RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 ATG2AQ2TAZ0 1938 aa14.51□□□□□ -0.09
SKA3-206ENST00000475251 PIK3CDO00329 1044 aa14.5□□□□□ -0.09
SKA3-206ENST00000475251 EYA4O95677 639 aa14.5□□□□□ -0.09
SKA3-206ENST00000475251 STAG3L1P0CL83 205 aa14.5□□□□□ -0.09
SKA3-206ENST00000475251 WTAPQ15007 396 aa14.5□□□□□ -0.09
SKA3-206ENST00000475251 GRIK4Q16099 956 aa14.5□□□□□ -0.09
SKA3-206ENST00000475251 IER5Q5VY09 327 aa14.5□□□□□ -0.09
SKA3-206ENST00000475251 B4GALNT3Q6L9W6 998 aa14.5□□□□□ -0.09
SKA3-206ENST00000475251 CYB5R4Q7L1T6 521 aa14.5□□□□□ -0.09
SKA3-206ENST00000475251 CATIPQ7Z7H3 387 aa14.5□□□□□ -0.09
SKA3-206ENST00000475251 RALYLQ86SE5 291 aaKnown RBP14.5□□□□□ -0.09
SKA3-206ENST00000475251 SEPT1Q8WYJ6 367 aa14.5□□□□□ -0.09
SKA3-206ENST00000475251 GLG1Q92896 1179 aa14.5□□□□□ -0.09
SKA3-206ENST00000475251 GPRASP2Q96D09 838 aa14.5□□□□□ -0.09
SKA3-206ENST00000475251 SMARCAD1Q9H4L7 1026 aa14.5□□□□□ -0.09
SKA3-206ENST00000475251 ALG13Q9NP73 1137 aaKnown RBP14.5□□□□□ -0.09
SKA3-206ENST00000475251 SEC63Q9UGP8 760 aaKnown RBP14.5□□□□□ -0.09
SKA3-206ENST00000475251 MBLAC1A4D2B0 266 aaPredicted RBP14.49□□□□□ -0.09
SKA3-206ENST00000475251 RRN3P2A6NIE6 340 aa14.49□□□□□ -0.09
SKA3-206ENST00000475251 RBAK-RBAKDNI3L0D1 243 aa14.49□□□□□ -0.09
SKA3-206ENST00000475251 CYTH3O43739 400 aa14.49□□□□□ -0.09
SKA3-206ENST00000475251 MRPS6P82932 125 aaKnown RBP14.49□□□□□ -0.09
SKA3-206ENST00000475251 TROAPQ12815 778 aa14.49□□□□□ -0.09
SKA3-206ENST00000475251 COASYQ13057 564 aa14.49□□□□□ -0.09
SKA3-206ENST00000475251 RUFY4Q6ZNE9 571 aa14.49□□□□□ -0.09
SKA3-206ENST00000475251 TRIM67Q6ZTA4 783 aa14.49□□□□□ -0.09
SKA3-206ENST00000475251 NPAS4Q8IUM7 802 aa14.49□□□□□ -0.09
SKA3-206ENST00000475251 EFHBQ8N7U6 833 aa14.49□□□□□ -0.09
SKA3-206ENST00000475251 DNAJB3Q8WWF6 145 aa14.49□□□□□ -0.09
SKA3-206ENST00000475251 PBXIP1Q96AQ6 731 aa14.49□□□□□ -0.09
SKA3-206ENST00000475251 RRP36Q96EU6 259 aaKnown RBP14.49□□□□□ -0.09
SKA3-206ENST00000475251 MSLNLQ96KJ4 702 aa14.49□□□□□ -0.09
SKA3-206ENST00000475251 CDY2AQ9Y6F7 541 aa14.49□□□□□ -0.09
SKA3-206ENST00000475251 DOCK5Q9H7D0 1870 aa14.48□□□□□ -0.09
SKA3-206ENST00000475251 ZNF318Q5VUA4 2279 aa14.48□□□□□ -0.09
SKA3-206ENST00000475251 TTC3P53804 2025 aa14.48□□□□□ -0.09
SKA3-206ENST00000475251 TMEM221A6NGB7 291 aa14.48□□□□□ -0.09
SKA3-206ENST00000475251 M0R296 226 aa14.48□□□□□ -0.09
SKA3-206ENST00000475251 LINC01565O15544 149 aa14.48□□□□□ -0.09
SKA3-206ENST00000475251 CSPG5O95196 566 aa14.48□□□□□ -0.09
SKA3-206ENST00000475251 KIF5BP33176 963 aa14.48□□□□□ -0.09
SKA3-206ENST00000475251 GTF2F1P35269 517 aaKnown RBP eCLIP14.48□□□□□ -0.09
SKA3-206ENST00000475251 NUCB1Q02818 461 aa14.48□□□□□ -0.09
SKA3-206ENST00000475251 SLC35G1Q2M3R5 365 aa14.48□□□□□ -0.09
SKA3-206ENST00000475251 SMRP1Q8NCR6 262 aa14.48□□□□□ -0.09
SKA3-206ENST00000475251 NCOA7Q8NI08 942 aa14.48□□□□□ -0.09
SKA3-206ENST00000475251 CTCFLQ8NI51 663 aaPredicted RBP14.48□□□□□ -0.09
SKA3-206ENST00000475251 SUPT16HQ9Y5B9 1047 aaKnown RBP14.48□□□□□ -0.09
SKA3-206ENST00000475251 MRPL42Q9Y6G3 142 aaKnown RBP14.48□□□□□ -0.09
SKA3-206ENST00000475251 MAFGO15525 162 aa14.47□□□□□ -0.09
SKA3-206ENST00000475251 ITGB1P05556 798 aa14.47□□□□□ -0.09
SKA3-206ENST00000475251 MARK3P27448 753 aa14.47□□□□□ -0.09
SKA3-206ENST00000475251 SMARCA1P28370 1054 aa14.47□□□□□ -0.09
SKA3-206ENST00000475251 CAMK1Q14012 370 aa14.47□□□□□ -0.09
SKA3-206ENST00000475251 USP17L6PQ6QN14 398 aa14.47□□□□□ -0.09
SKA3-206ENST00000475251 KLHL23Q8NBE8 558 aa14.47□□□□□ -0.09
SKA3-206ENST00000475251 SPPL3Q8TCT6 385 aa14.47□□□□□ -0.09
SKA3-206ENST00000475251 MAP3K14Q99558 947 aa14.47□□□□□ -0.09
SKA3-206ENST00000475251 LZTS2Q9BRK4 669 aa14.47□□□□□ -0.09
SKA3-206ENST00000475251 SPZ1Q9BXG8 430 aa14.47□□□□□ -0.09
SKA3-206ENST00000475251 IRF2BPLQ9H1B7 796 aa14.47□□□□□ -0.09
SKA3-206ENST00000475251 AZI2Q9H6S1 392 aa14.47□□□□□ -0.09
SKA3-206ENST00000475251 AAASQ9NRG9 546 aa14.47□□□□□ -0.09
SKA3-206ENST00000475251 LRFN2Q9ULH4 789 aa14.47□□□□□ -0.09
SKA3-206ENST00000475251 LOC730098B7Z3J9 87 aa14.46□□□□□ -0.09
SKA3-206ENST00000475251 MEIS2O14770 477 aa14.46□□□□□ -0.09
SKA3-206ENST00000475251 ST18O60284 1047 aa14.46□□□□□ -0.09
SKA3-206ENST00000475251 SRGAP2BP0DMP2 458 aa14.46□□□□□ -0.09
SKA3-206ENST00000475251 SCG2P13521 617 aa14.46□□□□□ -0.09
SKA3-206ENST00000475251 KCNA2P16389 499 aa14.46□□□□□ -0.09
SKA3-206ENST00000475251 CD52P31358 61 aa14.46□□□□□ -0.09
SKA3-206ENST00000475251 NRIP1P48552 1158 aa14.46□□□□□ -0.09
SKA3-206ENST00000475251 GNAQP50148 359 aa14.46□□□□□ -0.09
SKA3-206ENST00000475251 IGBP1P78318 339 aa14.46□□□□□ -0.09
SKA3-206ENST00000475251 ZXDAP98168 799 aa14.46□□□□□ -0.09
SKA3-206ENST00000475251 UBE3AQ05086 875 aa14.46□□□□□ -0.09
SKA3-206ENST00000475251 PAK2Q13177 524 aa14.46□□□□□ -0.09
SKA3-206ENST00000475251 MTMR1Q13613 665 aa14.46□□□□□ -0.09
SKA3-206ENST00000475251 CBX2Q14781 532 aaPredicted RBP14.46□□□□□ -0.09
SKA3-206ENST00000475251 POF1BQ8WVV4 589 aa14.46□□□□□ -0.09
SKA3-206ENST00000475251 RUFY2Q8WXA3 655 aa14.46□□□□□ -0.09
SKA3-206ENST00000475251 PIBF1Q8WXW3 757 aa14.46□□□□□ -0.09
SKA3-206ENST00000475251 CDCA3Q99618 268 aaPredicted RBP14.46□□□□□ -0.09
SKA3-206ENST00000475251 PHF7Q9BWX1 381 aaPredicted RBP14.46□□□□□ -0.09
SKA3-206ENST00000475251 FAM49AQ9H0Q0 323 aaPredicted RBP14.46□□□□□ -0.09
SKA3-206ENST00000475251 CLEC1BQ9P126 229 aa14.46□□□□□ -0.09
SKA3-206ENST00000475251 TELO2Q9Y4R8 837 aa14.46□□□□□ -0.09
SKA3-206ENST00000475251 PCDHB12Q9Y5F1 795 aa14.46□□□□□ -0.09
SKA3-206ENST00000475251 TRPV2Q9Y5S1 764 aa14.46□□□□□ -0.09
SKA3-206ENST00000475251 WDFY4Q6ZS81 3184 aa14.45□□□□□ -0.1
SKA3-206ENST00000475251 MYO7AQ13402 2215 aa14.45□□□□□ -0.1
SKA3-206ENST00000475251 GSTTP1A0A1W2PQM5 241 aa14.45□□□□□ -0.1
SKA3-206ENST00000475251 DDAH1O94760 285 aa14.45□□□□□ -0.1
SKA3-206ENST00000475251 CYP21A2P08686 494 aa14.45□□□□□ -0.1
SKA3-206ENST00000475251 PRR29P0C7W0 189 aa14.45□□□□□ -0.1
SKA3-206ENST00000475251 SIGLEC14Q08ET2 396 aa14.45□□□□□ -0.1
SKA3-206ENST00000475251 ODR4Q5SWX8 454 aa14.45□□□□□ -0.1
SKA3-206ENST00000475251 MARCH8Q5T0T0 291 aa14.45□□□□□ -0.1
SKA3-206ENST00000475251 ADGRD2Q7Z7M1 963 aa14.45□□□□□ -0.1
SKA3-206ENST00000475251 CRIPAKQ8N1N5 446 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms