RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 FZD1Q9UP38 647 aa18.16■□□□□ 0.5
TMEM53-208ENST00000476724 POTEB3A0JP26 581 aa18.16■□□□□ 0.5
TMEM53-208ENST00000476724 POTECB2RU33 542 aa18.16■□□□□ 0.5
TMEM53-208ENST00000476724 EPHB6O15197 1021 aa18.16■□□□□ 0.5
TMEM53-208ENST00000476724 AKR1B10O60218 316 aa18.16■□□□□ 0.5
TMEM53-208ENST00000476724 TACC1O75410 805 aa18.16■□□□□ 0.5
TMEM53-208ENST00000476724 ASNSP08243 561 aa18.16■□□□□ 0.5
TMEM53-208ENST00000476724 RHOXF2BP0C7M4 288 aa18.16■□□□□ 0.5
TMEM53-208ENST00000476724 PRLRP16471 622 aa18.16■□□□□ 0.5
TMEM53-208ENST00000476724 RPA1P27694 616 aa18.16■□□□□ 0.5
TMEM53-208ENST00000476724 SLC12A3P55017 1021 aa18.16■□□□□ 0.5
TMEM53-208ENST00000476724 CYP27A1Q02318 531 aa18.16■□□□□ 0.5
TMEM53-208ENST00000476724 MAPK8IP2Q13387 824 aaPredicted RBP18.16■□□□□ 0.5
TMEM53-208ENST00000476724 IQCEQ6IPM2 695 aa18.16■□□□□ 0.5
TMEM53-208ENST00000476724 PDXDC1Q6P996 788 aa18.16■□□□□ 0.5
TMEM53-208ENST00000476724 POTEBQ6S5H4 581 aa18.16■□□□□ 0.5
TMEM53-208ENST00000476724 ZC3H3Q8IXZ2 948 aaKnown RBP18.16■□□□□ 0.5
TMEM53-208ENST00000476724 GLIS3Q8NEA6 775 aa18.16■□□□□ 0.5
TMEM53-208ENST00000476724 RHOXF2Q9BQY4 288 aa18.16■□□□□ 0.5
TMEM53-208ENST00000476724 VCPKMTQ9H867 229 aa18.16■□□□□ 0.5
TMEM53-208ENST00000476724 GOPCQ9HD26 462 aa18.16■□□□□ 0.5
TMEM53-208ENST00000476724 CEP72Q9P209 647 aa18.16■□□□□ 0.5
TMEM53-208ENST00000476724 PRR12Q9ULL5 1215 aa18.16■□□□□ 0.5
TMEM53-208ENST00000476724 L1RE1Q9UN81 338 aa18.16■□□□□ 0.5
TMEM53-208ENST00000476724 JRKLQ9Y4A0 524 aa18.16■□□□□ 0.5
TMEM53-208ENST00000476724 LRRC53A6NM62 1247 aa18.15■□□□□ 0.5
TMEM53-208ENST00000476724 ZNF263O14978 683 aa18.15■□□□□ 0.5
TMEM53-208ENST00000476724 MED24O75448 989 aa18.15■□□□□ 0.5
TMEM53-208ENST00000476724 KRT18P05783 430 aaKnown RBP18.15■□□□□ 0.5
TMEM53-208ENST00000476724 EIF4A3P38919 411 aaKnown RBP18.15■□□□□ 0.5
TMEM53-208ENST00000476724 SPIRE1Q08AE8 756 aa18.15■□□□□ 0.5
TMEM53-208ENST00000476724 KCNMA1Q12791 1236 aa18.15■□□□□ 0.5
TMEM53-208ENST00000476724 RNF181Q9P0P0 153 aa18.15■□□□□ 0.5
TMEM53-208ENST00000476724 TFR2Q9UP52 801 aa18.15■□□□□ 0.5
TMEM53-208ENST00000476724 DNM3Q9UQ16 869 aa18.15■□□□□ 0.5
TMEM53-208ENST00000476724 STAT2P52630 851 aa18.14■□□□□ 0.5
TMEM53-208ENST00000476724 DGKZQ13574 1117 aa18.14■□□□□ 0.5
TMEM53-208ENST00000476724 USH1GQ495M9 461 aa18.14■□□□□ 0.5
TMEM53-208ENST00000476724 PRR16Q569H4 304 aa18.14■□□□□ 0.5
TMEM53-208ENST00000476724 SYT2Q8N9I0 419 aaPredicted RBP18.14■□□□□ 0.5
TMEM53-208ENST00000476724 NOA1Q8NC60 698 aaKnown RBP18.14■□□□□ 0.5
TMEM53-208ENST00000476724 SCFD1Q8WVM8 642 aa18.14■□□□□ 0.5
TMEM53-208ENST00000476724 KCTD10Q9H3F6 313 aa18.14■□□□□ 0.5
TMEM53-208ENST00000476724 SH2D4AQ9H788 454 aa18.14■□□□□ 0.5
TMEM53-208ENST00000476724 GGA3Q9NZ52 723 aa18.14■□□□□ 0.5
TMEM53-208ENST00000476724 HDAC6Q9UBN7 1215 aa18.14■□□□□ 0.5
TMEM53-208ENST00000476724 TARSL2A2RTX5 802 aaKnown RBP18.14■□□□□ 0.49
TMEM53-208ENST00000476724 PJA2O43164 708 aa18.14■□□□□ 0.49
TMEM53-208ENST00000476724 EIF3JO75822 258 aaKnown RBP18.14■□□□□ 0.49
TMEM53-208ENST00000476724 TFRCP02786 760 aaKnown RBP18.14■□□□□ 0.49
TMEM53-208ENST00000476724 PLEKP08567 350 aaPredicted RBP18.14■□□□□ 0.49
TMEM53-208ENST00000476724 CYP3A4P08684 503 aa18.14■□□□□ 0.49
TMEM53-208ENST00000476724 INPP5BP32019 993 aa18.14■□□□□ 0.49
TMEM53-208ENST00000476724 USP14P54578 494 aa18.14■□□□□ 0.49
TMEM53-208ENST00000476724 CATSPER3Q86XQ3 398 aa18.14■□□□□ 0.49
TMEM53-208ENST00000476724 TRIM59Q8IWR1 403 aa18.14■□□□□ 0.49
TMEM53-208ENST00000476724 ZNF341Q9BYN7 854 aa18.14■□□□□ 0.49
TMEM53-208ENST00000476724 ABCB6Q9NP58 842 aa18.14■□□□□ 0.49
TMEM53-208ENST00000476724 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.14■□□□□ 0.49
TMEM53-208ENST00000476724 DOCK1Q14185 1865 aa18.13■□□□□ 0.49
TMEM53-208ENST00000476724 MACROD2A1Z1Q3 448 aa18.13■□□□□ 0.49
TMEM53-208ENST00000476724 PIK3CDO00329 1044 aa18.13■□□□□ 0.49
TMEM53-208ENST00000476724 CETN3O15182 167 aa18.13■□□□□ 0.49
TMEM53-208ENST00000476724 OAS2P29728 719 aaKnown RBP18.13■□□□□ 0.49
TMEM53-208ENST00000476724 VSNL1P62760 191 aa18.13■□□□□ 0.49
TMEM53-208ENST00000476724 MMS19Q96T76 1030 aa18.13■□□□□ 0.49
TMEM53-208ENST00000476724 MAGEA1P43355 309 aa18.13■□□□□ 0.49
TMEM53-208ENST00000476724 ADAM9Q13443 819 aa18.13■□□□□ 0.49
TMEM53-208ENST00000476724 ASTE1Q2TB18 679 aaPredicted RBP18.13■□□□□ 0.49
TMEM53-208ENST00000476724 SLC9C1Q4G0N8 1177 aa18.13■□□□□ 0.49
TMEM53-208ENST00000476724 ARSHQ5FYA8 562 aa18.13■□□□□ 0.49
TMEM53-208ENST00000476724 ILDR2Q71H61 639 aa18.13■□□□□ 0.49
TMEM53-208ENST00000476724 KRT26Q7Z3Y9 468 aa18.13■□□□□ 0.49
TMEM53-208ENST00000476724 LENG9Q96B70 501 aa18.13■□□□□ 0.49
TMEM53-208ENST00000476724 ALS2CR12Q96Q35 445 aa18.13■□□□□ 0.49
TMEM53-208ENST00000476724 LUC7LQ9NQ29 371 aaKnown RBP18.13■□□□□ 0.49
TMEM53-208ENST00000476724 TBC1D7Q9P0N9 293 aa18.13■□□□□ 0.49
TMEM53-208ENST00000476724 DUSP10Q9Y6W6 482 aa18.13■□□□□ 0.49
TMEM53-208ENST00000476724 RBAK-RBAKDNI3L0D1 243 aa18.12■□□□□ 0.49
TMEM53-208ENST00000476724 STAT3P40763 770 aa18.12■□□□□ 0.49
TMEM53-208ENST00000476724 MAP9Q49MG5 647 aa18.12■□□□□ 0.49
TMEM53-208ENST00000476724 APOBEC3FQ8IUX4 373 aaKnown RBP18.12■□□□□ 0.49
TMEM53-208ENST00000476724 RNF10Q8N5U6 811 aaKnown RBP18.12■□□□□ 0.49
TMEM53-208ENST00000476724 JADE2Q9NQC1 790 aa18.12■□□□□ 0.49
TMEM53-208ENST00000476724 FBXO28Q9NVF7 368 aa18.12■□□□□ 0.49
TMEM53-208ENST00000476724 TRAF3IP3Q9Y228 551 aa18.12■□□□□ 0.49
TMEM53-208ENST00000476724 SERPING1P05155 500 aa18.11■□□□□ 0.49
TMEM53-208ENST00000476724 SPATA31C1P0DKV0 1188 aa18.11■□□□□ 0.49
TMEM53-208ENST00000476724 ITIH3Q06033 890 aa18.11■□□□□ 0.49
TMEM53-208ENST00000476724 GIT2Q14161 759 aa18.11■□□□□ 0.49
TMEM53-208ENST00000476724 SFMBT2Q5VUG0 894 aa18.11■□□□□ 0.49
TMEM53-208ENST00000476724 NELFCDQ8IXH7 590 aa18.11■□□□□ 0.49
TMEM53-208ENST00000476724 P2RX7Q99572 595 aaKnown RBP18.11■□□□□ 0.49
TMEM53-208ENST00000476724 POLR3CQ9BUI4 534 aaPredicted RBP18.11■□□□□ 0.49
TMEM53-208ENST00000476724 ACBD3Q9H3P7 528 aa18.11■□□□□ 0.49
TMEM53-208ENST00000476724 SNX12Q9UMY4 172 aa18.11■□□□□ 0.49
TMEM53-208ENST00000476724 NPHP3-ACAD11A0A0J9YXS1 232 aa18.11■□□□□ 0.49
TMEM53-208ENST00000476724 POTEFA5A3E0 1075 aa18.11■□□□□ 0.49
TMEM53-208ENST00000476724 CTNND1O60716 968 aaKnown RBP18.11■□□□□ 0.49
TMEM53-208ENST00000476724 POTEIP0CG38 1075 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms