RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 TCERG1LQ5VWI1 586 aa7.93□□□□□ -1.14
TM9SF3-204ENST00000475401 CD276Q5ZPR3 534 aa7.93□□□□□ -1.14
TM9SF3-204ENST00000475401 PASD1Q8IV76 773 aa7.93□□□□□ -1.14
TM9SF3-204ENST00000475401 WDR48Q8TAF3 677 aa7.93□□□□□ -1.14
TM9SF3-204ENST00000475401 IRF2BPLQ9H1B7 796 aa7.93□□□□□ -1.14
TM9SF3-204ENST00000475401 SPC25Q9HBM1 224 aa7.93□□□□□ -1.14
TM9SF3-204ENST00000475401 ACSS2Q9NR19 701 aa7.93□□□□□ -1.14
TM9SF3-204ENST00000475401 B3GALT1Q9Y5Z6 326 aa7.93□□□□□ -1.14
TM9SF3-204ENST00000475401 SBNO2Q9Y2G9 1366 aa7.93□□□□□ -1.14
TM9SF3-204ENST00000475401 FOXP2O15409 715 aa7.92□□□□□ -1.14
TM9SF3-204ENST00000475401 FBXO21O94952 628 aa7.92□□□□□ -1.14
TM9SF3-204ENST00000475401 C4BPAP04003 597 aaKnown RBP7.92□□□□□ -1.14
TM9SF3-204ENST00000475401 STAT3P40763 770 aa7.92□□□□□ -1.14
TM9SF3-204ENST00000475401 SMAD4Q13485 552 aaKnown RBP7.92□□□□□ -1.14
TM9SF3-204ENST00000475401 STK32CQ86UX6 486 aa7.92□□□□□ -1.14
TM9SF3-204ENST00000475401 C11orf74Q86VG3 221 aa7.92□□□□□ -1.14
TM9SF3-204ENST00000475401 LINC00482Q8N8I6 264 aa7.92□□□□□ -1.14
TM9SF3-204ENST00000475401 FNIP1Q8TF40 1166 aa7.92□□□□□ -1.14
TM9SF3-204ENST00000475401 USP7Q93009 1102 aa7.92□□□□□ -1.14
TM9SF3-204ENST00000475401 MTFR1LQ9H019 292 aa7.92□□□□□ -1.14
TM9SF3-204ENST00000475401 DLL4Q9NR61 685 aa7.92□□□□□ -1.14
TM9SF3-204ENST00000475401 CYP17A1P05093 508 aa7.91□□□□□ -1.14
TM9SF3-204ENST00000475401 IL2P60568 153 aa7.91□□□□□ -1.14
TM9SF3-204ENST00000475401 CAP1Q01518 475 aa7.91□□□□□ -1.14
TM9SF3-204ENST00000475401 PFKPQ01813 784 aa7.91□□□□□ -1.14
TM9SF3-204ENST00000475401 CC2D1AQ6P1N0 951 aaPredicted RBP7.91□□□□□ -1.14
TM9SF3-204ENST00000475401 FILIP1Q7Z7B0 1213 aa7.91□□□□□ -1.14
TM9SF3-204ENST00000475401 THNSL2Q86YJ6 484 aa7.91□□□□□ -1.14
TM9SF3-204ENST00000475401 KIAA1958Q8N8K9 716 aa7.91□□□□□ -1.14
TM9SF3-204ENST00000475401 HIPK4Q8NE63 616 aa7.91□□□□□ -1.14
TM9SF3-204ENST00000475401 IGDCC4Q8TDY8 1250 aa7.91□□□□□ -1.14
TM9SF3-204ENST00000475401 DLG3Q92796 817 aa7.91□□□□□ -1.14
TM9SF3-204ENST00000475401 DACT3Q96B18 629 aaPredicted RBP7.91□□□□□ -1.14
TM9SF3-204ENST00000475401 SCYL1Q96KG9 808 aa7.91□□□□□ -1.14
TM9SF3-204ENST00000475401 NOX5Q96PH1 765 aa7.91□□□□□ -1.14
TM9SF3-204ENST00000475401 EPB41L4AQ9HCS5 686 aaPredicted RBP7.91□□□□□ -1.14
TM9SF3-204ENST00000475401 NTMQ9P121 344 aa7.91□□□□□ -1.14
TM9SF3-204ENST00000475401 ARHGAP20Q9P2F6 1191 aa7.91□□□□□ -1.14
TM9SF3-204ENST00000475401 CROTQ9UKG9 612 aa7.91□□□□□ -1.14
TM9SF3-204ENST00000475401 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.9□□□□□ -1.14
TM9SF3-204ENST00000475401 ZNF839A8K0R7 811 aa7.9□□□□□ -1.14
TM9SF3-204ENST00000475401 ZBTB48P10074 688 aaPredicted RBP7.9□□□□□ -1.14
TM9SF3-204ENST00000475401 YBX3P16989 372 aaKnown RBP eCLIP7.9□□□□□ -1.14
TM9SF3-204ENST00000475401 KPNA1P52294 538 aaPredicted RBP7.9□□□□□ -1.14
TM9SF3-204ENST00000475401 HTRA3P83110 453 aa7.9□□□□□ -1.14
TM9SF3-204ENST00000475401 SKIDA1Q1XH10 827 aa7.9□□□□□ -1.14
TM9SF3-204ENST00000475401 LRRC56Q8IYG6 542 aaPredicted RBP7.9□□□□□ -1.14
TM9SF3-204ENST00000475401 NXPE1Q8N323 547 aa7.9□□□□□ -1.14
TM9SF3-204ENST00000475401 E2F7Q96AV8 911 aa7.9□□□□□ -1.14
TM9SF3-204ENST00000475401 THG1LQ9NWX6 298 aaKnown RBP7.9□□□□□ -1.14
TM9SF3-204ENST00000475401 FAM83GA6ND36 823 aa7.89□□□□□ -1.15
TM9SF3-204ENST00000475401 ZNF891A8MT65 544 aaPredicted RBP7.89□□□□□ -1.15
TM9SF3-204ENST00000475401 PLA2G1BP04054 148 aaKnown RBP7.89□□□□□ -1.15
TM9SF3-204ENST00000475401 MMEP08473 750 aa7.89□□□□□ -1.15
TM9SF3-204ENST00000475401 ATP2A2P16615 1042 aaKnown RBP7.89□□□□□ -1.15
TM9SF3-204ENST00000475401 PTGS1P23219 599 aa7.89□□□□□ -1.15
TM9SF3-204ENST00000475401 AOAHP28039 575 aa7.89□□□□□ -1.15
TM9SF3-204ENST00000475401 SDHAP31040 664 aa7.89□□□□□ -1.15
TM9SF3-204ENST00000475401 DHCR24Q15392 516 aa7.89□□□□□ -1.15
TM9SF3-204ENST00000475401 SEC23AQ15436 765 aa7.89□□□□□ -1.15
TM9SF3-204ENST00000475401 PRAMEF18Q5VWM3 479 aa7.89□□□□□ -1.15
TM9SF3-204ENST00000475401 LIPIQ6XZB0 460 aa7.89□□□□□ -1.15
TM9SF3-204ENST00000475401 KRT26Q7Z3Y9 468 aa7.89□□□□□ -1.15
TM9SF3-204ENST00000475401 RNF180Q86T96 592 aa7.89□□□□□ -1.15
TM9SF3-204ENST00000475401 SAPCD2Q86UD0 394 aa7.89□□□□□ -1.15
TM9SF3-204ENST00000475401 NME9Q86XW9 330 aa7.89□□□□□ -1.15
TM9SF3-204ENST00000475401 UBR7Q8N806 425 aa7.89□□□□□ -1.15
TM9SF3-204ENST00000475401 DTX3Q8N9I9 347 aa7.89□□□□□ -1.15
TM9SF3-204ENST00000475401 ZSWIM3Q96MP5 696 aa7.89□□□□□ -1.15
TM9SF3-204ENST00000475401 GBP4Q96PP9 640 aa7.89□□□□□ -1.15
TM9SF3-204ENST00000475401 TTC1Q99614 292 aa7.89□□□□□ -1.15
TM9SF3-204ENST00000475401 SLC39A2Q9NP94 309 aa7.89□□□□□ -1.15
TM9SF3-204ENST00000475401 OXSMQ9NWU1 459 aa7.89□□□□□ -1.15
TM9SF3-204ENST00000475401 RBPJLQ9UBG7 517 aa7.89□□□□□ -1.15
TM9SF3-204ENST00000475401 THBS2P35442 1172 aa7.88□□□□□ -1.15
TM9SF3-204ENST00000475401 FNTBP49356 437 aa7.88□□□□□ -1.15
TM9SF3-204ENST00000475401 DSG1Q02413 1049 aa7.88□□□□□ -1.15
TM9SF3-204ENST00000475401 ADAM9Q13443 819 aa7.88□□□□□ -1.15
TM9SF3-204ENST00000475401 SEPT7Q16181 437 aaKnown RBP7.88□□□□□ -1.15
TM9SF3-204ENST00000475401 DPP8Q6V1X1 898 aaPredicted RBP7.88□□□□□ -1.15
TM9SF3-204ENST00000475401 ZZZ3Q8IYH5 903 aa7.88□□□□□ -1.15
TM9SF3-204ENST00000475401 FAM177A1Q8N128 213 aaPredicted RBP7.88□□□□□ -1.15
TM9SF3-204ENST00000475401 ERCC4Q92889 916 aaPredicted RBP7.88□□□□□ -1.15
TM9SF3-204ENST00000475401 GPR101Q96P66 508 aaPredicted RBP7.88□□□□□ -1.15
TM9SF3-204ENST00000475401 SYT3Q9BQG1 590 aa7.88□□□□□ -1.15
TM9SF3-204ENST00000475401 INCENPQ9NQS7 918 aa7.88□□□□□ -1.15
TM9SF3-204ENST00000475401 TOMM22Q9NS69 142 aa7.88□□□□□ -1.15
TM9SF3-204ENST00000475401 ASB1Q9Y576 335 aa7.88□□□□□ -1.15
TM9SF3-204ENST00000475401 SPO11Q9Y5K1 396 aa7.88□□□□□ -1.15
TM9SF3-204ENST00000475401 VIL1P09327 827 aaKnown RBP7.87□□□□□ -1.15
TM9SF3-204ENST00000475401 GLRBP48167 497 aa7.87□□□□□ -1.15
TM9SF3-204ENST00000475401 STRN3Q13033 797 aa7.87□□□□□ -1.15
TM9SF3-204ENST00000475401 SKOR2Q2VWA4 1001 aaPredicted RBP7.87□□□□□ -1.15
TM9SF3-204ENST00000475401 FSTL4Q6MZW2 842 aa7.87□□□□□ -1.15
TM9SF3-204ENST00000475401 PROSER1Q86XN7 944 aa7.87□□□□□ -1.15
TM9SF3-204ENST00000475401 EFHBQ8N7U6 833 aa7.87□□□□□ -1.15
TM9SF3-204ENST00000475401 LINC01356Q8N9X3 169 aa7.87□□□□□ -1.15
TM9SF3-204ENST00000475401 SMC1BQ8NDV3 1235 aa7.87□□□□□ -1.15
TM9SF3-204ENST00000475401 CALML6Q8TD86 181 aa7.87□□□□□ -1.15
TM9SF3-204ENST00000475401 CHTF18Q8WVB6 975 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms