RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 ASIC1P78348 528 aa23.33■■□□□ 1.32
SH3D21-202ENST00000474766 CDK17Q00537 523 aa23.33■■□□□ 1.32
SH3D21-202ENST00000474766 TTLL12Q14166 644 aaPredicted RBP23.33■■□□□ 1.32
SH3D21-202ENST00000474766 KCNV1Q6PIU1 500 aa23.33■■□□□ 1.32
SH3D21-202ENST00000474766 CSGALNACT2Q8N6G5 542 aa23.33■■□□□ 1.32
SH3D21-202ENST00000474766 JMJD4Q9H9V9 463 aa23.33■■□□□ 1.32
SH3D21-202ENST00000474766 MAGEC2Q9UBF1 373 aaPredicted RBP23.33■■□□□ 1.32
SH3D21-202ENST00000474766 COL2A1P02458 1487 aaPredicted RBP23.33■■□□□ 1.32
SH3D21-202ENST00000474766 SIPA1L1O43166 1804 aa23.33■■□□□ 1.32
SH3D21-202ENST00000474766 PNMA6FA0A0J9YX94 578 aa23.32■■□□□ 1.32
SH3D21-202ENST00000474766 SLURP2P0DP57 97 aa23.32■■□□□ 1.32
SH3D21-202ENST00000474766 TXKP42681 527 aa23.32■■□□□ 1.32
SH3D21-202ENST00000474766 MNAT1P51948 309 aa23.32■■□□□ 1.32
SH3D21-202ENST00000474766 EPHB4P54760 987 aa23.32■■□□□ 1.32
SH3D21-202ENST00000474766 SETQ01105 290 aaPredicted RBP23.32■■□□□ 1.32
SH3D21-202ENST00000474766 GRB10Q13322 594 aa23.32■■□□□ 1.32
SH3D21-202ENST00000474766 NNTQ13423 1086 aa23.32■■□□□ 1.32
SH3D21-202ENST00000474766 CALCRLQ16602 461 aa23.32■■□□□ 1.32
SH3D21-202ENST00000474766 ZNHIT6Q9NWK9 470 aaKnown RBP23.32■■□□□ 1.32
SH3D21-202ENST00000474766 STK17AQ9UEE5 414 aa23.32■■□□□ 1.32
SH3D21-202ENST00000474766 FSBPO95073 299 aa23.32■■□□□ 1.32
SH3D21-202ENST00000474766 MAP2K2P36507 400 aa23.32■■□□□ 1.32
SH3D21-202ENST00000474766 PDIA5Q14554 519 aa23.32■■□□□ 1.32
SH3D21-202ENST00000474766 ANKRD40Q6AI12 368 aa23.32■■□□□ 1.32
SH3D21-202ENST00000474766 SND1Q7KZF4 910 aaKnown RBP eCLIP23.32■■□□□ 1.32
SH3D21-202ENST00000474766 YTHDF3Q7Z739 585 aaKnown RBP23.32■■□□□ 1.32
SH3D21-202ENST00000474766 CAVIN3Q969G5 261 aa23.32■■□□□ 1.32
SH3D21-202ENST00000474766 RIC8AQ9NPQ8 531 aa23.32■■□□□ 1.32
SH3D21-202ENST00000474766 BLOC1S4Q9NUP1 217 aa23.32■■□□□ 1.32
SH3D21-202ENST00000474766 LRWD1Q9UFC0 647 aa23.32■■□□□ 1.32
SH3D21-202ENST00000474766 GREB1LQ9C091 1923 aaPredicted RBP23.31■■□□□ 1.32
SH3D21-202ENST00000474766 SLC37A4O43826 429 aa23.31■■□□□ 1.32
SH3D21-202ENST00000474766 USP2O75604 605 aaPredicted RBP23.31■■□□□ 1.32
SH3D21-202ENST00000474766 ZMYND10O75800 440 aa23.31■■□□□ 1.32
SH3D21-202ENST00000474766 IDEP14735 1019 aa23.31■■□□□ 1.32
SH3D21-202ENST00000474766 APBA1Q02410 837 aa23.31■■□□□ 1.32
SH3D21-202ENST00000474766 CLEC10AQ8IUN9 316 aa23.31■■□□□ 1.32
SH3D21-202ENST00000474766 ZSCAN29Q8IWY8 852 aaPredicted RBP23.31■■□□□ 1.32
SH3D21-202ENST00000474766 GSPT2Q8IYD1 628 aaKnown RBP23.31■■□□□ 1.32
SH3D21-202ENST00000474766 TUBGCP2Q9BSJ2 902 aa23.31■■□□□ 1.32
SH3D21-202ENST00000474766 GPCPD1Q9NPB8 672 aa23.31■■□□□ 1.32
SH3D21-202ENST00000474766 SNX12Q9UMY4 172 aa23.31■■□□□ 1.32
SH3D21-202ENST00000474766 DEFB115Q30KQ5 88 aa23.3■■□□□ 1.32
SH3D21-202ENST00000474766 EMC10Q5UCC4 262 aa23.3■■□□□ 1.32
SH3D21-202ENST00000474766 CNNM4Q6P4Q7 775 aa23.3■■□□□ 1.32
SH3D21-202ENST00000474766 ADGRF4Q8IZF3 695 aa23.3■■□□□ 1.32
SH3D21-202ENST00000474766 GDAP1L1Q96MZ0 367 aa23.3■■□□□ 1.32
SH3D21-202ENST00000474766 PNMA5Q96PV4 448 aa23.3■■□□□ 1.32
SH3D21-202ENST00000474766 CSRNP1Q96S65 589 aa23.3■■□□□ 1.32
SH3D21-202ENST00000474766 CXorf56Q9H5V9 222 aa23.3■■□□□ 1.32
SH3D21-202ENST00000474766 PPP1R12BO60237 982 aaPredicted RBP23.3■■□□□ 1.32
SH3D21-202ENST00000474766 TDP2O95551 362 aa23.3■■□□□ 1.32
SH3D21-202ENST00000474766 FCER1AP12319 257 aa23.3■■□□□ 1.32
SH3D21-202ENST00000474766 CLK2P49760 499 aaKnown RBP23.3■■□□□ 1.32
SH3D21-202ENST00000474766 PPP4R3AQ6IN85 833 aa23.3■■□□□ 1.32
SH3D21-202ENST00000474766 MICALCLQ6ZW33 695 aa23.3■■□□□ 1.32
SH3D21-202ENST00000474766 SV2BQ7L1I2 683 aa23.3■■□□□ 1.32
SH3D21-202ENST00000474766 MIGA2Q7L4E1 593 aa23.3■■□□□ 1.32
SH3D21-202ENST00000474766 FAM114A1Q8IWE2 563 aa23.3■■□□□ 1.32
SH3D21-202ENST00000474766 TRIM58Q8NG06 486 aa23.3■■□□□ 1.32
SH3D21-202ENST00000474766 CABS1Q96KC9 395 aa23.3■■□□□ 1.32
SH3D21-202ENST00000474766 DHX36Q9H2U1 1008 aaKnown RBP23.3■■□□□ 1.32
SH3D21-202ENST00000474766 PVALEFA0A1B0GWK0 134 aa23.29■■□□□ 1.32
SH3D21-202ENST00000474766 PPP1R11O60927 126 aaPredicted RBP23.29■■□□□ 1.32
SH3D21-202ENST00000474766 TMEM266Q2M3C6 531 aa23.29■■□□□ 1.32
SH3D21-202ENST00000474766 GPATCH4Q5T3I0 446 aaKnown RBP23.29■■□□□ 1.32
SH3D21-202ENST00000474766 ARMC9Q7Z3E5 817 aa23.29■■□□□ 1.32
SH3D21-202ENST00000474766 CREG2Q8IUH2 290 aa23.29■■□□□ 1.32
SH3D21-202ENST00000474766 KIAA0895Q8NCT3 520 aa23.29■■□□□ 1.32
SH3D21-202ENST00000474766 IQCDQ96DY2 449 aa23.29■■□□□ 1.32
SH3D21-202ENST00000474766 MTMR8Q96EF0 704 aa23.29■■□□□ 1.32
SH3D21-202ENST00000474766 TTYH3Q9C0H2 523 aa23.29■■□□□ 1.32
SH3D21-202ENST00000474766 KIAA0754O94854 1291 aa23.28■■□□□ 1.32
SH3D21-202ENST00000474766 FNTAP49354 379 aa23.28■■□□□ 1.32
SH3D21-202ENST00000474766 VAV2P52735 878 aa23.28■■□□□ 1.32
SH3D21-202ENST00000474766 C2orf54Q08AI8 447 aa23.28■■□□□ 1.32
SH3D21-202ENST00000474766 LDLRAD1Q5T700 205 aa23.28■■□□□ 1.32
SH3D21-202ENST00000474766 CYP4F22Q6NT55 531 aa23.28■■□□□ 1.32
SH3D21-202ENST00000474766 HHIPL1Q96JK4 782 aa23.28■■□□□ 1.32
SH3D21-202ENST00000474766 RUFY1Q96T51 708 aa23.28■■□□□ 1.32
SH3D21-202ENST00000474766 RAB34Q9BZG1 259 aa23.28■■□□□ 1.32
SH3D21-202ENST00000474766 EHD4Q9H223 541 aa23.28■■□□□ 1.32
SH3D21-202ENST00000474766 JADE2Q9NQC1 790 aa23.28■■□□□ 1.32
SH3D21-202ENST00000474766 SRRM3A6NNA2 597 aaPredicted RBP23.28■■□□□ 1.32
SH3D21-202ENST00000474766 B4DLN1 442 aa23.28■■□□□ 1.32
SH3D21-202ENST00000474766 HSF2BPO75031 334 aa23.28■■□□□ 1.32
SH3D21-202ENST00000474766 ZBED6P86452 979 aa23.28■■□□□ 1.32
SH3D21-202ENST00000474766 KIF5AQ12840 1032 aa23.28■■□□□ 1.32
SH3D21-202ENST00000474766 FBXW10Q5XX13 1052 aa23.28■■□□□ 1.32
SH3D21-202ENST00000474766 CENPPQ6IPU0 288 aa23.28■■□□□ 1.32
SH3D21-202ENST00000474766 GPATCH11Q8N954 259 aa23.28■■□□□ 1.32
SH3D21-202ENST00000474766 KLRG1Q96E93 195 aa23.28■■□□□ 1.32
SH3D21-202ENST00000474766 LACRTQ9GZZ8 138 aa23.28■■□□□ 1.32
SH3D21-202ENST00000474766 PI4KBQ9UBF8 816 aa23.28■■□□□ 1.32
SH3D21-202ENST00000474766 GGA2Q9UJY4 613 aa23.28■■□□□ 1.32
SH3D21-202ENST00000474766 MYMKA6NI61 221 aa23.27■■□□□ 1.32
SH3D21-202ENST00000474766 TULP1O00294 542 aaPredicted RBP23.27■■□□□ 1.32
SH3D21-202ENST00000474766 CLGNO14967 610 aa23.27■■□□□ 1.32
SH3D21-202ENST00000474766 ZNF185O15231 689 aa23.27■■□□□ 1.32
SH3D21-202ENST00000474766 MEFVO15553 781 aaPredicted RBP23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms