RNA–Protein interactions for RNA: ENST00000476961.5

CNTNAP3B-205, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 2,643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-205ENST00000476961 PEX5P50542 639 aa9.04□□□□□ -0.96
CNTNAP3B-205ENST00000476961 BIRC3Q13489 604 aa9.04□□□□□ -0.96
CNTNAP3B-205ENST00000476961 STIM1Q13586 685 aa9.04□□□□□ -0.96
CNTNAP3B-205ENST00000476961 SEPT7Q16181 437 aaKnown RBP9.04□□□□□ -0.96
CNTNAP3B-205ENST00000476961 SPECC1Q5M775 1068 aa9.04□□□□□ -0.96
CNTNAP3B-205ENST00000476961 ALS2CLQ60I27 953 aa9.04□□□□□ -0.96
CNTNAP3B-205ENST00000476961 FIP1L1Q6UN15 594 aaKnown RBP9.04□□□□□ -0.96
CNTNAP3B-205ENST00000476961 C3orf62Q6ZUJ4 267 aa9.04□□□□□ -0.96
CNTNAP3B-205ENST00000476961 VGLL2Q8N8G2 317 aa9.04□□□□□ -0.96
CNTNAP3B-205ENST00000476961 ASIC4Q96FT7 647 aa9.04□□□□□ -0.96
CNTNAP3B-205ENST00000476961 C8orf48Q96LL4 319 aa9.04□□□□□ -0.96
CNTNAP3B-205ENST00000476961 C1orf74Q96LT6 269 aa9.04□□□□□ -0.96
CNTNAP3B-205ENST00000476961 CARD9Q9H257 536 aa9.04□□□□□ -0.96
CNTNAP3B-205ENST00000476961 ALDH8A1Q9H2A2 487 aaPredicted RBP9.04□□□□□ -0.96
CNTNAP3B-205ENST00000476961 CNNM1Q9NRU3 951 aa9.04□□□□□ -0.96
CNTNAP3B-205ENST00000476961 HSFX1Q9UBD0 423 aa9.04□□□□□ -0.96
CNTNAP3B-205ENST00000476961 SQORQ9Y6N5 450 aa9.04□□□□□ -0.96
CNTNAP3B-205ENST00000476961 hCG_2014768A0A024R1R8 64 aa9.04□□□□□ -0.96
CNTNAP3B-205ENST00000476961 MYCP01106 439 aaPredicted RBP9.04□□□□□ -0.96
CNTNAP3B-205ENST00000476961 TAF11Q15544 211 aa9.04□□□□□ -0.96
CNTNAP3B-205ENST00000476961 HIBCHQ6NVY1 386 aaPredicted RBP9.04□□□□□ -0.96
CNTNAP3B-205ENST00000476961 LLGL2Q6P1M3 1020 aa9.04□□□□□ -0.96
CNTNAP3B-205ENST00000476961 COG1Q8WTW3 980 aa9.04□□□□□ -0.96
CNTNAP3B-205ENST00000476961 ANKRD49Q8WVL7 239 aa9.04□□□□□ -0.96
CNTNAP3B-205ENST00000476961 FTOQ9C0B1 505 aaKnown RBP eCLIP9.04□□□□□ -0.96
CNTNAP3B-205ENST00000476961 NDST4Q9H3R1 872 aa9.04□□□□□ -0.96
CNTNAP3B-205ENST00000476961 ZSWIM4Q9H7M6 989 aa9.04□□□□□ -0.96
CNTNAP3B-205ENST00000476961 TYW1Q9NV66 732 aaKnown RBP9.04□□□□□ -0.96
CNTNAP3B-205ENST00000476961 FKBP14Q9NWM8 211 aa9.04□□□□□ -0.96
CNTNAP3B-205ENST00000476961 SEPT10Q9P0V9 454 aa9.04□□□□□ -0.96
CNTNAP3B-205ENST00000476961 STK39Q9UEW8 545 aa9.04□□□□□ -0.96
CNTNAP3B-205ENST00000476961 PCSK1NQ9UHG2 260 aa9.04□□□□□ -0.96
CNTNAP3B-205ENST00000476961 MTUS1Q9ULD2 1270 aa9.04□□□□□ -0.96
CNTNAP3B-205ENST00000476961 LUC7L2Q9Y383 392 aaKnown RBP9.04□□□□□ -0.96
CNTNAP3B-205ENST00000476961 PNPLA7Q6ZV29 1317 aa9.03□□□□□ -0.96
CNTNAP3B-205ENST00000476961 B4GALT4O60513 344 aa9.03□□□□□ -0.96
CNTNAP3B-205ENST00000476961 CCND1P24385 295 aa9.03□□□□□ -0.96
CNTNAP3B-205ENST00000476961 KRT9P35527 623 aa9.03□□□□□ -0.96
CNTNAP3B-205ENST00000476961 RASSF7Q02833 373 aa9.03□□□□□ -0.96
CNTNAP3B-205ENST00000476961 MAP3K12Q12852 859 aa9.03□□□□□ -0.96
CNTNAP3B-205ENST00000476961 PDCLQ13371 301 aa9.03□□□□□ -0.96
CNTNAP3B-205ENST00000476961 CMPK2Q5EBM0 449 aa9.03□□□□□ -0.96
CNTNAP3B-205ENST00000476961 METTL24Q5JXM2 366 aa9.03□□□□□ -0.96
CNTNAP3B-205ENST00000476961 MCF2L2Q86YR7 1114 aa9.03□□□□□ -0.96
CNTNAP3B-205ENST00000476961 VPS52Q8N1B4 723 aa9.03□□□□□ -0.96
CNTNAP3B-205ENST00000476961 GOLM1Q8NBJ4 401 aa9.03□□□□□ -0.96
CNTNAP3B-205ENST00000476961 SLC16A10Q8TF71 515 aa9.03□□□□□ -0.96
CNTNAP3B-205ENST00000476961 SIKE1Q9BRV8 207 aa9.03□□□□□ -0.96
CNTNAP3B-205ENST00000476961 GBA3Q9H227 469 aa9.03□□□□□ -0.96
CNTNAP3B-205ENST00000476961 BOLA2Q9H3K6 86 aa9.03□□□□□ -0.96
CNTNAP3B-205ENST00000476961 CCPG1Q9ULG6 757 aa9.03□□□□□ -0.96
CNTNAP3B-205ENST00000476961 FAM32AQ9Y421 112 aaKnown RBP9.03□□□□□ -0.96
CNTNAP3B-205ENST00000476961 KCNJ13O60928 360 aa9.03□□□□□ -0.96
CNTNAP3B-205ENST00000476961 GNA14O95837 355 aa9.03□□□□□ -0.96
CNTNAP3B-205ENST00000476961 TOP1P11387 765 aaKnown RBP9.03□□□□□ -0.96
CNTNAP3B-205ENST00000476961 GNG11P61952 73 aa9.03□□□□□ -0.96
CNTNAP3B-205ENST00000476961 AMPD3Q01432 767 aa9.03□□□□□ -0.96
CNTNAP3B-205ENST00000476961 CAMK4Q16566 473 aa9.03□□□□□ -0.96
CNTNAP3B-205ENST00000476961 PCNX4Q63HM2 1172 aa9.03□□□□□ -0.96
CNTNAP3B-205ENST00000476961 PRR5LQ6MZQ0 368 aa9.03□□□□□ -0.96
CNTNAP3B-205ENST00000476961 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.03□□□□□ -0.96
CNTNAP3B-205ENST00000476961 ILDR1Q86SU0 546 aaPredicted RBP9.03□□□□□ -0.96
CNTNAP3B-205ENST00000476961 SCAIQ8N9R8 606 aa9.03□□□□□ -0.96
CNTNAP3B-205ENST00000476961 CCDC110Q8TBZ0 833 aa9.03□□□□□ -0.96
CNTNAP3B-205ENST00000476961 USP6NLQ92738 828 aa9.03□□□□□ -0.96
CNTNAP3B-205ENST00000476961 P3H4Q92791 437 aa9.03□□□□□ -0.96
CNTNAP3B-205ENST00000476961 UROC1Q96N76 676 aa9.03□□□□□ -0.96
CNTNAP3B-205ENST00000476961 NLRP3Q96P20 1036 aa9.03□□□□□ -0.96
CNTNAP3B-205ENST00000476961 B3GNT4Q9C0J1 378 aa9.03□□□□□ -0.96
CNTNAP3B-205ENST00000476961 PDGFDQ9GZP0 370 aaPredicted RBP9.03□□□□□ -0.96
CNTNAP3B-205ENST00000476961 ARHGEF38Q9NXL2 777 aa9.03□□□□□ -0.96
CNTNAP3B-205ENST00000476961 NOSIPQ9Y314 301 aaKnown RBP9.03□□□□□ -0.96
CNTNAP3B-205ENST00000476961 FADS3Q9Y5Q0 445 aa9.03□□□□□ -0.96
CNTNAP3B-205ENST00000476961 LOC105371267A0A1B0GV96 52 aa9.02□□□□□ -0.96
CNTNAP3B-205ENST00000476961 CCDC162PA2VCL2 907 aa9.02□□□□□ -0.96
CNTNAP3B-205ENST00000476961 SRRM3A6NNA2 597 aaPredicted RBP9.02□□□□□ -0.96
CNTNAP3B-205ENST00000476961 CYTH3O43739 400 aa9.02□□□□□ -0.96
CNTNAP3B-205ENST00000476961 LDHCP07864 332 aa9.02□□□□□ -0.96
CNTNAP3B-205ENST00000476961 GSTA2P09210 222 aa9.02□□□□□ -0.96
CNTNAP3B-205ENST00000476961 ZSCAN22P10073 491 aaPredicted RBP9.02□□□□□ -0.96
CNTNAP3B-205ENST00000476961 PYGMP11217 842 aa9.02□□□□□ -0.96
CNTNAP3B-205ENST00000476961 ADORA1P30542 326 aa9.02□□□□□ -0.96
CNTNAP3B-205ENST00000476961 LSP1P33241 339 aa9.02□□□□□ -0.96
CNTNAP3B-205ENST00000476961 RFC5P40937 340 aa9.02□□□□□ -0.96
CNTNAP3B-205ENST00000476961 LSAMPQ13449 338 aa9.02□□□□□ -0.96
CNTNAP3B-205ENST00000476961 PTGISQ16647 500 aa9.02□□□□□ -0.96
CNTNAP3B-205ENST00000476961 MUM1Q2TAK8 710 aa9.02□□□□□ -0.96
CNTNAP3B-205ENST00000476961 SYDE2Q5VT97 1194 aa9.02□□□□□ -0.96
CNTNAP3B-205ENST00000476961 TMEM154Q6P9G4 183 aa9.02□□□□□ -0.96
CNTNAP3B-205ENST00000476961 LURAP1LQ8IV03 231 aa9.02□□□□□ -0.96
CNTNAP3B-205ENST00000476961 CNTROBQ8N137 903 aa9.02□□□□□ -0.96
CNTNAP3B-205ENST00000476961 NDUFAF2Q8N183 169 aa9.02□□□□□ -0.96
CNTNAP3B-205ENST00000476961 SIX5Q8N196 739 aa9.02□□□□□ -0.96
CNTNAP3B-205ENST00000476961 NOA1Q8NC60 698 aaKnown RBP9.02□□□□□ -0.96
CNTNAP3B-205ENST00000476961 MYCBPAPQ8TBZ2 947 aa9.02□□□□□ -0.96
CNTNAP3B-205ENST00000476961 IFT81Q8WYA0 676 aa9.02□□□□□ -0.96
CNTNAP3B-205ENST00000476961 FNBP1Q96RU3 617 aa9.02□□□□□ -0.96
CNTNAP3B-205ENST00000476961 RPS6KC1Q96S38 1066 aa9.02□□□□□ -0.96
CNTNAP3B-205ENST00000476961 CCT8L2Q96SF2 557 aa9.02□□□□□ -0.96
CNTNAP3B-205ENST00000476961 MROH5Q6ZUA9 1318 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms