RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 ADAM9Q13443 819 aa16.99■□□□□ 0.31
RPUSD3-215ENST00000475470 PRKG1Q13976 671 aa16.99■□□□□ 0.31
RPUSD3-215ENST00000475470 FIGNQ5HY92 759 aa16.99■□□□□ 0.31
RPUSD3-215ENST00000475470 JADE2Q9NQC1 790 aa16.99■□□□□ 0.31
RPUSD3-215ENST00000475470 RNF146Q9NTX7 359 aa16.99■□□□□ 0.31
RPUSD3-215ENST00000475470 TMOD4Q9NZQ9 345 aa16.99■□□□□ 0.31
RPUSD3-215ENST00000475470 DICER1Q9UPY3 1922 aaKnown RBP16.99■□□□□ 0.31
RPUSD3-215ENST00000475470 ZBTB39O15060 712 aa16.98■□□□□ 0.31
RPUSD3-215ENST00000475470 FAM13AO94988 1023 aa16.98■□□□□ 0.31
RPUSD3-215ENST00000475470 MYCLP12524 364 aaPredicted RBP16.98■□□□□ 0.31
RPUSD3-215ENST00000475470 MTMR1Q13613 665 aa16.98■□□□□ 0.31
RPUSD3-215ENST00000475470 PGM5Q15124 567 aa16.98■□□□□ 0.31
RPUSD3-215ENST00000475470 KNOP1Q1ED39 458 aaKnown RBP16.98■□□□□ 0.31
RPUSD3-215ENST00000475470 EDRF1Q3B7T1 1238 aa16.98■□□□□ 0.31
RPUSD3-215ENST00000475470 GLIPR1L2Q4G1C9 344 aa16.98■□□□□ 0.31
RPUSD3-215ENST00000475470 C1orf186Q6ZWK4 172 aa16.98■□□□□ 0.31
RPUSD3-215ENST00000475470 EPM2AIP1Q7L775 607 aaPredicted RBP16.98■□□□□ 0.31
RPUSD3-215ENST00000475470 MIER3Q7Z3K6 550 aa16.98■□□□□ 0.31
RPUSD3-215ENST00000475470 NEK9Q8TD19 979 aa16.98■□□□□ 0.31
RPUSD3-215ENST00000475470 RMDN3Q96TC7 470 aa16.98■□□□□ 0.31
RPUSD3-215ENST00000475470 LXNQ9BS40 222 aa16.98■□□□□ 0.31
RPUSD3-215ENST00000475470 AGO4Q9HCK5 861 aaKnown RBP16.98■□□□□ 0.31
RPUSD3-215ENST00000475470 POLD4Q9HCU8 107 aa16.98■□□□□ 0.31
RPUSD3-215ENST00000475470 FRMPD4Q14CM0 1322 aa16.98■□□□□ 0.31
RPUSD3-215ENST00000475470 A0A1W2PQJ5 194 aa16.98■□□□□ 0.31
RPUSD3-215ENST00000475470 CETN3O15182 167 aa16.98■□□□□ 0.31
RPUSD3-215ENST00000475470 MYBP10242 640 aa16.98■□□□□ 0.31
RPUSD3-215ENST00000475470 CASQ1P31415 396 aa16.98■□□□□ 0.31
RPUSD3-215ENST00000475470 DSG3P32926 999 aa16.98■□□□□ 0.31
RPUSD3-215ENST00000475470 COG2Q14746 738 aa16.98■□□□□ 0.31
RPUSD3-215ENST00000475470 ARHGEF16Q5VV41 709 aa16.98■□□□□ 0.31
RPUSD3-215ENST00000475470 BANK1Q8NDB2 785 aa16.98■□□□□ 0.31
RPUSD3-215ENST00000475470 ACRBPQ8NEB7 543 aa16.98■□□□□ 0.31
RPUSD3-215ENST00000475470 L2HGDHQ9H9P8 463 aa16.98■□□□□ 0.31
RPUSD3-215ENST00000475470 WRAP73Q9P2S5 460 aaPredicted RBP16.98■□□□□ 0.31
RPUSD3-215ENST00000475470 RIPK3Q9Y572 518 aa16.98■□□□□ 0.31
RPUSD3-215ENST00000475470 RBBP6Q7Z6E9 1792 aaKnown RBP16.97■□□□□ 0.31
RPUSD3-215ENST00000475470 SFI1A8K8P3 1242 aa16.97■□□□□ 0.31
RPUSD3-215ENST00000475470 DDNO94850 711 aaPredicted RBP16.97■□□□□ 0.31
RPUSD3-215ENST00000475470 PRPF6O94906 941 aaKnown RBP16.97■□□□□ 0.31
RPUSD3-215ENST00000475470 GCNT3O95395 438 aa16.97■□□□□ 0.31
RPUSD3-215ENST00000475470 NOL9Q5SY16 702 aaKnown RBP16.97■□□□□ 0.31
RPUSD3-215ENST00000475470 SNRNP48Q6IEG0 339 aaKnown RBP16.97■□□□□ 0.31
RPUSD3-215ENST00000475470 MYCT1Q8N699 235 aa16.97■□□□□ 0.31
RPUSD3-215ENST00000475470 MMRN2Q9H8L6 949 aa16.97■□□□□ 0.31
RPUSD3-215ENST00000475470 PXMP2Q9NR77 195 aa16.97■□□□□ 0.31
RPUSD3-215ENST00000475470 SIK3Q9Y2K2 1263 aa16.97■□□□□ 0.31
RPUSD3-215ENST00000475470 SLU7O95391 586 aaKnown RBP16.97■□□□□ 0.31
RPUSD3-215ENST00000475470 OAZ1P54368 228 aa16.97■□□□□ 0.31
RPUSD3-215ENST00000475470 WDR24Q96S15 920 aa16.97■□□□□ 0.31
RPUSD3-215ENST00000475470 FHDC1Q9C0D6 1143 aaPredicted RBP16.97■□□□□ 0.31
RPUSD3-215ENST00000475470 OLFML3Q9NRN5 406 aa16.97■□□□□ 0.31
RPUSD3-215ENST00000475470 FAM207AQ9NSI2 230 aaPredicted RBP16.97■□□□□ 0.31
RPUSD3-215ENST00000475470 TRAF3IP3Q9Y228 551 aa16.97■□□□□ 0.31
RPUSD3-215ENST00000475470 SAMM50Q9Y512 469 aa16.97■□□□□ 0.31
RPUSD3-215ENST00000475470 EPN1Q9Y6I3 576 aaPredicted RBP16.97■□□□□ 0.31
RPUSD3-215ENST00000475470 PARP14Q460N5 1801 aa16.97■□□□□ 0.31
RPUSD3-215ENST00000475470 UTRNP46939 3433 aa16.96■□□□□ 0.31
RPUSD3-215ENST00000475470 DHX15O43143 795 aaKnown RBP16.96■□□□□ 0.31
RPUSD3-215ENST00000475470 CALUO43852 315 aaPredicted RBP16.96■□□□□ 0.31
RPUSD3-215ENST00000475470 URI1O94763 535 aaPredicted RBP16.96■□□□□ 0.31
RPUSD3-215ENST00000475470 NDUFA10O95299 355 aa16.96■□□□□ 0.31
RPUSD3-215ENST00000475470 NR2F2P24468 414 aa16.96■□□□□ 0.31
RPUSD3-215ENST00000475470 BAATQ14032 418 aaPredicted RBP16.96■□□□□ 0.31
RPUSD3-215ENST00000475470 ARHGAP29Q52LW3 1261 aa16.96■□□□□ 0.31
RPUSD3-215ENST00000475470 WDR59Q6PJI9 974 aa16.96■□□□□ 0.31
RPUSD3-215ENST00000475470 PDCD2LQ9BRP1 358 aa16.96■□□□□ 0.31
RPUSD3-215ENST00000475470 KCND2Q9NZV8 630 aa16.96■□□□□ 0.31
RPUSD3-215ENST00000475470 ZNF215Q9UL58 517 aaPredicted RBP16.96■□□□□ 0.31
RPUSD3-215ENST00000475470 SSC5DA1L4H1 1573 aa16.96■□□□□ 0.31
RPUSD3-215ENST00000475470 KIF5CO60282 957 aa16.96■□□□□ 0.3
RPUSD3-215ENST00000475470 P4HBP07237 508 aaKnown RBP16.96■□□□□ 0.3
RPUSD3-215ENST00000475470 MARSP56192 900 aaKnown RBP16.96■□□□□ 0.3
RPUSD3-215ENST00000475470 ITGB3BPQ13352 177 aaPredicted RBP16.96■□□□□ 0.3
RPUSD3-215ENST00000475470 MEA1Q16626 185 aa16.96■□□□□ 0.3
RPUSD3-215ENST00000475470 CATSPERGQ6ZRH7 1159 aa16.96■□□□□ 0.3
RPUSD3-215ENST00000475470 ZC3H3Q8IXZ2 948 aaKnown RBP16.96■□□□□ 0.3
RPUSD3-215ENST00000475470 REPS2Q8NFH8 660 aa16.96■□□□□ 0.3
RPUSD3-215ENST00000475470 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.96■□□□□ 0.3
RPUSD3-215ENST00000475470 PARVGQ9HBI0 331 aa16.96■□□□□ 0.3
RPUSD3-215ENST00000475470 TBC1D22BQ9NU19 505 aa16.96■□□□□ 0.3
RPUSD3-215ENST00000475470 ADAMTS5Q9UNA0 930 aa16.96■□□□□ 0.3
RPUSD3-215ENST00000475470 AFG3L2Q9Y4W6 797 aa16.96■□□□□ 0.3
RPUSD3-215ENST00000475470 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.96■□□□□ 0.3
RPUSD3-215ENST00000475470 PHIPQ8WWQ0 1821 aa16.96■□□□□ 0.3
RPUSD3-215ENST00000475470 A0A0U1RQJ8 604 aa16.95■□□□□ 0.3
RPUSD3-215ENST00000475470 ARHGEF35A5YM69 484 aa16.95■□□□□ 0.3
RPUSD3-215ENST00000475470 PDXKO00764 312 aa16.95■□□□□ 0.3
RPUSD3-215ENST00000475470 FANCGO15287 622 aa16.95■□□□□ 0.3
RPUSD3-215ENST00000475470 HOXD13P35453 343 aa16.95■□□□□ 0.3
RPUSD3-215ENST00000475470 BMT2Q1RMZ1 405 aa16.95■□□□□ 0.3
RPUSD3-215ENST00000475470 ATRIPQ8WXE1 791 aa16.95■□□□□ 0.3
RPUSD3-215ENST00000475470 ERO1AQ96HE7 468 aa16.95■□□□□ 0.3
RPUSD3-215ENST00000475470 PURBQ96QR8 312 aaKnown RBP16.95■□□□□ 0.3
RPUSD3-215ENST00000475470 ARID3AQ99856 593 aa16.95■□□□□ 0.3
RPUSD3-215ENST00000475470 BCAS3Q9H6U6 928 aa16.95■□□□□ 0.3
RPUSD3-215ENST00000475470 ZSWIM4Q9H7M6 989 aa16.95■□□□□ 0.3
RPUSD3-215ENST00000475470 POLR2AP24928 1970 aaKnown RBP16.95■□□□□ 0.3
RPUSD3-215ENST00000475470 SBF1O95248 1867 aa16.95■□□□□ 0.3
RPUSD3-215ENST00000475470 USP2O75604 605 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms