RNA–Protein interactions for RNA: ENST00000478223.2

SKI-202, Transcript of SKI proto-oncogene, humanhuman

TSL 3

Gene SKI, Length 294 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-202ENST00000478223 PRR16Q569H4 304 aa13.3□□□□□ -0.28
SKI-202ENST00000478223 MARCH8Q5T0T0 291 aa13.3□□□□□ -0.28
SKI-202ENST00000478223 ZNF697Q5TEC3 545 aa13.3□□□□□ -0.28
SKI-202ENST00000478223 CPLX2Q6PUV4 134 aaKnown RBP13.3□□□□□ -0.28
SKI-202ENST00000478223 CCDC155Q8N6L0 562 aa13.3□□□□□ -0.28
SKI-202ENST00000478223 NSUN7Q8NE18 718 aaKnown RBP13.3□□□□□ -0.28
SKI-202ENST00000478223 OXER1Q8TDS5 423 aa13.3□□□□□ -0.28
SKI-202ENST00000478223 TBCKQ8TEA7 893 aa13.3□□□□□ -0.28
SKI-202ENST00000478223 TRAPPC12Q8WVT3 735 aa13.3□□□□□ -0.28
SKI-202ENST00000478223 GLG1Q92896 1179 aa13.3□□□□□ -0.28
SKI-202ENST00000478223 PHF20Q9BVI0 1012 aa13.3□□□□□ -0.28
SKI-202ENST00000478223 YBX2Q9Y2T7 364 aaKnown RBP13.3□□□□□ -0.28
SKI-202ENST00000478223 TTC3P53804 2025 aa13.29□□□□□ -0.28
SKI-202ENST00000478223 IGKV6D-21A0A0A0MT36 114 aa13.29□□□□□ -0.28
SKI-202ENST00000478223 FAM205CA6NFA0 338 aa13.29□□□□□ -0.28
SKI-202ENST00000478223 IPO5O00410 1097 aaKnown RBP13.29□□□□□ -0.28
SKI-202ENST00000478223 CDKL5O76039 1030 aa13.29□□□□□ -0.28
SKI-202ENST00000478223 TDP2O95551 362 aa13.29□□□□□ -0.28
SKI-202ENST00000478223 CXCL10P02778 98 aa13.29□□□□□ -0.28
SKI-202ENST00000478223 PFKMP08237 780 aa13.29□□□□□ -0.28
SKI-202ENST00000478223 CTSHP09668 335 aa13.29□□□□□ -0.28
SKI-202ENST00000478223 MYOGP15173 224 aa13.29□□□□□ -0.28
SKI-202ENST00000478223 PPFIA1Q13136 1202 aa13.29□□□□□ -0.28
SKI-202ENST00000478223 PLCB4Q15147 1175 aa13.29□□□□□ -0.28
SKI-202ENST00000478223 GRIK4Q16099 956 aa13.29□□□□□ -0.28
SKI-202ENST00000478223 EARS2Q5JPH6 523 aaKnown RBP13.29□□□□□ -0.28
SKI-202ENST00000478223 MCTP2Q6DN12 878 aa13.29□□□□□ -0.28
SKI-202ENST00000478223 ABHD15Q6UXT9 468 aa13.29□□□□□ -0.28
SKI-202ENST00000478223 TMCO2Q7Z6W1 182 aaPredicted RBP13.29□□□□□ -0.28
SKI-202ENST00000478223 CCDC60Q8IWA6 550 aaPredicted RBP13.29□□□□□ -0.28
SKI-202ENST00000478223 ZNF577Q9BSK1 485 aa13.29□□□□□ -0.28
SKI-202ENST00000478223 FTOQ9C0B1 505 aaKnown RBP eCLIP13.29□□□□□ -0.28
SKI-202ENST00000478223 SEMA6BQ9H3T3 888 aa13.29□□□□□ -0.28
SKI-202ENST00000478223 SMARCAD1Q9H4L7 1026 aa13.29□□□□□ -0.28
SKI-202ENST00000478223 ERAP1Q9NZ08 941 aa13.29□□□□□ -0.28
SKI-202ENST00000478223 ORC3Q9UBD5 711 aaPredicted RBP13.29□□□□□ -0.28
SKI-202ENST00000478223 MSH4O15457 936 aa13.28□□□□□ -0.28
SKI-202ENST00000478223 ATP4AP20648 1035 aa13.28□□□□□ -0.28
SKI-202ENST00000478223 FOSBP53539 338 aa13.28□□□□□ -0.28
SKI-202ENST00000478223 IGBP1P78318 339 aa13.28□□□□□ -0.28
SKI-202ENST00000478223 SETQ01105 290 aaPredicted RBP13.28□□□□□ -0.28
SKI-202ENST00000478223 SLC4A7Q9Y6M7 1214 aa13.28□□□□□ -0.28
SKI-202ENST00000478223 NRCAMQ92823 1304 aa13.28□□□□□ -0.28
SKI-202ENST00000478223 COL4A6Q14031 1691 aa13.28□□□□□ -0.28
SKI-202ENST00000478223 INSRRP14616 1297 aa13.27□□□□□ -0.29
SKI-202ENST00000478223 STAT5BP51692 787 aa13.27□□□□□ -0.29
SKI-202ENST00000478223 USP11P51784 963 aa13.27□□□□□ -0.29
SKI-202ENST00000478223 DEFB103AP81534 67 aa13.27□□□□□ -0.29
SKI-202ENST00000478223 INF2Q27J81 1249 aa13.27□□□□□ -0.29
SKI-202ENST00000478223 TIFAQ96CG3 184 aa13.27□□□□□ -0.29
SKI-202ENST00000478223 C22orf23Q9BZE7 217 aa13.27□□□□□ -0.29
SKI-202ENST00000478223 NKX2-4Q9H2Z4 354 aa13.27□□□□□ -0.29
SKI-202ENST00000478223 TUBE1Q9UJT0 475 aa13.27□□□□□ -0.29
SKI-202ENST00000478223 MBLAC1A4D2B0 266 aaPredicted RBP13.26□□□□□ -0.29
SKI-202ENST00000478223 RSPH10B2B2RC85 870 aa13.26□□□□□ -0.29
SKI-202ENST00000478223 SLC37A4O43826 429 aa13.26□□□□□ -0.29
SKI-202ENST00000478223 EIF5BO60841 1220 aaKnown RBP13.26□□□□□ -0.29
SKI-202ENST00000478223 ARHGEF15O94989 841 aa13.26□□□□□ -0.29
SKI-202ENST00000478223 CHRNA1P02708 482 aa13.26□□□□□ -0.29
SKI-202ENST00000478223 RSPH10BP0C881 870 aa13.26□□□□□ -0.29
SKI-202ENST00000478223 GNAT1P11488 350 aa13.26□□□□□ -0.29
SKI-202ENST00000478223 ACTN1P12814 892 aa13.26□□□□□ -0.29
SKI-202ENST00000478223 ATP2A2P16615 1042 aaKnown RBP13.26□□□□□ -0.29
SKI-202ENST00000478223 RBM25P49756 843 aaKnown RBP13.26□□□□□ -0.29
SKI-202ENST00000478223 WDR5P61964 334 aaKnown RBP13.26□□□□□ -0.29
SKI-202ENST00000478223 MGAT3Q09327 533 aa13.26□□□□□ -0.29
SKI-202ENST00000478223 NR5A1Q13285 461 aa13.26□□□□□ -0.29
SKI-202ENST00000478223 MKRN4PQ13434 485 aaPredicted RBP13.26□□□□□ -0.29
SKI-202ENST00000478223 GRIN2CQ14957 1233 aa13.26□□□□□ -0.29
SKI-202ENST00000478223 Q4G0T1 1027 aa13.26□□□□□ -0.29
SKI-202ENST00000478223 CNKSR3Q6P9H4 555 aa13.26□□□□□ -0.29
SKI-202ENST00000478223 PLPPR4Q7Z2D5 763 aa13.26□□□□□ -0.29
SKI-202ENST00000478223 CCDC83Q8IWF9 413 aa13.26□□□□□ -0.29
SKI-202ENST00000478223 DNAJB3Q8WWF6 145 aa13.26□□□□□ -0.29
SKI-202ENST00000478223 MYLIPQ8WY64 445 aa13.26□□□□□ -0.29
SKI-202ENST00000478223 SLC5A5Q92911 643 aa13.26□□□□□ -0.29
SKI-202ENST00000478223 TNFRSF25Q93038 417 aa13.26□□□□□ -0.29
SKI-202ENST00000478223 MBOAT7Q96N66 472 aa13.26□□□□□ -0.29
SKI-202ENST00000478223 CDX2Q99626 313 aaPredicted RBP13.26□□□□□ -0.29
SKI-202ENST00000478223 MTIF3Q9H2K0 278 aaKnown RBP13.26□□□□□ -0.29
SKI-202ENST00000478223 UNC45AQ9H3U1 944 aa13.26□□□□□ -0.29
SKI-202ENST00000478223 AZI2Q9H6S1 392 aa13.26□□□□□ -0.29
SKI-202ENST00000478223 ZNF302Q9NR11 478 aa13.26□□□□□ -0.29
SKI-202ENST00000478223 TRPC6Q9Y210 931 aa13.26□□□□□ -0.29
SKI-202ENST00000478223 MYH15Q9Y2K3 1946 aa13.26□□□□□ -0.29
SKI-202ENST00000478223 PLXNA4Q9HCM2 1894 aa13.25□□□□□ -0.29
SKI-202ENST00000478223 IGSF9BQ9UPX0 1349 aa13.25□□□□□ -0.29
SKI-202ENST00000478223 CYP3A7-CYP3A51PA0A087WV96 503 aa13.25□□□□□ -0.29
SKI-202ENST00000478223 POTEB3A0JP26 581 aa13.25□□□□□ -0.29
SKI-202ENST00000478223 ZBTB42B2RXF5 422 aa13.25□□□□□ -0.29
SKI-202ENST00000478223 BACH1O14867 736 aa13.25□□□□□ -0.29
SKI-202ENST00000478223 CYP3A7P24462 503 aa13.25□□□□□ -0.29
SKI-202ENST00000478223 NONOQ15233 471 aaKnown RBP eCLIP13.25□□□□□ -0.291e-6■■■■□ 19.7
SKI-202ENST00000478223 UGCGQ16739 394 aa13.25□□□□□ -0.29
SKI-202ENST00000478223 PLEKHG4Q58EX7 1191 aa13.25□□□□□ -0.29
SKI-202ENST00000478223 FAM26DQ5JW98 314 aa13.25□□□□□ -0.29
SKI-202ENST00000478223 GALNT17Q6IS24 598 aa13.25□□□□□ -0.29
SKI-202ENST00000478223 ZNF746Q6NUN9 644 aaPredicted RBP13.25□□□□□ -0.29
SKI-202ENST00000478223 SWSAP1Q6NVH7 229 aa13.25□□□□□ -0.29
SKI-202ENST00000478223 POTEBQ6S5H4 581 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms