RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 CCND2P30279 289 aa8.8□□□□□ -1
VMA21-203ENST00000477649 ABCD1P33897 745 aa8.8□□□□□ -1
VMA21-203ENST00000477649 PSEN1P49768 467 aa8.8□□□□□ -1
VMA21-203ENST00000477649 HMGCS2P54868 508 aa8.8□□□□□ -1
VMA21-203ENST00000477649 MARSP56192 900 aaKnown RBP8.8□□□□□ -1
VMA21-203ENST00000477649 RPS6P62753 249 aaKnown RBP8.8□□□□□ -1
VMA21-203ENST00000477649 MTMR1Q13613 665 aa8.8□□□□□ -1
VMA21-203ENST00000477649 ECM1Q16610 540 aa8.8□□□□□ -1
VMA21-203ENST00000477649 NFIL3Q16649 462 aa8.8□□□□□ -1
VMA21-203ENST00000477649 BMT2Q1RMZ1 405 aa8.8□□□□□ -1
VMA21-203ENST00000477649 TSR1Q2NL82 804 aaKnown RBP8.8□□□□□ -1
VMA21-203ENST00000477649 GNPTABQ3T906 1256 aa8.8□□□□□ -1
VMA21-203ENST00000477649 ARHGEF16Q5VV41 709 aa8.8□□□□□ -1
VMA21-203ENST00000477649 C9orf131Q5VYM1 1079 aa8.8□□□□□ -1
VMA21-203ENST00000477649 ANKRD40Q6AI12 368 aa8.8□□□□□ -1
VMA21-203ENST00000477649 DYMQ7RTS9 669 aa8.8□□□□□ -1
VMA21-203ENST00000477649 KCNK18Q7Z418 384 aa8.8□□□□□ -1
VMA21-203ENST00000477649 PNMA8AQ86V59 439 aaPredicted RBP8.8□□□□□ -1
VMA21-203ENST00000477649 ERO1BQ86YB8 467 aa8.8□□□□□ -1
VMA21-203ENST00000477649 CCAR2Q8N163 923 aaKnown RBP8.8□□□□□ -1
VMA21-203ENST00000477649 DNERQ8NFT8 737 aa8.8□□□□□ -1
VMA21-203ENST00000477649 GOLGA5Q8TBA6 731 aa8.8□□□□□ -1
VMA21-203ENST00000477649 GTF3C2Q8WUA4 911 aaPredicted RBP8.8□□□□□ -1
VMA21-203ENST00000477649 ZKSCAN4Q969J2 545 aaPredicted RBP8.8□□□□□ -1
VMA21-203ENST00000477649 ERGIC2Q96RQ1 377 aa8.8□□□□□ -1
VMA21-203ENST00000477649 RMDN3Q96TC7 470 aa8.8□□□□□ -1
VMA21-203ENST00000477649 MPHOSPH6Q99547 160 aaKnown RBP8.8□□□□□ -1
VMA21-203ENST00000477649 DUSP9Q99956 384 aaKnown RBP8.8□□□□□ -1
VMA21-203ENST00000477649 SENP7Q9BQF6 1050 aa8.8□□□□□ -1
VMA21-203ENST00000477649 PDCD2LQ9BRP1 358 aa8.8□□□□□ -1
VMA21-203ENST00000477649 TUBGCP2Q9BSJ2 902 aa8.8□□□□□ -1
VMA21-203ENST00000477649 EDEM3Q9BZQ6 932 aa8.8□□□□□ -1
VMA21-203ENST00000477649 ZSWIM4Q9H7M6 989 aa8.8□□□□□ -1
VMA21-203ENST00000477649 AGO4Q9HCK5 861 aaKnown RBP8.8□□□□□ -1
VMA21-203ENST00000477649 SLC39A2Q9NP94 309 aa8.8□□□□□ -1
VMA21-203ENST00000477649 PXMP2Q9NR77 195 aa8.8□□□□□ -1
VMA21-203ENST00000477649 KCNH7Q9NS40 1196 aa8.8□□□□□ -1
VMA21-203ENST00000477649 DBR1Q9UK59 544 aaKnown RBP8.8□□□□□ -1
VMA21-203ENST00000477649 FAM184BQ9ULE4 1060 aa8.8□□□□□ -1
VMA21-203ENST00000477649 PFASO15067 1338 aa8.8□□□□□ -1
VMA21-203ENST00000477649 LOC102724159A0A0B4J2E5 919 aa8.79□□□□□ -1
VMA21-203ENST00000477649 A0A1W2PQJ5 194 aa8.79□□□□□ -1
VMA21-203ENST00000477649 PDXKO00764 312 aa8.79□□□□□ -1
VMA21-203ENST00000477649 CALUO43852 315 aaPredicted RBP8.79□□□□□ -1
VMA21-203ENST00000477649 MFAP3LO75121 409 aa8.79□□□□□ -1
VMA21-203ENST00000477649 FCER1AP12319 257 aa8.79□□□□□ -1
VMA21-203ENST00000477649 ITGB5P18084 799 aa8.79□□□□□ -1
VMA21-203ENST00000477649 SCP2P22307 547 aa8.79□□□□□ -1
VMA21-203ENST00000477649 GUCY2CP25092 1073 aa8.79□□□□□ -1
VMA21-203ENST00000477649 STAT3P40763 770 aa8.79□□□□□ -1
VMA21-203ENST00000477649 MTIF2P46199 727 aaKnown RBP8.79□□□□□ -1
VMA21-203ENST00000477649 SNRPFP62306 86 aaKnown RBP8.79□□□□□ -1
VMA21-203ENST00000477649 UBXN1Q04323 297 aa8.79□□□□□ -1
VMA21-203ENST00000477649 VGLL4Q14135 290 aa8.79□□□□□ -1
VMA21-203ENST00000477649 GIT2Q14161 759 aa8.79□□□□□ -1
VMA21-203ENST00000477649 MYBPC2Q14324 1141 aa8.79□□□□□ -1
VMA21-203ENST00000477649 ARID5BQ14865 1188 aa8.79□□□□□ -1
VMA21-203ENST00000477649 PGM5Q15124 567 aa8.79□□□□□ -1
VMA21-203ENST00000477649 PWP2Q15269 919 aaKnown RBP8.79□□□□□ -1
VMA21-203ENST00000477649 PTPN14Q15678 1187 aa8.79□□□□□ -1
VMA21-203ENST00000477649 MAN2A1Q16706 1144 aa8.79□□□□□ -1
VMA21-203ENST00000477649 ZCWPW2Q504Y3 356 aa8.79□□□□□ -1
VMA21-203ENST00000477649 SNRNP48Q6IEG0 339 aaKnown RBP8.79□□□□□ -1
VMA21-203ENST00000477649 ZNF746Q6NUN9 644 aaPredicted RBP8.79□□□□□ -1
VMA21-203ENST00000477649 POTEEQ6S8J3 1075 aa8.79□□□□□ -1
VMA21-203ENST00000477649 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.79□□□□□ -1
VMA21-203ENST00000477649 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.79□□□□□ -1
VMA21-203ENST00000477649 FASTKD5Q7L8L6 764 aaKnown RBP8.79□□□□□ -1
VMA21-203ENST00000477649 ARMC9Q7Z3E5 817 aa8.79□□□□□ -1
VMA21-203ENST00000477649 MIER3Q7Z3K6 550 aa8.79□□□□□ -1
VMA21-203ENST00000477649 VSIG10LQ86VR7 867 aa8.79□□□□□ -1
VMA21-203ENST00000477649 IRF2BP1Q8IU81 584 aa8.79□□□□□ -1
VMA21-203ENST00000477649 TMTC1Q8IUR5 882 aa8.79□□□□□ -1
VMA21-203ENST00000477649 ZC3H3Q8IXZ2 948 aaKnown RBP8.79□□□□□ -1
VMA21-203ENST00000477649 SMAP1Q8IYB5 467 aaPredicted RBP8.79□□□□□ -1
VMA21-203ENST00000477649 TC2NQ8N9U0 490 aa8.79□□□□□ -1
VMA21-203ENST00000477649 ZNF397Q8NF99 534 aaPredicted RBP8.79□□□□□ -1
VMA21-203ENST00000477649 CYP2W1Q8TAV3 490 aa8.79□□□□□ -1
VMA21-203ENST00000477649 TBC1D5Q92609 795 aa8.79□□□□□ -1
VMA21-203ENST00000477649 ATG4CQ96DT6 458 aa8.79□□□□□ -1
VMA21-203ENST00000477649 CNOT6LQ96LI5 555 aaKnown RBP8.79□□□□□ -1
VMA21-203ENST00000477649 NUCKS1Q9H1E3 243 aaKnown RBP8.79□□□□□ -1
VMA21-203ENST00000477649 SEMA6BQ9H3T3 888 aa8.79□□□□□ -1
VMA21-203ENST00000477649 METTL14Q9HCE5 456 aaKnown RBP8.79□□□□□ -1
VMA21-203ENST00000477649 CGNQ9P2M7 1197 aaKnown RBP8.79□□□□□ -1
VMA21-203ENST00000477649 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.79□□□□□ -1
VMA21-203ENST00000477649 ZNF214Q9UL59 606 aaPredicted RBP8.79□□□□□ -1
VMA21-203ENST00000477649 MAPK8IP1Q9UQF2 711 aa8.79□□□□□ -1
VMA21-203ENST00000477649 TRAF3IP3Q9Y228 551 aa8.79□□□□□ -1
VMA21-203ENST00000477649 PCDHA2Q9Y5H9 948 aa8.79□□□□□ -1
VMA21-203ENST00000477649 SNCAIPQ9Y6H5 919 aa8.79□□□□□ -1
VMA21-203ENST00000477649 NFASCO94856 1347 aa8.79□□□□□ -1
VMA21-203ENST00000477649 SSC5DA1L4H1 1573 aa8.78□□□□□ -1
VMA21-203ENST00000477649 ARHGEF35A5YM69 484 aa8.78□□□□□ -1
VMA21-203ENST00000477649 TRIM49BA6NDI0 452 aa8.78□□□□□ -1
VMA21-203ENST00000477649 SPDYE5A6NIY4 337 aa8.78□□□□□ -1
VMA21-203ENST00000477649 WDR64B1ANS9 1081 aa8.78□□□□□ -1
VMA21-203ENST00000477649 EML1O00423 815 aa8.78□□□□□ -1
VMA21-203ENST00000477649 IRF6O14896 467 aa8.78□□□□□ -1
VMA21-203ENST00000477649 CETN3O15182 167 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms