RNA–Protein interactions for RNA: ENST00000474323.5

SAMM50-203, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 2,368 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-203ENST00000474323 KLHL7Q8IXQ5 586 aa15.9■□□□□ 0.14
SAMM50-203ENST00000474323 NLGN1Q8N2Q7 840 aa15.9■□□□□ 0.14
SAMM50-203ENST00000474323 MIGA1Q8NAN2 632 aa15.9■□□□□ 0.14
SAMM50-203ENST00000474323 UBLCP1Q8WVY7 318 aaPredicted RBP15.9■□□□□ 0.14
SAMM50-203ENST00000474323 FAM129AQ9BZQ8 928 aa15.9■□□□□ 0.14
SAMM50-203ENST00000474323 CORO1CQ9ULV4 474 aaPredicted RBP15.9■□□□□ 0.14
SAMM50-203ENST00000474323 ABCB11O95342 1321 aa15.9■□□□□ 0.14
SAMM50-203ENST00000474323 PNPLA7Q6ZV29 1317 aa15.9■□□□□ 0.14
SAMM50-203ENST00000474323 PRKAB2O43741 272 aa15.89■□□□□ 0.13
SAMM50-203ENST00000474323 SMNDC1O75940 238 aaKnown RBP eCLIP15.89■□□□□ 0.13
SAMM50-203ENST00000474323 FTCDO95954 541 aa15.89■□□□□ 0.13
SAMM50-203ENST00000474323 UBA7P41226 1012 aa15.89■□□□□ 0.13
SAMM50-203ENST00000474323 PDXDC1Q6P996 788 aa15.89■□□□□ 0.13
SAMM50-203ENST00000474323 PNMA8AQ86V59 439 aaPredicted RBP15.89■□□□□ 0.13
SAMM50-203ENST00000474323 GPR101Q96P66 508 aaPredicted RBP15.89■□□□□ 0.13
SAMM50-203ENST00000474323 FBXL5Q9UKA1 691 aa15.89■□□□□ 0.13
SAMM50-203ENST00000474323 JAG2Q9Y219 1238 aa15.89■□□□□ 0.13
SAMM50-203ENST00000474323 PDE4DQ08499 809 aa15.89■□□□□ 0.13
SAMM50-203ENST00000474323 MAN2A1Q16706 1144 aa15.89■□□□□ 0.13
SAMM50-203ENST00000474323 HGSNATQ68CP4 663 aa15.89■□□□□ 0.13
SAMM50-203ENST00000474323 PIGWQ7Z7B1 504 aa15.89■□□□□ 0.13
SAMM50-203ENST00000474323 STAG2Q8N3U4 1231 aa15.89■□□□□ 0.13
SAMM50-203ENST00000474323 SCFD2Q8WU76 684 aa15.89■□□□□ 0.13
SAMM50-203ENST00000474323 RBM17Q96I25 401 aaKnown RBP15.89■□□□□ 0.13
SAMM50-203ENST00000474323 ZNF317Q96PQ6 595 aaPredicted RBP15.89■□□□□ 0.13
SAMM50-203ENST00000474323 NUCKS1Q9H1E3 243 aaKnown RBP15.89■□□□□ 0.13
SAMM50-203ENST00000474323 CYP7A1P22680 504 aa15.88■□□□□ 0.13
SAMM50-203ENST00000474323 RWDD2BP57060 319 aa15.88■□□□□ 0.13
SAMM50-203ENST00000474323 EHHADHQ08426 723 aa15.88■□□□□ 0.13
SAMM50-203ENST00000474323 SLC9C1Q4G0N8 1177 aa15.88■□□□□ 0.13
SAMM50-203ENST00000474323 TMTC3Q6ZXV5 915 aa15.88■□□□□ 0.13
SAMM50-203ENST00000474323 ADGRA1Q86SQ6 560 aa15.88■□□□□ 0.13
SAMM50-203ENST00000474323 ENAHQ8N8S7 591 aaPredicted RBP15.88■□□□□ 0.13
SAMM50-203ENST00000474323 TAF4BQ92750 862 aa15.88■□□□□ 0.13
SAMM50-203ENST00000474323 TLCD1Q96CP7 247 aa15.88■□□□□ 0.13
SAMM50-203ENST00000474323 CALR3Q96L12 384 aaKnown RBP15.88■□□□□ 0.13
SAMM50-203ENST00000474323 KCNMB3Q9NPA1 279 aa15.88■□□□□ 0.13
SAMM50-203ENST00000474323 L3MBTL1Q9Y468 752 aa15.88■□□□□ 0.13
SAMM50-203ENST00000474323 GOLGB1Q14789 3259 aaKnown RBP15.88■□□□□ 0.13
SAMM50-203ENST00000474323 EME2A4GXA9 379 aaPredicted RBP15.87■□□□□ 0.13
SAMM50-203ENST00000474323 CTNND1O60716 968 aaKnown RBP15.87■□□□□ 0.13
SAMM50-203ENST00000474323 DNA2P51530 1060 aa15.87■□□□□ 0.13
SAMM50-203ENST00000474323 EIF3BP55884 814 aaKnown RBP15.87■□□□□ 0.13
SAMM50-203ENST00000474323 RNASE9P60153 205 aaKnown RBP15.87■□□□□ 0.13
SAMM50-203ENST00000474323 PPARDQ03181 441 aa15.87■□□□□ 0.13
SAMM50-203ENST00000474323 EN1Q05925 392 aaPredicted RBP15.87■□□□□ 0.13
SAMM50-203ENST00000474323 TROAPQ12815 778 aa15.87■□□□□ 0.13
SAMM50-203ENST00000474323 STK4Q13043 487 aa15.87■□□□□ 0.13
SAMM50-203ENST00000474323 RBBP5Q15291 538 aaKnown RBP15.87■□□□□ 0.13
SAMM50-203ENST00000474323 KRT71Q3SY84 523 aa15.87■□□□□ 0.13
SAMM50-203ENST00000474323 IFIT1BQ5T764 474 aaKnown RBP15.87■□□□□ 0.13
SAMM50-203ENST00000474323 CACNA2D4Q7Z3S7 1137 aa15.87■□□□□ 0.13
SAMM50-203ENST00000474323 LCORLQ8N3X6 602 aa15.87■□□□□ 0.13
SAMM50-203ENST00000474323 CCDC26Q8TAB7 109 aa15.87■□□□□ 0.13
SAMM50-203ENST00000474323 AGAP11Q8TF27 550 aa15.87■□□□□ 0.13
SAMM50-203ENST00000474323 SYN2Q92777 582 aaPredicted RBP15.87■□□□□ 0.13
SAMM50-203ENST00000474323 ZSCAN10Q96SZ4 725 aaPredicted RBP15.87■□□□□ 0.13
SAMM50-203ENST00000474323 MOV10L1Q9BXT6 1211 aaKnown RBP15.87■□□□□ 0.13
SAMM50-203ENST00000474323 ETAA1Q9NY74 926 aa15.87■□□□□ 0.13
SAMM50-203ENST00000474323 NKRFO15226 690 aaKnown RBP eCLIP15.87■□□□□ 0.13
SAMM50-203ENST00000474323 MMP10P09238 476 aa15.87■□□□□ 0.13
SAMM50-203ENST00000474323 CCND1P24385 295 aa15.87■□□□□ 0.13
SAMM50-203ENST00000474323 GPSM2P81274 684 aa15.87■□□□□ 0.13
SAMM50-203ENST00000474323 TDRD12Q587J7 1177 aaKnown RBP15.87■□□□□ 0.13
SAMM50-203ENST00000474323 SPDYCQ5MJ68 293 aa15.87■□□□□ 0.13
SAMM50-203ENST00000474323 CENPPQ6IPU0 288 aa15.87■□□□□ 0.13
SAMM50-203ENST00000474323 TBC1D1Q86TI0 1168 aaPredicted RBP15.87■□□□□ 0.13
SAMM50-203ENST00000474323 MICAL1Q8TDZ2 1067 aa15.87■□□□□ 0.13
SAMM50-203ENST00000474323 PBKQ96KB5 322 aa15.87■□□□□ 0.13
SAMM50-203ENST00000474323 ZNF570Q96NI8 536 aa15.87■□□□□ 0.13
SAMM50-203ENST00000474323 DCDC2CA8MYV0 355 aa15.86■□□□□ 0.13
SAMM50-203ENST00000474323 FGFR1OPO95684 399 aaKnown RBP15.86■□□□□ 0.13
SAMM50-203ENST00000474323 SCG2P13521 617 aa15.86■□□□□ 0.13
SAMM50-203ENST00000474323 KLRC1P26715 233 aa15.86■□□□□ 0.13
SAMM50-203ENST00000474323 PEX19P40855 299 aa15.86■□□□□ 0.13
SAMM50-203ENST00000474323 FLAD1Q8NFF5 587 aa15.86■□□□□ 0.13
SAMM50-203ENST00000474323 ACTRT1Q8TDG2 376 aa15.86■□□□□ 0.13
SAMM50-203ENST00000474323 CNKSR1Q969H4 720 aa15.86■□□□□ 0.13
SAMM50-203ENST00000474323 TRIM9Q9C026 710 aa15.86■□□□□ 0.13
SAMM50-203ENST00000474323 PANK4Q9NVE7 773 aa15.86■□□□□ 0.13
SAMM50-203ENST00000474323 ANAPC4Q9UJX5 808 aa15.86■□□□□ 0.13
SAMM50-203ENST00000474323 CNTNAP5Q8WYK1 1306 aa15.86■□□□□ 0.13
SAMM50-203ENST00000474323 IRS2Q9Y4H2 1338 aa15.86■□□□□ 0.13
SAMM50-203ENST00000474323 MYH7BA7E2Y1 1941 aa15.86■□□□□ 0.13
SAMM50-203ENST00000474323 SART1O43290 800 aaKnown RBP15.86■□□□□ 0.13
SAMM50-203ENST00000474323 DDAH1O94760 285 aa15.86■□□□□ 0.13
SAMM50-203ENST00000474323 SERPING1P05155 500 aa15.86■□□□□ 0.13
SAMM50-203ENST00000474323 CALML3P27482 149 aa15.86■□□□□ 0.13
SAMM50-203ENST00000474323 CNNM4Q6P4Q7 775 aa15.86■□□□□ 0.13
SAMM50-203ENST00000474323 TRPM8Q7Z2W7 1104 aa15.86■□□□□ 0.13
SAMM50-203ENST00000474323 TMC4Q7Z404 712 aa15.86■□□□□ 0.13
SAMM50-203ENST00000474323 TMC3Q7Z5M5 1100 aa15.86■□□□□ 0.13
SAMM50-203ENST00000474323 C7orf25Q9BPX7 421 aa15.86■□□□□ 0.13
SAMM50-203ENST00000474323 SLC5A4Q9NY91 659 aa15.86■□□□□ 0.13
SAMM50-203ENST00000474323 ANKRD31Q8N7Z5 1873 aa15.86■□□□□ 0.13
SAMM50-203ENST00000474323 RPS6KA1Q15418 735 aa15.85■□□□□ 0.13
SAMM50-203ENST00000474323 CCDC178Q5BJE1 867 aa15.85■□□□□ 0.13
SAMM50-203ENST00000474323 DDX42Q86XP3 938 aaKnown RBP eCLIP15.85■□□□□ 0.13
SAMM50-203ENST00000474323 NEUROG2Q9H2A3 272 aa15.85■□□□□ 0.13
SAMM50-203ENST00000474323 SEMA6BQ9H3T3 888 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms