RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 GH2P01242 217 aa11.83□□□□□ -0.52
VAPB-204ENST00000475243 PEX19P40855 299 aa11.83□□□□□ -0.52
VAPB-204ENST00000475243 STX1BP61266 288 aa11.83□□□□□ -0.52
VAPB-204ENST00000475243 DALRD3Q5D0E6 543 aaKnown RBP11.83□□□□□ -0.52
VAPB-204ENST00000475243 LINC00301Q8NCQ3 95 aa11.83□□□□□ -0.52
VAPB-204ENST00000475243 OR6B3Q8NGW1 331 aa11.83□□□□□ -0.52
VAPB-204ENST00000475243 PAGE5Q96GU1 130 aa11.83□□□□□ -0.52
VAPB-204ENST00000475243 CPVLQ9H3G5 476 aa11.83□□□□□ -0.52
VAPB-204ENST00000475243 XAB2Q9HCS7 855 aaKnown RBP11.83□□□□□ -0.52
VAPB-204ENST00000475243 MED4Q9NPJ6 270 aa11.83□□□□□ -0.52
VAPB-204ENST00000475243 PIH1D3Q9NQM4 214 aaKnown RBP11.83□□□□□ -0.52
VAPB-204ENST00000475243 PGRMC1O00264 195 aaKnown RBP11.83□□□□□ -0.52
VAPB-204ENST00000475243 GSTA4O15217 222 aa11.83□□□□□ -0.52
VAPB-204ENST00000475243 LARGE1O95461 756 aa11.83□□□□□ -0.52
VAPB-204ENST00000475243 SPOPLQ6IQ16 392 aa11.83□□□□□ -0.52
VAPB-204ENST00000475243 CCDC197Q8NCU1 140 aa11.83□□□□□ -0.52
VAPB-204ENST00000475243 CDHR1Q96JP9 859 aa11.83□□□□□ -0.52
VAPB-204ENST00000475243 RWDD2AQ9UIY3 292 aa11.83□□□□□ -0.52
VAPB-204ENST00000475243 TMEM94Q12767 1356 aa11.83□□□□□ -0.52
VAPB-204ENST00000475243 SERPING1P05155 500 aa11.82□□□□□ -0.52
VAPB-204ENST00000475243 ANXA13P27216 316 aa11.82□□□□□ -0.52
VAPB-204ENST00000475243 ELF1P32519 619 aa11.82□□□□□ -0.52
VAPB-204ENST00000475243 PPP4R4Q6NUP7 873 aa11.82□□□□□ -0.52
VAPB-204ENST00000475243 BANK1Q8NDB2 785 aa11.82□□□□□ -0.52
VAPB-204ENST00000475243 PIGBQ92521 554 aa11.82□□□□□ -0.52
VAPB-204ENST00000475243 THOC1Q96FV9 657 aaKnown RBP11.82□□□□□ -0.52
VAPB-204ENST00000475243 ZNF668Q96K58 619 aaPredicted RBP11.82□□□□□ -0.52
VAPB-204ENST00000475243 TTC1Q99614 292 aa11.82□□□□□ -0.52
VAPB-204ENST00000475243 PNMA6FA0A0J9YX94 578 aa11.82□□□□□ -0.52
VAPB-204ENST00000475243 RASGRF1Q13972 1273 aa11.82□□□□□ -0.52
VAPB-204ENST00000475243 SAMD9Q5K651 1589 aa11.82□□□□□ -0.52
VAPB-204ENST00000475243 F5H423 210 aaPredicted RBP11.82□□□□□ -0.52
VAPB-204ENST00000475243 PLS3P13797 630 aa11.82□□□□□ -0.52
VAPB-204ENST00000475243 HLFQ16534 295 aa11.82□□□□□ -0.52
VAPB-204ENST00000475243 RNF207Q6ZRF8 634 aa11.82□□□□□ -0.52
VAPB-204ENST00000475243 ERBB4Q15303 1308 aa11.82□□□□□ -0.52
VAPB-204ENST00000475243 MT-ND3P03897 115 aa11.82□□□□□ -0.52
VAPB-204ENST00000475243 DHX9Q08211 1270 aaKnown RBP11.82□□□□□ -0.52
VAPB-204ENST00000475243 ZNF449Q6P9G9 518 aa11.82□□□□□ -0.52
VAPB-204ENST00000475243 BHMT2Q9H2M3 363 aa11.82□□□□□ -0.52
VAPB-204ENST00000475243 FAN1Q9Y2M0 1017 aa11.82□□□□□ -0.52
VAPB-204ENST00000475243 SRPRBQ9Y5M8 271 aaKnown RBP11.82□□□□□ -0.52
VAPB-204ENST00000475243 ARAP3Q8WWN8 1544 aa11.82□□□□□ -0.52
VAPB-204ENST00000475243 ZNF233A6NK53 670 aa11.82□□□□□ -0.52
VAPB-204ENST00000475243 FAM196BA6NMK8 535 aa11.82□□□□□ -0.52
VAPB-204ENST00000475243 MAP2K2P36507 400 aa11.82□□□□□ -0.52
VAPB-204ENST00000475243 IREB2P48200 963 aaKnown RBP11.82□□□□□ -0.52
VAPB-204ENST00000475243 NGRNQ9NPE2 291 aaKnown RBP11.82□□□□□ -0.52
VAPB-204ENST00000475243 ACSL3O95573 720 aa11.82□□□□□ -0.52
VAPB-204ENST00000475243 CASP1P29466 404 aa11.82□□□□□ -0.52
VAPB-204ENST00000475243 RASIP1Q5U651 963 aa11.82□□□□□ -0.52
VAPB-204ENST00000475243 RABGGTAQ92696 567 aa11.82□□□□□ -0.52
VAPB-204ENST00000475243 DHX36Q9H2U1 1008 aaKnown RBP11.82□□□□□ -0.52
VAPB-204ENST00000475243 CFLARO15519 480 aa11.82□□□□□ -0.52
VAPB-204ENST00000475243 CYP2D6P10635 497 aa11.82□□□□□ -0.52
VAPB-204ENST00000475243 ZFYVE16Q7Z3T8 1539 aa11.82□□□□□ -0.52
VAPB-204ENST00000475243 ARHGEF25Q86VW2 580 aa11.82□□□□□ -0.52
VAPB-204ENST00000475243 PEG3Q9GZU2 1588 aa11.82□□□□□ -0.52
VAPB-204ENST00000475243 HACD3Q9P035 362 aa11.82□□□□□ -0.52
VAPB-204ENST00000475243 CTNND1O60716 968 aaKnown RBP11.81□□□□□ -0.52
VAPB-204ENST00000475243 SLFN14P0C7P3 912 aa11.81□□□□□ -0.52
VAPB-204ENST00000475243 GCKP35557 465 aa11.81□□□□□ -0.52
VAPB-204ENST00000475243 PTPN12Q05209 780 aaKnown RBP11.81□□□□□ -0.52
VAPB-204ENST00000475243 ART3Q13508 389 aa11.81□□□□□ -0.52
VAPB-204ENST00000475243 SLC27A3Q5K4L6 730 aa11.81□□□□□ -0.52
VAPB-204ENST00000475243 ANGPTL8Q6UXH0 198 aa11.81□□□□□ -0.52
VAPB-204ENST00000475243 MOSPD1Q9UJG1 213 aa11.81□□□□□ -0.52
VAPB-204ENST00000475243 JRKLQ9Y4A0 524 aa11.81□□□□□ -0.52
VAPB-204ENST00000475243 CDC25BP30305 580 aa11.81□□□□□ -0.52
VAPB-204ENST00000475243 E2F5Q15329 346 aa11.81□□□□□ -0.52
VAPB-204ENST00000475243 SNCBQ16143 134 aa11.81□□□□□ -0.52
VAPB-204ENST00000475243 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.81□□□□□ -0.52
VAPB-204ENST00000475243 PPP6R3Q5H9R7 873 aaPredicted RBP11.81□□□□□ -0.52
VAPB-204ENST00000475243 THNSL1Q8IYQ7 743 aa11.81□□□□□ -0.52
VAPB-204ENST00000475243 PDCD6IPQ8WUM4 868 aaKnown RBP11.81□□□□□ -0.52
VAPB-204ENST00000475243 MAML1Q92585 1016 aa11.81□□□□□ -0.52
VAPB-204ENST00000475243 EXOC1LA0A1B0GW35 172 aa11.81□□□□□ -0.52
VAPB-204ENST00000475243 TRPA1O75762 1119 aa11.81□□□□□ -0.52
VAPB-204ENST00000475243 MMP10P09238 476 aa11.81□□□□□ -0.52
VAPB-204ENST00000475243 PSMA2P25787 234 aa11.81□□□□□ -0.52
VAPB-204ENST00000475243 TSPYL2Q9H2G4 693 aaPredicted RBP11.81□□□□□ -0.52
VAPB-204ENST00000475243 GDAQ9Y2T3 454 aa11.81□□□□□ -0.52
VAPB-204ENST00000475243 APOEP02649 317 aa11.81□□□□□ -0.52
VAPB-204ENST00000475243 SSTR3P32745 418 aaPredicted RBP11.81□□□□□ -0.52
VAPB-204ENST00000475243 BBS9Q3SYG4 887 aa11.81□□□□□ -0.52
VAPB-204ENST00000475243 NUDCD1Q96RS6 583 aa11.81□□□□□ -0.52
VAPB-204ENST00000475243 PPP1R9AQ9ULJ8 1098 aa11.81□□□□□ -0.52
VAPB-204ENST00000475243 PPFIA2O75334 1257 aa11.81□□□□□ -0.52
VAPB-204ENST00000475243 GPR108Q9NPR9 543 aa11.81□□□□□ -0.52
VAPB-204ENST00000475243 ORC6Q9Y5N6 252 aa11.81□□□□□ -0.52
VAPB-204ENST00000475243 ZNF500O60304 480 aaPredicted RBP11.81□□□□□ -0.52
VAPB-204ENST00000475243 ARHGEF6Q15052 776 aa11.81□□□□□ -0.52
VAPB-204ENST00000475243 FAM83BQ5T0W9 1011 aa11.81□□□□□ -0.52
VAPB-204ENST00000475243 METP08581 1390 aa11.8□□□□□ -0.52
VAPB-204ENST00000475243 PRPF3O43395 683 aaKnown RBP11.8□□□□□ -0.52
VAPB-204ENST00000475243 SLMAPQ14BN4 828 aa11.8□□□□□ -0.52
VAPB-204ENST00000475243 CIAPIN1Q6FI81 312 aa11.8□□□□□ -0.52
VAPB-204ENST00000475243 RSBN1LQ6PCB5 846 aaPredicted RBP11.8□□□□□ -0.52
VAPB-204ENST00000475243 SZRD1Q7Z422 152 aa11.8□□□□□ -0.52
VAPB-204ENST00000475243 ERICH1Q86X53 443 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms