ -1.16
BRCA1-215ENST00000478531 SEZ6LQ9BYH1 1024 aa7.79□□□□□ -1.16
BRCA1-215ENST00000478531 UNC45AQ9H3U1 944 aa7.79□□□□□ -1.16
BRCA1-215ENST00000478531 HIPK3Q9H422 1215 aa7.79□□□□□ -1.16
BRCA1-215ENST00000478531 SMARCAD1Q9H4L7 1026 aa7.79□□□□□ -1.16
BRCA1-215ENST00000478531 ZNF302Q9NR11 478 aa7.79□□□□□ -1.16
BRCA1-215ENST00000478531 ERAP1Q9NZ08 941 aa7.79□□□□□ -1.16
BRCA1-215ENST00000478531 GTF2IRD1Q9UHL9 959 aa7.79□□□□□ -1.16
BRCA1-215ENST00000478531 TBX21Q9UL17 535 aa7.79□□□□□ -1.16
BRCA1-215ENST00000478531 NOL7Q9UMY1 257 aaKnown RBP7.79□□□□□ -1.16
BRCA1-215ENST00000478531 ARID2Q68CP9 1835 aa7.78□□□□□ -1.16
BRCA1-215ENST00000478531 C17orf102A2RUQ5 167 aa7.78□□□□□ -1.16
BRCA1-215ENST00000478531 SPDYE4A6NLX3 237 aa7.78□□□□□ -1.16
BRCA1-215ENST00000478531 LGR5O75473 907 aa7.78□□□□□ -1.16
BRCA1-215ENST00000478531 PSMD10O75832 226 aa7.78□□□□□ -1.16
BRCA1-215ENST00000478531 PSAPP07602 524 aa7.78□□□□□ -1.16
BRCA1-215ENST00000478531 U2AF2P26368 475 aaKnown RBP eCLIP7.78□□□□□ -1.161e-6■■■□□ 19.1
BRCA1-215ENST00000478531 CYP2C18P33260 490 aa7.78□□□□□ -1.16
BRCA1-215ENST00000478531 STAT5BP51692 787 aa7.78□□□□□ -1.16
BRCA1-215ENST00000478531 PPFIA1Q13136 1202 aa7.78□□□□□ -1.16
BRCA1-215ENST00000478531 ZNF174Q15697 407 aa7.78□□□□□ -1.16
BRCA1-215ENST00000478531 CALCRLQ16602 461 aa7.78□□□□□ -1.16
BRCA1-215ENST00000478531 TTC38Q5R3I4 469 aa7.78□□□□□ -1.16
BRCA1-215ENST00000478531 SWSAP1Q6NVH7 229 aa7.78□□□□□ -1.16
BRCA1-215ENST00000478531 PDXDC2PQ6P474 469 aa7.78□□□□□ -1.16
BRCA1-215ENST00000478531 ABHD15Q6UXT9 468 aa7.78□□□□□ -1.16
BRCA1-215ENST00000478531 MIER3Q7Z3K6 550 aa7.78□□□□□ -1.16
BRCA1-215ENST00000478531 FERMT3Q86UX7 667 aa7.78□□□□□ -1.16
BRCA1-215ENST00000478531 CKAP2LQ8IYA6 745 aa7.78□□□□□ -1.16
BRCA1-215ENST00000478531 HAS1Q92839 578 aa7.78□□□□□ -1.16
BRCA1-215ENST00000478531 BADQ92934 168 aa7.78□□□□□ -1.16
BRCA1-215ENST00000478531 ATP6V0A1Q93050 837 aa7.78□□□□□ -1.16
BRCA1-215ENST00000478531 INTS4Q96HW7 963 aaKnown RBP7.78□□□□□ -1.16
BRCA1-215ENST00000478531 RNPEPQ9H4A4 650 aa7.78□□□□□ -1.16
BRCA1-215ENST00000478531 KCNMB3Q9NPA1 279 aa7.78□□□□□ -1.16
BRCA1-215ENST00000478531 DISC1Q9NRI5 854 aa7.78□□□□□ -1.16
BRCA1-215ENST00000478531 SETD4Q9NVD3 440 aa7.78□□□□□ -1.16
BRCA1-215ENST00000478531 GABBR1Q9UBS5 961 aa7.78□□□□□ -1.16
BRCA1-215ENST00000478531 PCDHA10Q9Y5I2 948 aa7.78□□□□□ -1.16
BRCA1-215ENST00000478531 UMODL1Q5DID0 1318 aa7.78□□□□□ -1.16
BRCA1-215ENST00000478531 SIP14410 1827 aa7.78□□□□□ -1.16
BRCA1-215ENST00000478531 KIAA0355O15063 1070 aa7.77□□□□□ -1.17
BRCA1-215ENST00000478531 BAG4O95429 457 aaKnown RBP7.77□□□□□ -1.17
BRCA1-215ENST00000478531 PDCP20941 246 aa7.77□□□□□ -1.17
BRCA1-215ENST00000478531 JAK3P52333 1124 aa7.77□□□□□ -1.17
BRCA1-215ENST00000478531 CCL23P55773 120 aa7.77□□□□□ -1.17
BRCA1-215ENST00000478531 PTPN11Q06124 597 aaPredicted RBP7.77□□□□□ -1.17
BRCA1-215ENST00000478531 HIC1Q14526 733 aa7.77□□□□□ -1.17
BRCA1-215ENST00000478531 UGCGQ16739 394 aa7.77□□□□□ -1.17
BRCA1-215ENST00000478531 NCAPH2Q6IBW4 605 aa7.77□□□□□ -1.17
BRCA1-215ENST00000478531 SESTD1Q86VW0 696 aa7.77□□□□□ -1.17
BRCA1-215ENST00000478531 LMBR1Q8WVP7 490 aa7.77□□□□□ -1.17
BRCA1-215ENST00000478531 FAM20AQ96MK3 541 aa7.77□□□□□ -1.17
BRCA1-215ENST00000478531 NOC4LQ9BVI4 516 aaKnown RBP7.77□□□□□ -1.17
BRCA1-215ENST00000478531 VAV3Q9UKW4 847 aa7.77□□□□□ -1.17
BRCA1-215ENST00000478531 CHD9Q3L8U1 2897 aa7.77□□□□□ -1.17
BRCA1-215ENST00000478531 TET1Q8NFU7 2136 aa7.77□□□□□ -1.17
BRCA1-215ENST00000478531 POTEB3A0JP26 581 aa7.77□□□□□ -1.17
BRCA1-215ENST00000478531 TBX3O15119 743 aa7.77□□□□□ -1.17
BRCA1-215ENST00000478531 TREHO43280 583 aa7.77□□□□□ -1.17
BRCA1-215ENST00000478531 ATG7O95352 703 aa7.77□□□□□ -1.17
BRCA1-215ENST00000478531 TIMP1P01033 207 aa7.77□□□□□ -1.17
BRCA1-215ENST00000478531 SFNP31947 248 aa7.77□□□□□ -1.17
BRCA1-215ENST00000478531 TXKP42681 527 aa7.77□□□□□ -1.17
BRCA1-215ENST00000478531 PRKCEQ02156 737 aa7.77□□□□□ -1.17
BRCA1-215ENST00000478531 PLCB4Q15147 1175 aa7.77□□□□□ -1.17
BRCA1-215ENST00000478531 GRIK4Q16099 956 aa7.77□□□□□ -1.17
BRCA1-215ENST00000478531 POTEBQ6S5H4 581 aa7.77□□□□□ -1.17
BRCA1-215ENST00000478531 PLPPR4Q7Z2D5 763 aa7.77□□□□□ -1.17
BRCA1-215ENST00000478531 SLFN12Q8IYM2 578 aa7.77□□□□□ -1.17
BRCA1-215ENST00000478531 BANK1Q8NDB2 785 aa7.77□□□□□ -1.17
BRCA1-215ENST00000478531 TRAPPC12Q8WVT3 735 aa7.77□□□□□ -1.17
BRCA1-215ENST00000478531 ZBTB10Q96DT7 871 aa7.77□□□□□ -1.17
BRCA1-215ENST00000478531 SCLYQ96I15 445 aa7.77□□□□□ -1.17
BRCA1-215ENST00000478531 CTAGE1Q96RT6 745 aa7.77□□□□□ -1.17
BRCA1-215ENST00000478531 UBE2OQ9C0C9 1292 aaKnown RBP7.77□□□□□ -1.17
BRCA1-215ENST00000478531 TMEM60Q9H2L4 133 aa7.77□□□□□ -1.17
BRCA1-215ENST00000478531 TUBE1Q9UJT0 475 aa7.77□□□□□ -1.17
BRCA1-215ENST00000478531 PCDHB6Q9Y5E3 794 aa7.77□□□□□ -1.17
BRCA1-215ENST00000478531 IGSF9BQ9UPX0 1349 aa7.77□□□□□ -1.17
BRCA1-215ENST00000478531 IGKV6D-21A0A0A0MT36 114 aa7.76□□□□□ -1.17
BRCA1-215ENST00000478531 RBAK-RBAKDNI3L0D1 243 aa7.76□□□□□ -1.17
BRCA1-215ENST00000478531 EML1O00423 815 aa7.76□□□□□ -1.17
BRCA1-215ENST00000478531 GNAT1P11488 350 aa7.76□□□□□ -1.17
BRCA1-215ENST00000478531 INSRRP14616 1297 aa7.76□□□□□ -1.17
BRCA1-215ENST00000478531 SYT1P21579 422 aa7.76□□□□□ -1.17
BRCA1-215ENST00000478531 TRAPPC10P48553 1259 aa7.76□□□□□ -1.17
BRCA1-215ENST00000478531 TOB1P50616 345 aaPredicted RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms