RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 SMCR8Q8TEV9 937 aaPredicted RBP12.7□□□□□ -0.38
NUP188-205ENST00000477069 LPAR1Q92633 364 aa12.7□□□□□ -0.38
NUP188-205ENST00000477069 RABGGTAQ92696 567 aa12.7□□□□□ -0.38
NUP188-205ENST00000477069 GOLGA1Q92805 767 aa12.7□□□□□ -0.38
NUP188-205ENST00000477069 JAKMIP2Q96AA8 810 aa12.7□□□□□ -0.38
NUP188-205ENST00000477069 MMRN2Q9H8L6 949 aa12.7□□□□□ -0.38
NUP188-205ENST00000477069 WRAP73Q9P2S5 460 aaPredicted RBP12.7□□□□□ -0.38
NUP188-205ENST00000477069 FAM184BQ9ULE4 1060 aa12.7□□□□□ -0.38
NUP188-205ENST00000477069 MYH11P35749 1972 aa12.7□□□□□ -0.38
NUP188-205ENST00000477069 ASTN1O14525 1302 aa12.7□□□□□ -0.38
NUP188-205ENST00000477069 LOC285556D6RIA3 1793 aa12.69□□□□□ -0.38
NUP188-205ENST00000477069 PDXKO00764 312 aa12.69□□□□□ -0.38
NUP188-205ENST00000477069 ZRANB2O95218 330 aaKnown RBP eCLIP12.69□□□□□ -0.38
NUP188-205ENST00000477069 VAV2P52735 878 aa12.69□□□□□ -0.38
NUP188-205ENST00000477069 ADAM9Q13443 819 aa12.69□□□□□ -0.38
NUP188-205ENST00000477069 HGSNATQ68CP4 663 aa12.69□□□□□ -0.38
NUP188-205ENST00000477069 DPY19L2P1Q6NXN4 242 aa12.69□□□□□ -0.38
NUP188-205ENST00000477069 TRAPPC11Q7Z392 1133 aa12.69□□□□□ -0.38
NUP188-205ENST00000477069 EPC1Q9H2F5 836 aa12.69□□□□□ -0.38
NUP188-205ENST00000477069 UNC45AQ9H3U1 944 aa12.69□□□□□ -0.38
NUP188-205ENST00000477069 GINM1Q9NU53 330 aa12.69□□□□□ -0.38
NUP188-205ENST00000477069 CEP72Q9P209 647 aa12.69□□□□□ -0.38
NUP188-205ENST00000477069 GUCA1BQ9UMX6 200 aa12.69□□□□□ -0.38
NUP188-205ENST00000477069 ZMYM2Q9UBW7 1377 aa12.69□□□□□ -0.38
NUP188-205ENST00000477069 SPDYE4A6NLX3 237 aa12.69□□□□□ -0.38
NUP188-205ENST00000477069 ZBTB7AO95365 584 aa12.69□□□□□ -0.38
NUP188-205ENST00000477069 MAPK8IP2Q13387 824 aaPredicted RBP12.69□□□□□ -0.38
NUP188-205ENST00000477069 CCDC122Q5T0U0 273 aa12.69□□□□□ -0.38
NUP188-205ENST00000477069 CEP112Q8N8E3 955 aa12.69□□□□□ -0.38
NUP188-205ENST00000477069 JDP2Q8WYK2 163 aa12.69□□□□□ -0.38
NUP188-205ENST00000477069 MXRA8Q9BRK3 442 aa12.69□□□□□ -0.38
NUP188-205ENST00000477069 CCPG1Q9ULG6 757 aa12.69□□□□□ -0.38
NUP188-205ENST00000477069 GAS7O60861 476 aa12.68□□□□□ -0.38
NUP188-205ENST00000477069 TFRCP02786 760 aaKnown RBP12.68□□□□□ -0.38
NUP188-205ENST00000477069 BCRP11274 1271 aa12.68□□□□□ -0.38
NUP188-205ENST00000477069 ITGB5P18084 799 aa12.68□□□□□ -0.38
NUP188-205ENST00000477069 NR2F2P24468 414 aa12.68□□□□□ -0.38
NUP188-205ENST00000477069 CHMP4BP1P59074 171 aa12.68□□□□□ -0.38
NUP188-205ENST00000477069 WHAMMP3Q1A5X7 153 aa12.68□□□□□ -0.38
NUP188-205ENST00000477069 FRMD5Q7Z6J6 570 aa12.68□□□□□ -0.38
NUP188-205ENST00000477069 PRPF38AQ8NAV1 312 aaKnown RBP12.68□□□□□ -0.38
NUP188-205ENST00000477069 NEK11Q8NG66 645 aa12.68□□□□□ -0.38
NUP188-205ENST00000477069 SYN2Q92777 582 aaPredicted RBP12.68□□□□□ -0.38
NUP188-205ENST00000477069 FIZ1Q96SL8 496 aa12.68□□□□□ -0.38
NUP188-205ENST00000477069 ZNF577Q9BSK1 485 aa12.68□□□□□ -0.38
NUP188-205ENST00000477069 WDR11Q9BZH6 1224 aa12.68□□□□□ -0.38
NUP188-205ENST00000477069 ZHX3Q9H4I2 956 aa12.68□□□□□ -0.38
NUP188-205ENST00000477069 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.68□□□□□ -0.38
NUP188-205ENST00000477069 LTBP3Q9NS15 1303 aa12.68□□□□□ -0.38
NUP188-205ENST00000477069 NFIBO00712 420 aa12.68□□□□□ -0.38
NUP188-205ENST00000477069 PRPF6O94906 941 aaKnown RBP12.68□□□□□ -0.38
NUP188-205ENST00000477069 GAP43P17677 238 aa12.68□□□□□ -0.38
NUP188-205ENST00000477069 KIF11P52732 1056 aa12.68□□□□□ -0.38
NUP188-205ENST00000477069 ZNF131P52739 623 aa12.68□□□□□ -0.38
NUP188-205ENST00000477069 CYP27A1Q02318 531 aa12.68□□□□□ -0.38
NUP188-205ENST00000477069 DGKZQ13574 1117 aa12.68□□□□□ -0.38
NUP188-205ENST00000477069 TNFAIP1Q13829 316 aa12.68□□□□□ -0.38
NUP188-205ENST00000477069 PAPD7Q5XG87 772 aaKnown RBP12.68□□□□□ -0.38
NUP188-205ENST00000477069 RRAGAQ7L523 313 aa12.68□□□□□ -0.38
NUP188-205ENST00000477069 KIAA1328Q86T90 577 aa12.68□□□□□ -0.38
NUP188-205ENST00000477069 PIGOQ8TEQ8 1089 aa12.68□□□□□ -0.38
NUP188-205ENST00000477069 CCDC42Q96M95 316 aa12.68□□□□□ -0.38
NUP188-205ENST00000477069 TANGO6Q9C0B7 1094 aa12.68□□□□□ -0.38
NUP188-205ENST00000477069 SLC38A10Q9HBR0 1119 aa12.68□□□□□ -0.38
NUP188-205ENST00000477069 TYW1Q9NV66 732 aaKnown RBP12.68□□□□□ -0.38
NUP188-205ENST00000477069 ASTN2O75129 1339 aaPredicted RBP12.68□□□□□ -0.38
NUP188-205ENST00000477069 ZBTB39O15060 712 aa12.68□□□□□ -0.38
NUP188-205ENST00000477069 CETN3O15182 167 aa12.68□□□□□ -0.38
NUP188-205ENST00000477069 EIF3DO15371 548 aaKnown RBP eCLIP12.68□□□□□ -0.38
NUP188-205ENST00000477069 CHMP2AO43633 222 aa12.68□□□□□ -0.38
NUP188-205ENST00000477069 KRT86O43790 486 aa12.68□□□□□ -0.38
NUP188-205ENST00000477069 TLR2O60603 784 aa12.68□□□□□ -0.38
NUP188-205ENST00000477069 CTNND1O60716 968 aaKnown RBP12.68□□□□□ -0.38
NUP188-205ENST00000477069 EIF4A3P38919 411 aaKnown RBP12.68□□□□□ -0.38
NUP188-205ENST00000477069 EPHA7Q15375 998 aa12.68□□□□□ -0.38
NUP188-205ENST00000477069 TEX35Q5T0J7 233 aa12.68□□□□□ -0.38
NUP188-205ENST00000477069 NIPA1Q7RTP0 329 aa12.68□□□□□ -0.38
NUP188-205ENST00000477069 KRT26Q7Z3Y9 468 aa12.68□□□□□ -0.38
NUP188-205ENST00000477069 EHBP1Q8NDI1 1231 aa12.68□□□□□ -0.38
NUP188-205ENST00000477069 HOOK2Q96ED9 719 aa12.68□□□□□ -0.38
NUP188-205ENST00000477069 RIT2Q99578 217 aa12.68□□□□□ -0.38
NUP188-205ENST00000477069 GANQ9H2C0 597 aa12.68□□□□□ -0.38
NUP188-205ENST00000477069 RBAK-RBAKDNI3L0D1 243 aa12.67□□□□□ -0.38
NUP188-205ENST00000477069 CBX1P83916 185 aa12.67□□□□□ -0.38
NUP188-205ENST00000477069 NFIL3Q16649 462 aa12.67□□□□□ -0.38
NUP188-205ENST00000477069 TPH2Q8IWU9 490 aa12.67□□□□□ -0.38
NUP188-205ENST00000477069 IL31RAQ8NI17 732 aa12.67□□□□□ -0.38
NUP188-205ENST00000477069 ZFP91Q96JP5 570 aaPredicted RBP12.67□□□□□ -0.38
NUP188-205ENST00000477069 TEKT3Q9BXF9 490 aa12.67□□□□□ -0.38
NUP188-205ENST00000477069 MYO6Q9UM54 1294 aa12.67□□□□□ -0.38
NUP188-205ENST00000477069 FHOD1Q9Y613 1164 aa12.67□□□□□ -0.38
NUP188-205ENST00000477069 DUSP10Q9Y6W6 482 aa12.67□□□□□ -0.38
NUP188-205ENST00000477069 WDR90Q96KV7 1748 aa12.67□□□□□ -0.38
NUP188-205ENST00000477069 SSU72P8A0A1W2PR75 194 aa12.67□□□□□ -0.38
NUP188-205ENST00000477069 IPO5O00410 1097 aaKnown RBP12.67□□□□□ -0.38
NUP188-205ENST00000477069 TGFB1I1O43294 461 aa12.67□□□□□ -0.38
NUP188-205ENST00000477069 CALUO43852 315 aaPredicted RBP12.67□□□□□ -0.38
NUP188-205ENST00000477069 TBCAO75347 108 aaKnown RBP12.67□□□□□ -0.38
NUP188-205ENST00000477069 ATP1A1P05023 1023 aaKnown RBP12.67□□□□□ -0.38
NUP188-205ENST00000477069 LSM14BQ9BX40 385 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms