RNA–Protein interactions for RNA: ENST00000476428.1

MAP1LC3A-204, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 5

Gene MAP1LC3A, Length 851 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-204ENST00000476428 MFSD5Q6N075 450 aa23.71■■□□□ 1.39
MAP1LC3A-204ENST00000476428 POTEDQ86YR6 584 aa23.71■■□□□ 1.39
MAP1LC3A-204ENST00000476428 NOSTRINQ8IVI9 506 aa23.71■■□□□ 1.39
MAP1LC3A-204ENST00000476428 CCDC60Q8IWA6 550 aaPredicted RBP23.71■■□□□ 1.39
MAP1LC3A-204ENST00000476428 HAS1Q92839 578 aa23.71■■□□□ 1.39
MAP1LC3A-204ENST00000476428 FAM20AQ96MK3 541 aa23.71■■□□□ 1.39
MAP1LC3A-204ENST00000476428 PCDHA10Q9Y5I2 948 aa23.71■■□□□ 1.39
MAP1LC3A-204ENST00000476428 PSAPP07602 524 aa23.7■■□□□ 1.38
MAP1LC3A-204ENST00000476428 PLCB4Q15147 1175 aa23.7■■□□□ 1.38
MAP1LC3A-204ENST00000476428 FAM160B1Q5W0V3 765 aa23.7■■□□□ 1.38
MAP1LC3A-204ENST00000476428 LARP1BQ659C4 914 aaKnown RBP23.7■■□□□ 1.38
MAP1LC3A-204ENST00000476428 B3GNT9Q6UX72 402 aa23.7■■□□□ 1.38
MAP1LC3A-204ENST00000476428 AFAP1L1Q8TED9 768 aa23.7■■□□□ 1.38
MAP1LC3A-204ENST00000476428 LRCH3Q96II8 777 aa23.7■■□□□ 1.38
MAP1LC3A-204ENST00000476428 UBE2OQ9C0C9 1292 aaKnown RBP23.7■■□□□ 1.38
MAP1LC3A-204ENST00000476428 ZNF302Q9NR11 478 aa23.7■■□□□ 1.38
MAP1LC3A-204ENST00000476428 DISC1Q9NRI5 854 aa23.7■■□□□ 1.38
MAP1LC3A-204ENST00000476428 A0A1W2PPC1 479 aa23.69■■□□□ 1.38
MAP1LC3A-204ENST00000476428 WDR64B1ANS9 1081 aa23.69■■□□□ 1.38
MAP1LC3A-204ENST00000476428 H3BQV1 296 aa23.69■■□□□ 1.38
MAP1LC3A-204ENST00000476428 TBX3O15119 743 aa23.69■■□□□ 1.38
MAP1LC3A-204ENST00000476428 CHMP2AO43633 222 aa23.69■■□□□ 1.38
MAP1LC3A-204ENST00000476428 DHX38Q92620 1227 aaKnown RBP23.69■■□□□ 1.38
MAP1LC3A-204ENST00000476428 ATP6V0A1Q93050 837 aa23.69■■□□□ 1.38
MAP1LC3A-204ENST00000476428 INTS4Q96HW7 963 aaKnown RBP23.69■■□□□ 1.38
MAP1LC3A-204ENST00000476428 SAMM50Q9Y512 469 aa23.69■■□□□ 1.38
MAP1LC3A-204ENST00000476428 DNAH12Q6ZR08 3092 aa23.69■■□□□ 1.38
MAP1LC3A-204ENST00000476428 NRCAMQ92823 1304 aa23.68■■□□□ 1.38
MAP1LC3A-204ENST00000476428 TREHO43280 583 aa23.68■■□□□ 1.38
MAP1LC3A-204ENST00000476428 MARCH6O60337 910 aa23.68■■□□□ 1.38
MAP1LC3A-204ENST00000476428 GNAT1P11488 350 aa23.68■■□□□ 1.38
MAP1LC3A-204ENST00000476428 SFNP31947 248 aa23.68■■□□□ 1.38
MAP1LC3A-204ENST00000476428 CCL23P55773 120 aa23.68■■□□□ 1.38
MAP1LC3A-204ENST00000476428 ADAM17P78536 824 aa23.68■■□□□ 1.38
MAP1LC3A-204ENST00000476428 PPFIA1Q13136 1202 aa23.68■■□□□ 1.38
MAP1LC3A-204ENST00000476428 PTK7Q13308 1070 aa23.68■■□□□ 1.38
MAP1LC3A-204ENST00000476428 PDXDC2PQ6P474 469 aa23.68■■□□□ 1.38
MAP1LC3A-204ENST00000476428 MIER3Q7Z3K6 550 aa23.68■■□□□ 1.38
MAP1LC3A-204ENST00000476428 LMBR1Q8WVP7 490 aa23.68■■□□□ 1.38
MAP1LC3A-204ENST00000476428 WNT8AQ9H1J5 351 aa23.68■■□□□ 1.38
MAP1LC3A-204ENST00000476428 GABBR1Q9UBS5 961 aa23.68■■□□□ 1.38
MAP1LC3A-204ENST00000476428 MAFBQ9Y5Q3 323 aaPredicted RBP23.68■■□□□ 1.38
MAP1LC3A-204ENST00000476428 BAG4O95429 457 aaKnown RBP23.67■■□□□ 1.38
MAP1LC3A-204ENST00000476428 INSRRP14616 1297 aa23.67■■□□□ 1.38
MAP1LC3A-204ENST00000476428 ATP4AP20648 1035 aa23.67■■□□□ 1.38
MAP1LC3A-204ENST00000476428 SLC26A2P50443 739 aa23.67■■□□□ 1.38
MAP1LC3A-204ENST00000476428 JAK3P52333 1124 aa23.67■■□□□ 1.38
MAP1LC3A-204ENST00000476428 EPHB4P54760 987 aa23.67■■□□□ 1.38
MAP1LC3A-204ENST00000476428 FPGSQ05932 587 aa23.67■■□□□ 1.38
MAP1LC3A-204ENST00000476428 BFSP2Q13515 415 aa23.67■■□□□ 1.38
MAP1LC3A-204ENST00000476428 GRIK4Q16099 956 aa23.67■■□□□ 1.38
MAP1LC3A-204ENST00000476428 MCTP1Q6DN14 999 aa23.67■■□□□ 1.38
MAP1LC3A-204ENST00000476428 TMEM199Q8N511 208 aa23.67■■□□□ 1.38
MAP1LC3A-204ENST00000476428 WNT8BQ93098 351 aa23.67■■□□□ 1.38
MAP1LC3A-204ENST00000476428 FOXD4L1Q9NU39 408 aa23.67■■□□□ 1.38
MAP1LC3A-204ENST00000476428 VAV3Q9UKW4 847 aa23.67■■□□□ 1.38
MAP1LC3A-204ENST00000476428 POTEB3A0JP26 581 aa23.66■■□□□ 1.38
MAP1LC3A-204ENST00000476428 CSF2RAP15509 400 aa23.66■■□□□ 1.38
MAP1LC3A-204ENST00000476428 MCM7P33993 719 aa23.66■■□□□ 1.38
MAP1LC3A-204ENST00000476428 PPP2R5CQ13362 524 aa23.66■■□□□ 1.38
MAP1LC3A-204ENST00000476428 ZNF174Q15697 407 aa23.66■■□□□ 1.38
MAP1LC3A-204ENST00000476428 CALCRLQ16602 461 aa23.66■■□□□ 1.38
MAP1LC3A-204ENST00000476428 TRIM71Q2Q1W2 868 aaKnown RBP23.66■■□□□ 1.38
MAP1LC3A-204ENST00000476428 POTEBQ6S5H4 581 aa23.66■■□□□ 1.38
MAP1LC3A-204ENST00000476428 SERINC5Q86VE9 423 aa23.66■■□□□ 1.38
MAP1LC3A-204ENST00000476428 HSCBQ8IWL3 235 aa23.66■■□□□ 1.38
MAP1LC3A-204ENST00000476428 SLFN12Q8IYM2 578 aa23.66■■□□□ 1.38
MAP1LC3A-204ENST00000476428 RETREG2Q8NC44 543 aa23.66■■□□□ 1.38
MAP1LC3A-204ENST00000476428 RDM1Q8NG50 284 aa23.66■■□□□ 1.38
MAP1LC3A-204ENST00000476428 CAGE1Q8TC20 777 aa23.66■■□□□ 1.38
MAP1LC3A-204ENST00000476428 TRPC6Q9Y210 931 aa23.66■■□□□ 1.38
MAP1LC3A-204ENST00000476428 CUL9Q8IWT3 2517 aa23.65■■□□□ 1.38
MAP1LC3A-204ENST00000476428 EML1O00423 815 aa23.65■■□□□ 1.38
MAP1LC3A-204ENST00000476428 PITPNM1O00562 1244 aa23.65■■□□□ 1.38
MAP1LC3A-204ENST00000476428 NEMFO60524 1076 aa23.65■■□□□ 1.38
MAP1LC3A-204ENST00000476428 TRAPPC10P48553 1259 aa23.65■■□□□ 1.38
MAP1LC3A-204ENST00000476428 TTC38Q5R3I4 469 aa23.65■■□□□ 1.38
MAP1LC3A-204ENST00000476428 CCDC155Q8N6L0 562 aa23.65■■□□□ 1.38
MAP1LC3A-204ENST00000476428 ATP8B4Q8TF62 1192 aa23.65■■□□□ 1.38
MAP1LC3A-204ENST00000476428 TNPO1Q92973 898 aaKnown RBP23.65■■□□□ 1.38
MAP1LC3A-204ENST00000476428 SCLYQ96I15 445 aa23.65■■□□□ 1.38
MAP1LC3A-204ENST00000476428 MTMR9Q96QG7 549 aa23.65■■□□□ 1.38
MAP1LC3A-204ENST00000476428 TMEM60Q9H2L4 133 aa23.65■■□□□ 1.38
MAP1LC3A-204ENST00000476428 NOL7Q9UMY1 257 aaKnown RBP23.65■■□□□ 1.38
MAP1LC3A-204ENST00000476428 RRN3P2A6NIE6 340 aa23.64■■□□□ 1.37
MAP1LC3A-204ENST00000476428 HBP1O60381 514 aa23.64■■□□□ 1.37
MAP1LC3A-204ENST00000476428 TOB1P50616 345 aaPredicted RBP23.64■■□□□ 1.37
MAP1LC3A-204ENST00000476428 IGBP1P78318 339 aa23.64■■□□□ 1.37
MAP1LC3A-204ENST00000476428 RBL2Q08999 1139 aa23.64■■□□□ 1.37
MAP1LC3A-204ENST00000476428 PPIGQ13427 754 aaKnown RBP eCLIP23.64■■□□□ 1.37
MAP1LC3A-204ENST00000476428 MARCH8Q5T0T0 291 aa23.64■■□□□ 1.37
MAP1LC3A-204ENST00000476428 ZNF862O60290 1169 aa23.63■■□□□ 1.37
MAP1LC3A-204ENST00000476428 IQCF3P0C7M6 154 aa23.63■■□□□ 1.37
MAP1LC3A-204ENST00000476428 CKBP12277 381 aa23.63■■□□□ 1.37
MAP1LC3A-204ENST00000476428 UGCGQ16739 394 aa23.63■■□□□ 1.37
MAP1LC3A-204ENST00000476428 C16orf59Q7L2K0 433 aa23.63■■□□□ 1.37
MAP1LC3A-204ENST00000476428 CKAP2LQ8IYA6 745 aa23.63■■□□□ 1.37
MAP1LC3A-204ENST00000476428 TRAPPC12Q8WVT3 735 aa23.63■■□□□ 1.37
MAP1LC3A-204ENST00000476428 IGSF9BQ9UPX0 1349 aa23.62■■□□□ 1.37
MAP1LC3A-204ENST00000476428 MBLAC1A4D2B0 266 aaPredicted RBP23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms