RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 DNAJB3Q8WWF6 145 aa12.42□□□□□ -0.42
CDRT1-205ENST00000475944 TNPO1Q92973 898 aaKnown RBP12.42□□□□□ -0.42
CDRT1-205ENST00000475944 CLDND1Q9NY35 253 aa12.42□□□□□ -0.42
CDRT1-205ENST00000475944 PRKAG3Q9UGI9 489 aa12.42□□□□□ -0.42
CDRT1-205ENST00000475944 SLC12A7Q9Y666 1083 aa12.42□□□□□ -0.42
CDRT1-205ENST00000475944 CDY2AQ9Y6F7 541 aa12.42□□□□□ -0.42
CDRT1-205ENST00000475944 KAT6AQ92794 2004 aa12.42□□□□□ -0.42
CDRT1-205ENST00000475944 M0QZ92 97 aa12.41□□□□□ -0.42
CDRT1-205ENST00000475944 ENPP3O14638 875 aa12.41□□□□□ -0.42
CDRT1-205ENST00000475944 HOXD11P31277 338 aaPredicted RBP12.41□□□□□ -0.42
CDRT1-205ENST00000475944 IGBP1P78318 339 aa12.41□□□□□ -0.42
CDRT1-205ENST00000475944 MRPS6P82932 125 aaKnown RBP12.41□□□□□ -0.42
CDRT1-205ENST00000475944 BTG3Q14201 252 aaPredicted RBP12.41□□□□□ -0.42
CDRT1-205ENST00000475944 UBE2SQ16763 222 aa12.41□□□□□ -0.42
CDRT1-205ENST00000475944 IER5Q5VY09 327 aa12.41□□□□□ -0.42
CDRT1-205ENST00000475944 CLP1Q92989 425 aaKnown RBP12.41□□□□□ -0.42
CDRT1-205ENST00000475944 AZI2Q9H6S1 392 aa12.41□□□□□ -0.42
CDRT1-205ENST00000475944 RC3H2Q9HBD1 1191 aaKnown RBP12.41□□□□□ -0.42
CDRT1-205ENST00000475944 JPH1Q9HDC5 661 aaPredicted RBP12.41□□□□□ -0.42
CDRT1-205ENST00000475944 JADE2Q9NQC1 790 aa12.41□□□□□ -0.42
CDRT1-205ENST00000475944 BRWD1Q9NSI6 2320 aa12.41□□□□□ -0.42
CDRT1-205ENST00000475944 PKD2L1Q9P0L9 805 aa12.41□□□□□ -0.42
CDRT1-205ENST00000475944 PCDHA6Q9UN73 950 aa12.41□□□□□ -0.42
CDRT1-205ENST00000475944 PCDHA8Q9Y5H6 950 aa12.41□□□□□ -0.42
CDRT1-205ENST00000475944 SQORQ9Y6N5 450 aa12.41□□□□□ -0.42
CDRT1-205ENST00000475944 SLC27A2O14975 620 aa12.4□□□□□ -0.42
CDRT1-205ENST00000475944 LINC00271P0C7V0 271 aa12.4□□□□□ -0.42
CDRT1-205ENST00000475944 INSRRP14616 1297 aa12.4□□□□□ -0.42
CDRT1-205ENST00000475944 MARCH8Q5T0T0 291 aa12.4□□□□□ -0.42
CDRT1-205ENST00000475944 SYNE3Q6ZMZ3 975 aa12.4□□□□□ -0.42
CDRT1-205ENST00000475944 TMTC3Q6ZXV5 915 aa12.4□□□□□ -0.42
CDRT1-205ENST00000475944 HEATR3Q7Z4Q2 680 aa12.4□□□□□ -0.42
CDRT1-205ENST00000475944 TEX2Q8IWB9 1127 aa12.4□□□□□ -0.42
CDRT1-205ENST00000475944 CCDC82Q8N4S0 544 aa12.4□□□□□ -0.42
CDRT1-205ENST00000475944 FANCBQ8NB91 859 aa12.4□□□□□ -0.42
CDRT1-205ENST00000475944 ZNF689Q96CS4 500 aaPredicted RBP12.4□□□□□ -0.42
CDRT1-205ENST00000475944 PLVAPQ9BX97 442 aa12.4□□□□□ -0.42
CDRT1-205ENST00000475944 FTHL17Q9BXU8 183 aa12.4□□□□□ -0.42
CDRT1-205ENST00000475944 SLC9A2Q9UBY0 812 aa12.4□□□□□ -0.42
CDRT1-205ENST00000475944 TRPC6Q9Y210 931 aa12.4□□□□□ -0.42
CDRT1-205ENST00000475944 hCG_1642624A0A1W2PR95 340 aa12.39□□□□□ -0.43
CDRT1-205ENST00000475944 GRM6O15303 877 aa12.39□□□□□ -0.43
CDRT1-205ENST00000475944 DCXO43602 365 aa12.39□□□□□ -0.43
CDRT1-205ENST00000475944 DGKIO75912 1065 aa12.39□□□□□ -0.43
CDRT1-205ENST00000475944 MMP1P03956 469 aa12.39□□□□□ -0.43
CDRT1-205ENST00000475944 CD52P31358 61 aa12.39□□□□□ -0.43
CDRT1-205ENST00000475944 ZP2Q05996 745 aa12.39□□□□□ -0.43
CDRT1-205ENST00000475944 CSPP1Q1MSJ5 1256 aa12.39□□□□□ -0.43
CDRT1-205ENST00000475944 CTC1Q2NKJ3 1217 aa12.39□□□□□ -0.43
CDRT1-205ENST00000475944 MICU3Q86XE3 530 aa12.39□□□□□ -0.43
CDRT1-205ENST00000475944 RAB11FIP4Q86YS3 637 aa12.39□□□□□ -0.43
CDRT1-205ENST00000475944 NPAS4Q8IUM7 802 aa12.39□□□□□ -0.43
CDRT1-205ENST00000475944 ADHFE1Q8IWW8 467 aa12.39□□□□□ -0.43
CDRT1-205ENST00000475944 P2RX5Q93086 422 aa12.39□□□□□ -0.43
CDRT1-205ENST00000475944 PPP2R3CQ969Q6 453 aa12.39□□□□□ -0.43
CDRT1-205ENST00000475944 POP1Q99575 1024 aaKnown RBP12.39□□□□□ -0.43
CDRT1-205ENST00000475944 MXRA8Q9BRK3 442 aa12.39□□□□□ -0.43
CDRT1-205ENST00000475944 SDF4Q9BRK5 362 aa12.39□□□□□ -0.43
CDRT1-205ENST00000475944 LSG1Q9H089 658 aaKnown RBP12.39□□□□□ -0.43
CDRT1-205ENST00000475944 FAM49AQ9H0Q0 323 aaPredicted RBP12.39□□□□□ -0.43
CDRT1-205ENST00000475944 KCNH7Q9NS40 1196 aa12.39□□□□□ -0.43
CDRT1-205ENST00000475944 TRPV2Q9Y5S1 764 aa12.39□□□□□ -0.43
CDRT1-205ENST00000475944 NFASCO94856 1347 aa12.38□□□□□ -0.43
CDRT1-205ENST00000475944 FOSP01100 380 aaPredicted RBP12.38□□□□□ -0.43
CDRT1-205ENST00000475944 STAG3L1P0CL83 205 aa12.38□□□□□ -0.43
CDRT1-205ENST00000475944 NAPAP54920 295 aa12.38□□□□□ -0.43
CDRT1-205ENST00000475944 HYAL1Q12794 435 aa12.38□□□□□ -0.43
CDRT1-205ENST00000475944 NAALADL2Q58DX5 795 aa12.38□□□□□ -0.43
CDRT1-205ENST00000475944 CREB3L3Q68CJ9 461 aa12.38□□□□□ -0.43
CDRT1-205ENST00000475944 PPP1R18Q6NYC8 613 aa12.38□□□□□ -0.43
CDRT1-205ENST00000475944 PLPPR4Q7Z2D5 763 aa12.38□□□□□ -0.43
CDRT1-205ENST00000475944 SGMS1Q86VZ5 419 aa12.38□□□□□ -0.43
CDRT1-205ENST00000475944 CMTR2Q8IYT2 770 aaKnown RBP12.38□□□□□ -0.43
CDRT1-205ENST00000475944 UIMC1Q96RL1 719 aa12.38□□□□□ -0.43
CDRT1-205ENST00000475944 PCYT2Q99447 389 aa12.38□□□□□ -0.43
CDRT1-205ENST00000475944 ESYT1Q9BSJ8 1104 aa12.38□□□□□ -0.43
CDRT1-205ENST00000475944 LRRC2Q9BYS8 371 aa12.38□□□□□ -0.43
CDRT1-205ENST00000475944 UPF3BQ9BZI7 483 aaKnown RBP12.38□□□□□ -0.43
CDRT1-205ENST00000475944 AGO3Q9H9G7 860 aaKnown RBP12.38□□□□□ -0.43
CDRT1-205ENST00000475944 RBM28Q9NW13 759 aaKnown RBP12.38□□□□□ -0.43
CDRT1-205ENST00000475944 PCDHA2Q9Y5H9 948 aa12.38□□□□□ -0.43
CDRT1-205ENST00000475944 IGSF9BQ9UPX0 1349 aa12.37□□□□□ -0.43
CDRT1-205ENST00000475944 TTC3P53804 2025 aa12.37□□□□□ -0.43
CDRT1-205ENST00000475944 SMIM35A0A1B0GVV1 85 aa12.37□□□□□ -0.43
CDRT1-205ENST00000475944 POTEB3A0JP26 581 aa12.37□□□□□ -0.43
CDRT1-205ENST00000475944 C19orf67A6NJJ6 358 aa12.37□□□□□ -0.43
CDRT1-205ENST00000475944 hCG_1984214I3L0E3 225 aa12.37□□□□□ -0.43
CDRT1-205ENST00000475944 LTBRP36941 435 aa12.37□□□□□ -0.43
CDRT1-205ENST00000475944 SLC26A2P50443 739 aa12.37□□□□□ -0.43
CDRT1-205ENST00000475944 STAT5BP51692 787 aa12.37□□□□□ -0.43
CDRT1-205ENST00000475944 ACTR2P61160 394 aa12.37□□□□□ -0.43
CDRT1-205ENST00000475944 PAK2Q13177 524 aa12.37□□□□□ -0.43
CDRT1-205ENST00000475944 COL9A3Q14050 684 aaPredicted RBP12.37□□□□□ -0.43
CDRT1-205ENST00000475944 PLCB4Q15147 1175 aa12.37□□□□□ -0.43
CDRT1-205ENST00000475944 NECTIN1Q15223 517 aa12.37□□□□□ -0.43
CDRT1-205ENST00000475944 SMAD2Q15796 467 aaKnown RBP12.37□□□□□ -0.43
CDRT1-205ENST00000475944 RNF20Q5VTR2 975 aa12.37□□□□□ -0.43
CDRT1-205ENST00000475944 WWC2Q6AWC2 1192 aa12.37□□□□□ -0.43
CDRT1-205ENST00000475944 APOA5Q6Q788 366 aa12.37□□□□□ -0.43
CDRT1-205ENST00000475944 POTEBQ6S5H4 581 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms