RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 MICU3Q86XE3 530 aa15.03■□□□□ -0
MRPL55-228ENST00000476267 TEX2Q8IWB9 1127 aa15.03■□□□□ -0
MRPL55-228ENST00000476267 BANK1Q8NDB2 785 aa15.03■□□□□ -0
MRPL55-228ENST00000476267 CYP2W1Q8TAV3 490 aa15.03■□□□□ -0
MRPL55-228ENST00000476267 DNAJB3Q8WWF6 145 aa15.03■□□□□ -0
MRPL55-228ENST00000476267 CLP1Q92989 425 aaKnown RBP15.03■□□□□ -0
MRPL55-228ENST00000476267 ZBTB10Q96DT7 871 aa15.03■□□□□ -0
MRPL55-228ENST00000476267 IL17RAQ96F46 866 aa15.03■□□□□ -0
MRPL55-228ENST00000476267 MXRA8Q9BRK3 442 aa15.03■□□□□ -0
MRPL55-228ENST00000476267 SMARCAD1Q9H4L7 1026 aa15.03■□□□□ -0
MRPL55-228ENST00000476267 AGO3Q9H9G7 860 aaKnown RBP15.03■□□□□ -0
MRPL55-228ENST00000476267 KCNH7Q9NS40 1196 aa15.03■□□□□ -0
MRPL55-228ENST00000476267 PKD2L1Q9P0L9 805 aa15.03■□□□□ -0
MRPL55-228ENST00000476267 LOXHD1Q8IVV2 1947 aa15.03■□□□□ -0
MRPL55-228ENST00000476267 NCOR1O75376 2440 aa15.03■□□□□ -0
MRPL55-228ENST00000476267 TTC3P53804 2025 aa15.02■□□□□ -0
MRPL55-228ENST00000476267 NFASCO94856 1347 aa15.02■□□□□ -0
MRPL55-228ENST00000476267 PI4K2BG5E9Z4 385 aa15.02■□□□□ -0
MRPL55-228ENST00000476267 GPR37L1O60883 481 aa15.02■□□□□ -0
MRPL55-228ENST00000476267 TCEAL5Q5H9L2 206 aa15.02■□□□□ -0
MRPL55-228ENST00000476267 TSHZ1Q6ZSZ6 1077 aa15.02■□□□□ -0
MRPL55-228ENST00000476267 HEATR3Q7Z4Q2 680 aa15.02■□□□□ -0
MRPL55-228ENST00000476267 PABPC5Q96DU9 382 aaKnown RBP15.02■□□□□ -0
MRPL55-228ENST00000476267 NSUN3Q9H649 340 aaKnown RBP15.02■□□□□ -0
MRPL55-228ENST00000476267 JPH1Q9HDC5 661 aaPredicted RBP15.02■□□□□ -0
MRPL55-228ENST00000476267 RIC8AQ9NPQ8 531 aa15.02■□□□□ -0
MRPL55-228ENST00000476267 ANO2Q9NQ90 1003 aa15.02■□□□□ -0
MRPL55-228ENST00000476267 SLC9A2Q9UBY0 812 aa15.02■□□□□ -0
MRPL55-228ENST00000476267 CDY2AQ9Y6F7 541 aa15.02■□□□□ -0
MRPL55-228ENST00000476267 C5orf42Q9H799 3197 aa15.01□□□□□ -0.01
MRPL55-228ENST00000476267 IGKV6D-21A0A0A0MT36 114 aa15.01□□□□□ -0.01
MRPL55-228ENST00000476267 DGKIO75912 1065 aa15.01□□□□□ -0.01
MRPL55-228ENST00000476267 ATG7O95352 703 aa15.01□□□□□ -0.01
MRPL55-228ENST00000476267 RB1P06400 928 aa15.01□□□□□ -0.01
MRPL55-228ENST00000476267 INSRRP14616 1297 aa15.01□□□□□ -0.01
MRPL55-228ENST00000476267 BMPR1AP36894 532 aa15.01□□□□□ -0.01
MRPL55-228ENST00000476267 LTBRP36941 435 aa15.01□□□□□ -0.01
MRPL55-228ENST00000476267 CLK2P49760 499 aaKnown RBP15.01□□□□□ -0.01
MRPL55-228ENST00000476267 MRPS6P82932 125 aaKnown RBP15.01□□□□□ -0.01
MRPL55-228ENST00000476267 ITGB3BPQ13352 177 aaPredicted RBP15.01□□□□□ -0.01
MRPL55-228ENST00000476267 CTC1Q2NKJ3 1217 aa15.01□□□□□ -0.01
MRPL55-228ENST00000476267 PTCRAQ6ISU1 281 aaPredicted RBP15.01□□□□□ -0.01
MRPL55-228ENST00000476267 PPP1R18Q6NYC8 613 aa15.01□□□□□ -0.01
MRPL55-228ENST00000476267 RSPH3Q86UC2 560 aa15.01□□□□□ -0.01
MRPL55-228ENST00000476267 RTN4RL1Q86UN2 441 aaPredicted RBP15.01□□□□□ -0.01
MRPL55-228ENST00000476267 FIBCD1Q8N539 461 aa15.01□□□□□ -0.01
MRPL55-228ENST00000476267 GLG1Q92896 1179 aa15.01□□□□□ -0.01
MRPL55-228ENST00000476267 FAM217BQ9NTX9 383 aaPredicted RBP15.01□□□□□ -0.01
MRPL55-228ENST00000476267 BRPF3Q9ULD4 1205 aa15.01□□□□□ -0.01
MRPL55-228ENST00000476267 ARIH1Q9Y4X5 557 aaPredicted RBP15.01□□□□□ -0.01
MRPL55-228ENST00000476267 SQORQ9Y6N5 450 aa15.01□□□□□ -0.01
MRPL55-228ENST00000476267 BRWD1Q9NSI6 2320 aa15□□□□□ -0.01
MRPL55-228ENST00000476267 POTEB3A0JP26 581 aa15□□□□□ -0.01
MRPL55-228ENST00000476267 RRN3P2A6NIE6 340 aa15□□□□□ -0.01
MRPL55-228ENST00000476267 STXBP3O00186 592 aa15□□□□□ -0.01
MRPL55-228ENST00000476267 GRM6O15303 877 aa15□□□□□ -0.01
MRPL55-228ENST00000476267 RPLP2P05387 115 aaKnown RBP15□□□□□ -0.01
MRPL55-228ENST00000476267 ARP10275 920 aa15□□□□□ -0.01
MRPL55-228ENST00000476267 CTNNB1P35222 781 aa15□□□□□ -0.01
MRPL55-228ENST00000476267 ACTR2P61160 394 aa15□□□□□ -0.01
MRPL55-228ENST00000476267 CAMK1Q14012 370 aa15□□□□□ -0.01
MRPL55-228ENST00000476267 PLCB4Q15147 1175 aa15□□□□□ -0.01
MRPL55-228ENST00000476267 PUS10Q3MIT2 529 aaKnown RBP15□□□□□ -0.01
MRPL55-228ENST00000476267 ADCK5Q3MIX3 580 aa15□□□□□ -0.01
MRPL55-228ENST00000476267 TSGA10IPQ3SY00 556 aa15□□□□□ -0.01
MRPL55-228ENST00000476267 BMP2KLQ5H9B9 411 aa15□□□□□ -0.01
MRPL55-228ENST00000476267 TMEM31Q5JXX7 168 aa15□□□□□ -0.01
MRPL55-228ENST00000476267 POTEBQ6S5H4 581 aa15□□□□□ -0.01
MRPL55-228ENST00000476267 PLPPR4Q7Z2D5 763 aa15□□□□□ -0.01
MRPL55-228ENST00000476267 SKAP1Q86WV1 359 aa15□□□□□ -0.01
MRPL55-228ENST00000476267 RASEFQ8IZ41 740 aa15□□□□□ -0.01
MRPL55-228ENST00000476267 CRYGNQ8WXF5 182 aa15□□□□□ -0.01
MRPL55-228ENST00000476267 PGBD1Q96JS3 809 aa15□□□□□ -0.01
MRPL55-228ENST00000476267 LMAN2LQ9H0V9 348 aa15□□□□□ -0.01
MRPL55-228ENST00000476267 AGO4Q9HCK5 861 aaKnown RBP15□□□□□ -0.01
MRPL55-228ENST00000476267 RBM28Q9NW13 759 aaKnown RBP15□□□□□ -0.01
MRPL55-228ENST00000476267 IGSF9BQ9UPX0 1349 aa14.99□□□□□ -0.01
MRPL55-228ENST00000476267 KDM3AQ9Y4C1 1321 aa14.99□□□□□ -0.01
MRPL55-228ENST00000476267 H3BQ06 376 aaPredicted RBP14.99□□□□□ -0.01
MRPL55-228ENST00000476267 hCG_1984214I3L0E3 225 aa14.99□□□□□ -0.01
MRPL55-228ENST00000476267 MEIS1O00470 390 aa14.99□□□□□ -0.01
MRPL55-228ENST00000476267 CD52P31358 61 aa14.99□□□□□ -0.01
MRPL55-228ENST00000476267 SREBF1P36956 1147 aa14.99□□□□□ -0.01
MRPL55-228ENST00000476267 IGBP1P78318 339 aa14.99□□□□□ -0.01
MRPL55-228ENST00000476267 CEP55Q53EZ4 464 aa14.99□□□□□ -0.01
MRPL55-228ENST00000476267 GJD3Q8N144 294 aa14.99□□□□□ -0.01
MRPL55-228ENST00000476267 ZNF713Q8N859 430 aaPredicted RBP14.99□□□□□ -0.01
MRPL55-228ENST00000476267 TRAPPC12Q8WVT3 735 aa14.99□□□□□ -0.01
MRPL55-228ENST00000476267 TCEANC2Q96MN5 208 aa14.99□□□□□ -0.01
MRPL55-228ENST00000476267 NEK1Q96PY6 1258 aa14.99□□□□□ -0.01
MRPL55-228ENST00000476267 C11orf84Q9BUA3 381 aaPredicted RBP14.99□□□□□ -0.01
MRPL55-228ENST00000476267 ANO3Q9BYT9 981 aa14.99□□□□□ -0.01
MRPL55-228ENST00000476267 RWDD3Q9Y3V2 267 aa14.99□□□□□ -0.01
MRPL55-228ENST00000476267 PCDHA2Q9Y5H9 948 aa14.99□□□□□ -0.01
MRPL55-228ENST00000476267 PLXNA4Q9HCM2 1894 aa14.99□□□□□ -0.01
MRPL55-228ENST00000476267 CCNE2O96020 404 aa14.98□□□□□ -0.01
MRPL55-228ENST00000476267 FOSP01100 380 aaPredicted RBP14.98□□□□□ -0.01
MRPL55-228ENST00000476267 MMP1P03956 469 aa14.98□□□□□ -0.01
MRPL55-228ENST00000476267 CDC27P30260 824 aa14.98□□□□□ -0.01
MRPL55-228ENST00000476267 NAPAP54920 295 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms