RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 DIAPH1O60610 1272 aaKnown RBP6.34□□□□□ -1.39
UBR3-209ENST00000477461 ZNF623O75123 536 aa6.34□□□□□ -1.39
UBR3-209ENST00000477461 CNOT4O95628 575 aaKnown RBP6.34□□□□□ -1.39
UBR3-209ENST00000477461 AMHP03971 560 aa6.34□□□□□ -1.39
UBR3-209ENST00000477461 ZNF888P0CJ79 500 aaPredicted RBP6.34□□□□□ -1.39
UBR3-209ENST00000477461 PYGMP11217 842 aa6.34□□□□□ -1.39
UBR3-209ENST00000477461 EPHA5P54756 1037 aa6.34□□□□□ -1.39
UBR3-209ENST00000477461 PAK1Q13153 545 aa6.34□□□□□ -1.39
UBR3-209ENST00000477461 NOLC1Q14978 699 aaKnown RBP eCLIP6.34□□□□□ -1.39
UBR3-209ENST00000477461 NAALADL2Q58DX5 795 aa6.34□□□□□ -1.39
UBR3-209ENST00000477461 DNERQ8NFT8 737 aa6.34□□□□□ -1.39
UBR3-209ENST00000477461 IPO9Q96P70 1041 aaKnown RBP6.34□□□□□ -1.39
UBR3-209ENST00000477461 PCDHA9Q9Y5H5 950 aa6.34□□□□□ -1.39
UBR3-209ENST00000477461 TRBV23-1A0A0A0MS06 115 aa6.33□□□□□ -1.4
UBR3-209ENST00000477461 FAM153BP0C7A2 387 aa6.33□□□□□ -1.4
UBR3-209ENST00000477461 PDE6AP16499 860 aa6.33□□□□□ -1.4
UBR3-209ENST00000477461 CSF2RBP32927 897 aa6.33□□□□□ -1.4
UBR3-209ENST00000477461 GUCY1A3Q02108 690 aa6.33□□□□□ -1.4
UBR3-209ENST00000477461 EP400NLQ6ZTU2 488 aa6.33□□□□□ -1.4
UBR3-209ENST00000477461 DPH6Q7L8W6 267 aa6.33□□□□□ -1.4
UBR3-209ENST00000477461 NPM2Q86SE8 214 aaKnown RBP6.33□□□□□ -1.4
UBR3-209ENST00000477461 PTRH1Q86Y79 214 aaKnown RBP6.33□□□□□ -1.4
UBR3-209ENST00000477461 PCDH19Q8TAB3 1148 aa6.33□□□□□ -1.4
UBR3-209ENST00000477461 AJUBAQ96IF1 538 aa6.33□□□□□ -1.4
UBR3-209ENST00000477461 LMF1Q96S06 567 aa6.33□□□□□ -1.4
UBR3-209ENST00000477461 SCAND2PQ9GZW5 306 aaPredicted RBP6.33□□□□□ -1.4
UBR3-209ENST00000477461 MEGF9Q9H1U4 602 aa6.33□□□□□ -1.4
UBR3-209ENST00000477461 ARHGAP28Q9P2N2 729 aa6.33□□□□□ -1.4
UBR3-209ENST00000477461 TSC22D4Q9Y3Q8 395 aa6.33□□□□□ -1.4
UBR3-209ENST00000477461 C6P13671 934 aa6.32□□□□□ -1.4
UBR3-209ENST00000477461 PTPN1P18031 435 aaKnown RBP6.32□□□□□ -1.4
UBR3-209ENST00000477461 DNM2P50570 870 aa6.32□□□□□ -1.4
UBR3-209ENST00000477461 RRADP55042 308 aa6.32□□□□□ -1.4
UBR3-209ENST00000477461 JAM2P57087 298 aa6.32□□□□□ -1.4
UBR3-209ENST00000477461 DBPQ10586 325 aaPredicted RBP6.32□□□□□ -1.4
UBR3-209ENST00000477461 GIMAP8Q8ND71 665 aaPredicted RBP6.32□□□□□ -1.4
UBR3-209ENST00000477461 Q8TCH9 128 aa6.32□□□□□ -1.4
UBR3-209ENST00000477461 PTPRN2Q92932 1015 aa6.32□□□□□ -1.4
UBR3-209ENST00000477461 FBXW5Q969U6 566 aa6.32□□□□□ -1.4
UBR3-209ENST00000477461 CBLCQ9ULV8 474 aa6.32□□□□□ -1.4
UBR3-209ENST00000477461 MSRB2Q9Y3D2 182 aa6.32□□□□□ -1.4
UBR3-209ENST00000477461 TCAF1Q9Y4C2 921 aa6.32□□□□□ -1.4
UBR3-209ENST00000477461 SCRIBQ14160 1630 aa6.32□□□□□ -1.4
UBR3-209ENST00000477461 PATE3B3GLJ2 98 aa6.31□□□□□ -1.4
UBR3-209ENST00000477461 MAN2B1O00754 1011 aa6.31□□□□□ -1.4
UBR3-209ENST00000477461 AQP7O14520 342 aa6.31□□□□□ -1.4
UBR3-209ENST00000477461 FOXS1O43638 330 aa6.31□□□□□ -1.4
UBR3-209ENST00000477461 AMY2AP04746 511 aa6.31□□□□□ -1.4
UBR3-209ENST00000477461 CHGBP05060 677 aa6.31□□□□□ -1.4
UBR3-209ENST00000477461 AMY2BP19961 511 aa6.31□□□□□ -1.4
UBR3-209ENST00000477461 GTF2F1P35269 517 aaKnown RBP eCLIP6.31□□□□□ -1.4
UBR3-209ENST00000477461 ST5P78524 1137 aa6.31□□□□□ -1.4
UBR3-209ENST00000477461 GPR19Q15760 415 aa6.31□□□□□ -1.4
UBR3-209ENST00000477461 TAX1BP1Q86VP1 789 aa6.31□□□□□ -1.4
UBR3-209ENST00000477461 ZBTB38Q8NAP3 1195 aaPredicted RBP6.31□□□□□ -1.4
UBR3-209ENST00000477461 TANGO6Q9C0B7 1094 aa6.31□□□□□ -1.4
UBR3-209ENST00000477461 PDGFDQ9GZP0 370 aaPredicted RBP6.31□□□□□ -1.4
UBR3-209ENST00000477461 SRPK3Q9UPE1 567 aa6.31□□□□□ -1.4
UBR3-209ENST00000477461 CRTAMO95727 393 aa6.3□□□□□ -1.4
UBR3-209ENST00000477461 C6orf222P0C671 652 aaPredicted RBP6.3□□□□□ -1.4
UBR3-209ENST00000477461 ATP2B1P20020 1258 aa6.3□□□□□ -1.4
UBR3-209ENST00000477461 ADCY8P40145 1251 aa6.3□□□□□ -1.4
UBR3-209ENST00000477461 SUMO1P63165 101 aaKnown RBP6.3□□□□□ -1.4
UBR3-209ENST00000477461 RASGRF1Q13972 1273 aa6.3□□□□□ -1.4
UBR3-209ENST00000477461 USP10Q14694 798 aaKnown RBP6.3□□□□□ -1.4
UBR3-209ENST00000477461 WDR72Q3MJ13 1102 aa6.3□□□□□ -1.4
UBR3-209ENST00000477461 SPDYAQ5MJ70 313 aa6.3□□□□□ -1.4
UBR3-209ENST00000477461 TCTN3Q6NUS6 607 aa6.3□□□□□ -1.4
UBR3-209ENST00000477461 IFNL2Q8IZJ0 200 aa6.3□□□□□ -1.4
UBR3-209ENST00000477461 NLGN4XQ8N0W4 816 aa6.3□□□□□ -1.4
UBR3-209ENST00000477461 Q8N1X5 172 aa6.3□□□□□ -1.4
UBR3-209ENST00000477461 EXOC2Q96KP1 924 aa6.3□□□□□ -1.4
UBR3-209ENST00000477461 CDK5RAP1Q96SZ6 601 aaKnown RBP6.3□□□□□ -1.4
UBR3-209ENST00000477461 CARD11Q9BXL7 1154 aa6.3□□□□□ -1.4
UBR3-209ENST00000477461 KATNBL1Q9H079 304 aa6.3□□□□□ -1.4
UBR3-209ENST00000477461 CCDC113Q9H0I3 377 aa6.3□□□□□ -1.4
UBR3-209ENST00000477461 ATP23Q9Y6H3 246 aa6.3□□□□□ -1.4
UBR3-209ENST00000477461 SLC4A7Q9Y6M7 1214 aa6.3□□□□□ -1.4
UBR3-209ENST00000477461 KDM2BQ8NHM5 1336 aa6.29□□□□□ -1.4
UBR3-209ENST00000477461 MUSKO15146 869 aa6.29□□□□□ -1.4
UBR3-209ENST00000477461 ZC3H6P61129 1189 aaKnown RBP6.29□□□□□ -1.4
UBR3-209ENST00000477461 CRY1Q16526 586 aa6.29□□□□□ -1.4
UBR3-209ENST00000477461 MAMDC2Q7Z304 686 aaPredicted RBP6.29□□□□□ -1.4
UBR3-209ENST00000477461 ZFPM1Q8IX07 1006 aa6.29□□□□□ -1.4
UBR3-209ENST00000477461 ZNF669Q96BR6 464 aaPredicted RBP6.29□□□□□ -1.4
UBR3-209ENST00000477461 C8orf37Q96NL8 207 aa6.29□□□□□ -1.4
UBR3-209ENST00000477461 VPS11Q9H270 941 aa6.29□□□□□ -1.4
UBR3-209ENST00000477461 CDC42EP3Q9UKI2 254 aa6.29□□□□□ -1.4
UBR3-209ENST00000477461 ZFR2Q9UPR6 939 aaKnown RBP6.29□□□□□ -1.4
UBR3-209ENST00000477461 UNC13AQ9UPW8 1703 aa6.29□□□□□ -1.4
UBR3-209ENST00000477461 SHROOM4Q9ULL8 1493 aa6.28□□□□□ -1.4
UBR3-209ENST00000477461 CCDC66A2RUB6 948 aa6.28□□□□□ -1.4
UBR3-209ENST00000477461 PRAMEF25A6NGN4 478 aa6.28□□□□□ -1.4
UBR3-209ENST00000477461 TACR2P21452 398 aa6.28□□□□□ -1.4
UBR3-209ENST00000477461 POLD1P28340 1107 aa6.28□□□□□ -1.4
UBR3-209ENST00000477461 MC4RP32245 332 aa6.28□□□□□ -1.4
UBR3-209ENST00000477461 SELENOPP49908 381 aa6.28□□□□□ -1.4
UBR3-209ENST00000477461 RNF151Q2KHN1 245 aa6.28□□□□□ -1.4
UBR3-209ENST00000477461 C16orf59Q7L2K0 433 aa6.28□□□□□ -1.4
UBR3-209ENST00000477461 ZC3H7AQ8IWR0 971 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms