RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 RASSF9O75901 435 aa14.82□□□□□ -0.04
HLA-DMA-208ENST00000477541 GHRP10912 638 aa14.82□□□□□ -0.04
HLA-DMA-208ENST00000477541 PLCG2P16885 1265 aa14.82□□□□□ -0.04
HLA-DMA-208ENST00000477541 RDXP35241 583 aaKnown RBP14.82□□□□□ -0.04
HLA-DMA-208ENST00000477541 HSD17B3P37058 310 aa14.82□□□□□ -0.04
HLA-DMA-208ENST00000477541 POLR2FP61218 127 aaKnown RBP14.82□□□□□ -0.04
HLA-DMA-208ENST00000477541 SKIDA1Q1XH10 827 aa14.82□□□□□ -0.04
HLA-DMA-208ENST00000477541 LACTB2Q53H82 288 aaPredicted RBP14.82□□□□□ -0.04
HLA-DMA-208ENST00000477541 ASPRV1Q53RT3 343 aa14.82□□□□□ -0.04
HLA-DMA-208ENST00000477541 USP17L1Q7RTZ2 530 aa14.82□□□□□ -0.04
HLA-DMA-208ENST00000477541 VPS36Q86VN1 386 aa14.82□□□□□ -0.04
HLA-DMA-208ENST00000477541 FMNL3Q8IVF7 1028 aa14.82□□□□□ -0.04
HLA-DMA-208ENST00000477541 RASGEF1CQ8N431 466 aa14.82□□□□□ -0.04
HLA-DMA-208ENST00000477541 ANKRD13CQ8N6S4 541 aa14.82□□□□□ -0.04
HLA-DMA-208ENST00000477541 CENPTQ96BT3 561 aa14.82□□□□□ -0.04
HLA-DMA-208ENST00000477541 CYFIP2Q96F07 1278 aa14.82□□□□□ -0.04
HLA-DMA-208ENST00000477541 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.82□□□□□ -0.04
HLA-DMA-208ENST00000477541 MXD3Q9BW11 206 aa14.82□□□□□ -0.04
HLA-DMA-208ENST00000477541 GLT8D2Q9H1C3 349 aa14.82□□□□□ -0.04
HLA-DMA-208ENST00000477541 TTC7AQ9ULT0 858 aaPredicted RBP14.82□□□□□ -0.04
HLA-DMA-208ENST00000477541 DAAM1Q9Y4D1 1078 aa14.82□□□□□ -0.04
HLA-DMA-208ENST00000477541 NFS1Q9Y697 457 aa14.82□□□□□ -0.04
HLA-DMA-208ENST00000477541 STK24Q9Y6E0 443 aa14.82□□□□□ -0.04
HLA-DMA-208ENST00000477541 FLOT1O75955 427 aa14.81□□□□□ -0.04
HLA-DMA-208ENST00000477541 FTCDO95954 541 aa14.81□□□□□ -0.04
HLA-DMA-208ENST00000477541 EPS15P42566 896 aa14.81□□□□□ -0.04
HLA-DMA-208ENST00000477541 GUCY2FP51841 1108 aa14.81□□□□□ -0.04
HLA-DMA-208ENST00000477541 RAPGEF1Q13905 1077 aa14.81□□□□□ -0.04
HLA-DMA-208ENST00000477541 FRMD5Q7Z6J6 570 aa14.81□□□□□ -0.04
HLA-DMA-208ENST00000477541 CELF1Q92879 486 aaKnown RBP14.81□□□□□ -0.04
HLA-DMA-208ENST00000477541 NLRC4Q9NPP4 1024 aa14.81□□□□□ -0.04
HLA-DMA-208ENST00000477541 KLC4Q9NSK0 619 aa14.81□□□□□ -0.04
HLA-DMA-208ENST00000477541 PANK4Q9NVE7 773 aa14.81□□□□□ -0.04
HLA-DMA-208ENST00000477541 SUCLA2Q9P2R7 463 aaPredicted RBP14.81□□□□□ -0.04
HLA-DMA-208ENST00000477541 A0A087X0T9 212 aa14.8□□□□□ -0.04
HLA-DMA-208ENST00000477541 E7EVH7 732 aa14.8□□□□□ -0.04
HLA-DMA-208ENST00000477541 CETN3O15182 167 aa14.8□□□□□ -0.04
HLA-DMA-208ENST00000477541 NKRFO15226 690 aaKnown RBP eCLIP14.8□□□□□ -0.04
HLA-DMA-208ENST00000477541 C21orf2O43822 256 aa14.8□□□□□ -0.04
HLA-DMA-208ENST00000477541 CCDC172P0C7W6 258 aa14.8□□□□□ -0.04
HLA-DMA-208ENST00000477541 FAM228BP0C875 321 aa14.8□□□□□ -0.04
HLA-DMA-208ENST00000477541 ECHS1P30084 290 aa14.8□□□□□ -0.04
HLA-DMA-208ENST00000477541 PPP2R2AP63151 447 aa14.8□□□□□ -0.04
HLA-DMA-208ENST00000477541 HLTFQ14527 1009 aaKnown RBP eCLIP14.8□□□□□ -0.04
HLA-DMA-208ENST00000477541 TTC19Q6DKK2 380 aaPredicted RBP14.8□□□□□ -0.04
HLA-DMA-208ENST00000477541 C15orf52Q6ZUT6 534 aaKnown RBP14.8□□□□□ -0.04
HLA-DMA-208ENST00000477541 DYMQ7RTS9 669 aa14.8□□□□□ -0.04
HLA-DMA-208ENST00000477541 SLFN11Q7Z7L1 901 aa14.8□□□□□ -0.04
HLA-DMA-208ENST00000477541 LRRC57Q8N9N7 239 aa14.8□□□□□ -0.04
HLA-DMA-208ENST00000477541 HPS3Q969F9 1004 aa14.8□□□□□ -0.04
HLA-DMA-208ENST00000477541 DYNLL2Q96FJ2 89 aa14.8□□□□□ -0.04
HLA-DMA-208ENST00000477541 FOCADQ5VW36 1801 aa14.8□□□□□ -0.04
HLA-DMA-208ENST00000477541 FRMD3A2A2Y4 597 aa14.8□□□□□ -0.04
HLA-DMA-208ENST00000477541 KIF1CO43896 1103 aaKnown RBP14.8□□□□□ -0.04
HLA-DMA-208ENST00000477541 CTNNA1P35221 906 aaKnown RBP14.8□□□□□ -0.04
HLA-DMA-208ENST00000477541 ERVK-9P63128 1117 aa14.8□□□□□ -0.04
HLA-DMA-208ENST00000477541 HDLBPQ00341 1268 aaKnown RBP14.8□□□□□ -0.04
HLA-DMA-208ENST00000477541 ITPK1Q13572 414 aa14.8□□□□□ -0.04
HLA-DMA-208ENST00000477541 CCDC13Q8IYE1 715 aa14.8□□□□□ -0.04
HLA-DMA-208ENST00000477541 SH3RF3Q8TEJ3 882 aaPredicted RBP14.8□□□□□ -0.04
HLA-DMA-208ENST00000477541 NLRP3Q96P20 1036 aa14.8□□□□□ -0.04
HLA-DMA-208ENST00000477541 EYA3Q99504 573 aa14.8□□□□□ -0.04
HLA-DMA-208ENST00000477541 STK32BQ9NY57 414 aa14.8□□□□□ -0.04
HLA-DMA-208ENST00000477541 NENFQ9UMX5 172 aa14.8□□□□□ -0.04
HLA-DMA-208ENST00000477541 LEMD3Q9Y2U8 911 aa14.8□□□□□ -0.04
HLA-DMA-208ENST00000477541 ESYT3A0FGR9 886 aa14.79□□□□□ -0.04
HLA-DMA-208ENST00000477541 KCNK3O14649 394 aa14.79□□□□□ -0.04
HLA-DMA-208ENST00000477541 GBP1P32455 592 aa14.79□□□□□ -0.04
HLA-DMA-208ENST00000477541 ZNF844Q08AG5 666 aa14.79□□□□□ -0.04
HLA-DMA-208ENST00000477541 NEDD9Q14511 834 aa14.79□□□□□ -0.04
HLA-DMA-208ENST00000477541 NBPF9Q3BBW0 867 aa14.79□□□□□ -0.04
HLA-DMA-208ENST00000477541 PREPLQ4J6C6 727 aaPredicted RBP14.79□□□□□ -0.04
HLA-DMA-208ENST00000477541 RNF187Q5TA31 235 aaPredicted RBP14.79□□□□□ -0.04
HLA-DMA-208ENST00000477541 KCTD17Q8N5Z5 321 aa14.79□□□□□ -0.04
HLA-DMA-208ENST00000477541 NAP1L3Q99457 506 aaPredicted RBP14.79□□□□□ -0.04
HLA-DMA-208ENST00000477541 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.79□□□□□ -0.04
HLA-DMA-208ENST00000477541 BIN2Q9UBW5 565 aaPredicted RBP14.79□□□□□ -0.04
HLA-DMA-208ENST00000477541 PCDHA2Q9Y5H9 948 aa14.79□□□□□ -0.04
HLA-DMA-208ENST00000477541 GTPBP10A4D1E9 387 aaKnown RBP14.78□□□□□ -0.04
HLA-DMA-208ENST00000477541 ZSCAN5CA6NGD5 496 aaPredicted RBP14.78□□□□□ -0.04
HLA-DMA-208ENST00000477541 MYO1FO00160 1098 aa14.78□□□□□ -0.04
HLA-DMA-208ENST00000477541 CDK8P49336 464 aa14.78□□□□□ -0.04
HLA-DMA-208ENST00000477541 MRPS25P82663 173 aaKnown RBP14.78□□□□□ -0.04
HLA-DMA-208ENST00000477541 SLC15A2Q16348 729 aa14.78□□□□□ -0.04
HLA-DMA-208ENST00000477541 WLSQ5T9L3 541 aa14.78□□□□□ -0.04
HLA-DMA-208ENST00000477541 C3orf67Q6ZVT6 689 aa14.78□□□□□ -0.04
HLA-DMA-208ENST00000477541 HOOK3Q86VS8 718 aa14.78□□□□□ -0.04
HLA-DMA-208ENST00000477541 CACNA2D3Q8IZS8 1091 aa14.78□□□□□ -0.04
HLA-DMA-208ENST00000477541 PIGSQ96S52 555 aa14.78□□□□□ -0.04
HLA-DMA-208ENST00000477541 HINFPQ9BQA5 517 aa14.78□□□□□ -0.04
HLA-DMA-208ENST00000477541 RAB17Q9H0T7 212 aa14.78□□□□□ -0.04
HLA-DMA-208ENST00000477541 KCTD10Q9H3F6 313 aa14.78□□□□□ -0.04
HLA-DMA-208ENST00000477541 KDM4CQ9H3R0 1056 aa14.78□□□□□ -0.04
HLA-DMA-208ENST00000477541 CXorf56Q9H5V9 222 aa14.78□□□□□ -0.04
HLA-DMA-208ENST00000477541 METTL14Q9HCE5 456 aaKnown RBP14.78□□□□□ -0.04
HLA-DMA-208ENST00000477541 ADAMTS1Q9UHI8 967 aa14.78□□□□□ -0.04
HLA-DMA-208ENST00000477541 TRAF3IP3Q9Y228 551 aa14.78□□□□□ -0.04
HLA-DMA-208ENST00000477541 SLC16A3O15427 465 aaKnown RBP14.78□□□□□ -0.04
HLA-DMA-208ENST00000477541 SART1O43290 800 aaKnown RBP14.78□□□□□ -0.04
HLA-DMA-208ENST00000477541 ZBTB48P10074 688 aaPredicted RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms