RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 TECTAO75443 2155 aa13.81□□□□□ -0.2
HDAC6-219ENST00000476625 STXBP3O00186 592 aa13.8□□□□□ -0.2
HDAC6-219ENST00000476625 DGKIO75912 1065 aa13.8□□□□□ -0.2
HDAC6-219ENST00000476625 GLP2RO95838 553 aa13.8□□□□□ -0.2
HDAC6-219ENST00000476625 ITGB1P05556 798 aa13.8□□□□□ -0.2
HDAC6-219ENST00000476625 ITGB5P18084 799 aa13.8□□□□□ -0.2
HDAC6-219ENST00000476625 PCNX4Q63HM2 1172 aa13.8□□□□□ -0.2
HDAC6-219ENST00000476625 CLP1Q92989 425 aaKnown RBP13.8□□□□□ -0.2
HDAC6-219ENST00000476625 PGBD1Q96JS3 809 aa13.8□□□□□ -0.2
HDAC6-219ENST00000476625 PCYT2Q99447 389 aa13.8□□□□□ -0.2
HDAC6-219ENST00000476625 C11orf84Q9BUA3 381 aaPredicted RBP13.8□□□□□ -0.2
HDAC6-219ENST00000476625 PRKAG3Q9UGI9 489 aa13.8□□□□□ -0.2
HDAC6-219ENST00000476625 CD207Q9UJ71 328 aa13.8□□□□□ -0.2
HDAC6-219ENST00000476625 TUBE1Q9UJT0 475 aa13.8□□□□□ -0.2
HDAC6-219ENST00000476625 ZNF215Q9UL58 517 aaPredicted RBP13.8□□□□□ -0.2
HDAC6-219ENST00000476625 PLAGL2Q9UPG8 496 aa13.8□□□□□ -0.2
HDAC6-219ENST00000476625 PPFIA3O75145 1194 aa13.79□□□□□ -0.2
HDAC6-219ENST00000476625 MMP1P03956 469 aa13.79□□□□□ -0.2
HDAC6-219ENST00000476625 GNAT1P11488 350 aa13.79□□□□□ -0.2
HDAC6-219ENST00000476625 NDUFV1P49821 464 aa13.79□□□□□ -0.2
HDAC6-219ENST00000476625 ADAM15Q13444 863 aa13.79□□□□□ -0.2
HDAC6-219ENST00000476625 SMAD4Q13485 552 aaKnown RBP13.79□□□□□ -0.2
HDAC6-219ENST00000476625 TMEM266Q2M3C6 531 aa13.79□□□□□ -0.2
HDAC6-219ENST00000476625 SAMD3Q8N6K7 520 aa13.79□□□□□ -0.2
HDAC6-219ENST00000476625 KLHL23Q8NBE8 558 aa13.79□□□□□ -0.2
HDAC6-219ENST00000476625 MSLNLQ96KJ4 702 aa13.79□□□□□ -0.2
HDAC6-219ENST00000476625 RWDD1Q9H446 243 aaPredicted RBP13.79□□□□□ -0.2
HDAC6-219ENST00000476625 NRCAMQ92823 1304 aa13.79□□□□□ -0.2
HDAC6-219ENST00000476625 HIP1O00291 1037 aa13.78□□□□□ -0.2
HDAC6-219ENST00000476625 PER2O15055 1255 aa13.78□□□□□ -0.2
HDAC6-219ENST00000476625 MGEA5O60502 916 aa13.78□□□□□ -0.2
HDAC6-219ENST00000476625 RB1P06400 928 aa13.78□□□□□ -0.2
HDAC6-219ENST00000476625 NRIP1P48552 1158 aa13.78□□□□□ -0.2
HDAC6-219ENST00000476625 MRPS6P82932 125 aaKnown RBP13.78□□□□□ -0.2
HDAC6-219ENST00000476625 TSHZ1Q6ZSZ6 1077 aa13.78□□□□□ -0.2
HDAC6-219ENST00000476625 MB21D2Q8IYB1 491 aaPredicted RBP13.78□□□□□ -0.2
HDAC6-219ENST00000476625 ZNF654Q8IZM8 581 aa13.78□□□□□ -0.2
HDAC6-219ENST00000476625 CRIPAKQ8N1N5 446 aa13.78□□□□□ -0.2
HDAC6-219ENST00000476625 SRBD1Q8N5C6 995 aaKnown RBP13.78□□□□□ -0.2
HDAC6-219ENST00000476625 VN1R2Q8NFZ6 395 aa13.78□□□□□ -0.2
HDAC6-219ENST00000476625 SPPL3Q8TCT6 385 aa13.78□□□□□ -0.2
HDAC6-219ENST00000476625 IGDCC4Q8TDY8 1250 aa13.78□□□□□ -0.2
HDAC6-219ENST00000476625 TMX1Q9H3N1 280 aa13.78□□□□□ -0.2
HDAC6-219ENST00000476625 LY9Q9HBG7 655 aa13.78□□□□□ -0.2
HDAC6-219ENST00000476625 FAM86C1Q9NVL1 165 aa13.78□□□□□ -0.2
HDAC6-219ENST00000476625 CDH22Q9UJ99 828 aa13.78□□□□□ -0.2
HDAC6-219ENST00000476625 EVPLQ92817 2033 aa13.78□□□□□ -0.2
HDAC6-219ENST00000476625 MBLAC1A4D2B0 266 aaPredicted RBP13.77□□□□□ -0.21
HDAC6-219ENST00000476625 INSRRP14616 1297 aa13.77□□□□□ -0.21
HDAC6-219ENST00000476625 SP100P23497 879 aaPredicted RBP13.77□□□□□ -0.21
HDAC6-219ENST00000476625 NT5C2P49902 561 aa13.77□□□□□ -0.21
HDAC6-219ENST00000476625 TRDNQ13061 729 aa13.77□□□□□ -0.21
HDAC6-219ENST00000476625 HERC4Q5GLZ8 1057 aaPredicted RBP13.77□□□□□ -0.21
HDAC6-219ENST00000476625 TTC22Q5TAA0 569 aa13.77□□□□□ -0.21
HDAC6-219ENST00000476625 CCDC82Q8N4S0 544 aa13.77□□□□□ -0.21
HDAC6-219ENST00000476625 CYP2W1Q8TAV3 490 aa13.77□□□□□ -0.21
HDAC6-219ENST00000476625 POF1BQ8WVV4 589 aa13.77□□□□□ -0.21
HDAC6-219ENST00000476625 GLG1Q92896 1179 aa13.77□□□□□ -0.21
HDAC6-219ENST00000476625 PPP1R16BQ96T49 567 aa13.77□□□□□ -0.21
HDAC6-219ENST00000476625 APOL5Q9BWW9 433 aa13.77□□□□□ -0.21
HDAC6-219ENST00000476625 LMAN2LQ9H0V9 348 aa13.77□□□□□ -0.21
HDAC6-219ENST00000476625 CDHR5Q9HBB8 845 aa13.77□□□□□ -0.21
HDAC6-219ENST00000476625 FAM50BQ9Y247 325 aa13.77□□□□□ -0.21
HDAC6-219ENST00000476625 PLXNA3P51805 1871 aa13.76□□□□□ -0.21
HDAC6-219ENST00000476625 ERICH2A1L162 156 aa13.76□□□□□ -0.21
HDAC6-219ENST00000476625 STAM2O75886 525 aa13.76□□□□□ -0.21
HDAC6-219ENST00000476625 CHMLP26374 656 aa13.76□□□□□ -0.21
HDAC6-219ENST00000476625 CATIPQ7Z7H3 387 aa13.76□□□□□ -0.21
HDAC6-219ENST00000476625 RALYLQ86SE5 291 aaKnown RBP13.76□□□□□ -0.21
HDAC6-219ENST00000476625 NLRX1Q86UT6 975 aa13.76□□□□□ -0.21
HDAC6-219ENST00000476625 NCOA7Q8NI08 942 aa13.76□□□□□ -0.21
HDAC6-219ENST00000476625 SEPT1Q8WYJ6 367 aa13.76□□□□□ -0.21
HDAC6-219ENST00000476625 RRP36Q96EU6 259 aaKnown RBP13.76□□□□□ -0.21
HDAC6-219ENST00000476625 SENP7Q9BQF6 1050 aa13.76□□□□□ -0.21
HDAC6-219ENST00000476625 LRRC2Q9BYS8 371 aa13.76□□□□□ -0.21
HDAC6-219ENST00000476625 ERAP1Q9NZ08 941 aa13.76□□□□□ -0.21
HDAC6-219ENST00000476625 PADI3Q9ULW8 664 aa13.76□□□□□ -0.21
HDAC6-219ENST00000476625 USP15Q9Y4E8 981 aaPredicted RBP13.76□□□□□ -0.21
HDAC6-219ENST00000476625 UBIAD1Q9Y5Z9 338 aa13.76□□□□□ -0.21
HDAC6-219ENST00000476625 TRIOO75962 3097 aa13.76□□□□□ -0.21
HDAC6-219ENST00000476625 WDR81Q562E7 1941 aa13.75□□□□□ -0.21
HDAC6-219ENST00000476625 TMEM221A6NGB7 291 aa13.75□□□□□ -0.21
HDAC6-219ENST00000476625 M0R296 226 aa13.75□□□□□ -0.21
HDAC6-219ENST00000476625 PIK3CDO00329 1044 aa13.75□□□□□ -0.21
HDAC6-219ENST00000476625 VCPP55072 806 aaKnown RBP13.75□□□□□ -0.21
HDAC6-219ENST00000476625 APOBRQ0VD83 1088 aa13.75□□□□□ -0.21
HDAC6-219ENST00000476625 MTMR1Q13613 665 aa13.75□□□□□ -0.21
HDAC6-219ENST00000476625 PLCB4Q15147 1175 aa13.75□□□□□ -0.21
HDAC6-219ENST00000476625 TAF2Q6P1X5 1199 aa13.75□□□□□ -0.21
HDAC6-219ENST00000476625 CMTR2Q8IYT2 770 aaKnown RBP13.75□□□□□ -0.21
HDAC6-219ENST00000476625 EDAQ92838 391 aa13.75□□□□□ -0.21
HDAC6-219ENST00000476625 CUL5Q93034 780 aa13.75□□□□□ -0.21
HDAC6-219ENST00000476625 GPRASP2Q96D09 838 aa13.75□□□□□ -0.21
HDAC6-219ENST00000476625 SPZ1Q9BXG8 430 aa13.75□□□□□ -0.21
HDAC6-219ENST00000476625 TRPC6Q9Y210 931 aa13.75□□□□□ -0.21
HDAC6-219ENST00000476625 TRPV2Q9Y5S1 764 aa13.75□□□□□ -0.21
HDAC6-219ENST00000476625 LOC730098B7Z3J9 87 aa13.74□□□□□ -0.21
HDAC6-219ENST00000476625 PDGFBP01127 241 aaPredicted RBP13.74□□□□□ -0.21
HDAC6-219ENST00000476625 ARP10275 920 aa13.74□□□□□ -0.21
HDAC6-219ENST00000476625 TCF15Q12870 199 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms