RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 CNGA1P29973 690 aa11.25□□□□□ -0.61
COL8A1-206ENST00000474648 SFNP31947 248 aa11.25□□□□□ -0.61
COL8A1-206ENST00000474648 JAK3P52333 1124 aa11.25□□□□□ -0.61
COL8A1-206ENST00000474648 UBE2HP62256 183 aa11.25□□□□□ -0.61
COL8A1-206ENST00000474648 SP4Q02446 784 aa11.25□□□□□ -0.61
COL8A1-206ENST00000474648 HYIQ5T013 277 aa11.25□□□□□ -0.61
COL8A1-206ENST00000474648 CATSPER3Q86XQ3 398 aa11.25□□□□□ -0.61
COL8A1-206ENST00000474648 SMAP1Q8IYB5 467 aaPredicted RBP11.25□□□□□ -0.61
COL8A1-206ENST00000474648 RDM1Q8NG50 284 aa11.25□□□□□ -0.61
COL8A1-206ENST00000474648 OR6J1Q8NGC5 347 aa11.25□□□□□ -0.61
COL8A1-206ENST00000474648 PPTC7Q8NI37 304 aa11.25□□□□□ -0.61
COL8A1-206ENST00000474648 AFG1LQ8WV93 481 aa11.25□□□□□ -0.61
COL8A1-206ENST00000474648 SEPT1Q8WYJ6 367 aa11.25□□□□□ -0.61
COL8A1-206ENST00000474648 PNMA5Q96PV4 448 aa11.25□□□□□ -0.61
COL8A1-206ENST00000474648 POLR3CQ9BUI4 534 aaPredicted RBP11.25□□□□□ -0.61
COL8A1-206ENST00000474648 RAB34Q9BZG1 259 aa11.25□□□□□ -0.61
COL8A1-206ENST00000474648 UPF3AQ9H1J1 476 aaKnown RBP11.25□□□□□ -0.61
COL8A1-206ENST00000474648 RGL1Q9NZL6 768 aa11.25□□□□□ -0.61
COL8A1-206ENST00000474648 PCDHA10Q9Y5I2 948 aa11.25□□□□□ -0.61
COL8A1-206ENST00000474648 CASP8AP2Q9UKL3 1982 aa11.25□□□□□ -0.61
COL8A1-206ENST00000474648 A0A1B0GVL5 298 aa11.24□□□□□ -0.61
COL8A1-206ENST00000474648 PPFIA4O75335 1185 aa11.24□□□□□ -0.61
COL8A1-206ENST00000474648 LGR5O75473 907 aa11.24□□□□□ -0.61
COL8A1-206ENST00000474648 STBD1O95210 358 aa11.24□□□□□ -0.61
COL8A1-206ENST00000474648 P4HBP07237 508 aaKnown RBP11.24□□□□□ -0.61
COL8A1-206ENST00000474648 SUPT20HL2P0C7V6 817 aa11.24□□□□□ -0.61
COL8A1-206ENST00000474648 RPA1P27694 616 aa11.24□□□□□ -0.61
COL8A1-206ENST00000474648 UBA7P41226 1012 aa11.24□□□□□ -0.61
COL8A1-206ENST00000474648 NDUFA8P51970 172 aa11.24□□□□□ -0.61
COL8A1-206ENST00000474648 GJA9P57773 515 aa11.24□□□□□ -0.61
COL8A1-206ENST00000474648 GRB10Q13322 594 aa11.24□□□□□ -0.61
COL8A1-206ENST00000474648 MTFR1Q15390 333 aa11.24□□□□□ -0.61
COL8A1-206ENST00000474648 TPRNQ4KMQ1 711 aa11.24□□□□□ -0.61
COL8A1-206ENST00000474648 KRT79Q5XKE5 535 aa11.24□□□□□ -0.61
COL8A1-206ENST00000474648 SWSAP1Q6NVH7 229 aa11.24□□□□□ -0.61
COL8A1-206ENST00000474648 MIS18BP1Q6P0N0 1132 aa11.24□□□□□ -0.61
COL8A1-206ENST00000474648 TLK2Q86UE8 772 aa11.24□□□□□ -0.61
COL8A1-206ENST00000474648 CABP7Q86V35 215 aa11.24□□□□□ -0.61
COL8A1-206ENST00000474648 FSIP1Q8NA03 581 aa11.24□□□□□ -0.61
COL8A1-206ENST00000474648 ENGASEQ8NFI3 743 aa11.24□□□□□ -0.61
COL8A1-206ENST00000474648 LRRC15Q8TF66 581 aa11.24□□□□□ -0.61
COL8A1-206ENST00000474648 MRPS27Q92552 414 aaKnown RBP11.24□□□□□ -0.61
COL8A1-206ENST00000474648 DYDC2Q96IM9 177 aa11.24□□□□□ -0.61
COL8A1-206ENST00000474648 PANK2Q9BZ23 570 aa11.24□□□□□ -0.61
COL8A1-206ENST00000474648 UNC93B1Q9H1C4 597 aa11.24□□□□□ -0.61
COL8A1-206ENST00000474648 HMX1Q9NP08 348 aaPredicted RBP11.24□□□□□ -0.61
COL8A1-206ENST00000474648 WRAP73Q9P2S5 460 aaPredicted RBP11.24□□□□□ -0.61
COL8A1-206ENST00000474648 DDX20Q9UHI6 824 aaKnown RBP11.24□□□□□ -0.61
COL8A1-206ENST00000474648 MAFBQ9Y5Q3 323 aaPredicted RBP11.24□□□□□ -0.61
COL8A1-206ENST00000474648 MCM3APO60318 1980 aa11.24□□□□□ -0.61
COL8A1-206ENST00000474648 A0A087WWV3 80 aa11.23□□□□□ -0.61
COL8A1-206ENST00000474648 MYADML2A6NDP7 307 aa11.23□□□□□ -0.61
COL8A1-206ENST00000474648 GOLGA6L4A6NEF3 574 aa11.23□□□□□ -0.61
COL8A1-206ENST00000474648 GOLGA6L22H0YM25 854 aa11.23□□□□□ -0.61
COL8A1-206ENST00000474648 SLC26A4O43511 780 aa11.23□□□□□ -0.61
COL8A1-206ENST00000474648 ZNF862O60290 1169 aa11.23□□□□□ -0.61
COL8A1-206ENST00000474648 ADAMTS4O75173 837 aa11.23□□□□□ -0.61
COL8A1-206ENST00000474648 LYPLA2O95372 231 aa11.23□□□□□ -0.61
COL8A1-206ENST00000474648 PSAPP07602 524 aa11.23□□□□□ -0.61
COL8A1-206ENST00000474648 MMP3P08254 477 aa11.23□□□□□ -0.61
COL8A1-206ENST00000474648 RARBP10826 455 aa11.23□□□□□ -0.61
COL8A1-206ENST00000474648 PFKFB1P16118 471 aa11.23□□□□□ -0.61
COL8A1-206ENST00000474648 LIG1P18858 919 aa11.23□□□□□ -0.61
COL8A1-206ENST00000474648 ATP4AP20648 1035 aa11.23□□□□□ -0.61
COL8A1-206ENST00000474648 TCF7P36402 384 aaPredicted RBP11.23□□□□□ -0.61
COL8A1-206ENST00000474648 CCT6AP40227 531 aaKnown RBP11.23□□□□□ -0.61
COL8A1-206ENST00000474648 SNW1Q13573 536 aaKnown RBP11.23□□□□□ -0.61
COL8A1-206ENST00000474648 CTTNQ14247 550 aaKnown RBP11.23□□□□□ -0.61
COL8A1-206ENST00000474648 KARSQ15046 597 aaKnown RBP11.23□□□□□ -0.61
COL8A1-206ENST00000474648 NFKBIBQ15653 356 aa11.23□□□□□ -0.61
COL8A1-206ENST00000474648 UGCGQ16739 394 aa11.23□□□□□ -0.61
COL8A1-206ENST00000474648 SLC9C1Q4G0N8 1177 aa11.23□□□□□ -0.61
COL8A1-206ENST00000474648 TMEM119Q4V9L6 283 aa11.23□□□□□ -0.61
COL8A1-206ENST00000474648 CCDC60Q8IWA6 550 aaPredicted RBP11.23□□□□□ -0.61
COL8A1-206ENST00000474648 HS6ST3Q8IZP7 471 aa11.23□□□□□ -0.61
COL8A1-206ENST00000474648 KLHDC9Q8NEP7 349 aa11.23□□□□□ -0.61
COL8A1-206ENST00000474648 GPT2Q8TD30 523 aa11.23□□□□□ -0.61
COL8A1-206ENST00000474648 AFAP1L1Q8TED9 768 aa11.23□□□□□ -0.61
COL8A1-206ENST00000474648 SNX29Q8TEQ0 813 aa11.23□□□□□ -0.61
COL8A1-206ENST00000474648 ARMC5Q96C12 935 aa11.23□□□□□ -0.61
COL8A1-206ENST00000474648 ZNF333Q96JL9 665 aa11.23□□□□□ -0.61
COL8A1-206ENST00000474648 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.23□□□□□ -0.61
COL8A1-206ENST00000474648 AP5M1Q9H0R1 490 aa11.23□□□□□ -0.61
COL8A1-206ENST00000474648 TUFT1Q9NNX1 390 aa11.23□□□□□ -0.61
COL8A1-206ENST00000474648 PAK6Q9NQU5 681 aaPredicted RBP11.23□□□□□ -0.61
COL8A1-206ENST00000474648 FAM13BQ9NYF5 915 aa11.23□□□□□ -0.61
COL8A1-206ENST00000474648 GABBR1Q9UBS5 961 aa11.23□□□□□ -0.61
COL8A1-206ENST00000474648 KCNH3Q9ULD8 1083 aa11.23□□□□□ -0.61
COL8A1-206ENST00000474648 SAMM50Q9Y512 469 aa11.23□□□□□ -0.61
COL8A1-206ENST00000474648 HTTP42858 3142 aa11.23□□□□□ -0.61
COL8A1-206ENST00000474648 MYH15Q9Y2K3 1946 aa11.23□□□□□ -0.61
COL8A1-206ENST00000474648 POTEB3A0JP26 581 aa11.22□□□□□ -0.61
COL8A1-206ENST00000474648 NOP56O00567 594 aaKnown RBP11.22□□□□□ -0.61
COL8A1-206ENST00000474648 ZBTB39O15060 712 aa11.22□□□□□ -0.61
COL8A1-206ENST00000474648 PGK1P00558 417 aa11.22□□□□□ -0.61
COL8A1-206ENST00000474648 CCL5P13501 91 aa11.22□□□□□ -0.61
COL8A1-206ENST00000474648 MUTP22033 750 aa11.22□□□□□ -0.61
COL8A1-206ENST00000474648 QARSP47897 775 aaKnown RBP11.22□□□□□ -0.61
COL8A1-206ENST00000474648 PSMC5P62195 406 aa11.22□□□□□ -0.61
COL8A1-206ENST00000474648 PSMC6P62333 389 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms