RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 PTPN22Q9Y2R2 807 aa3.72□□□□□ -1.81
CCDC39-203ENST00000473854 ZNF839A8K0R7 811 aa3.71□□□□□ -1.82
CCDC39-203ENST00000473854 CAPN14A8MX76 684 aa3.71□□□□□ -1.82
CCDC39-203ENST00000473854 INO80B-WBP1J3KQ70 363 aa3.71□□□□□ -1.82
CCDC39-203ENST00000473854 ITGAVP06756 1048 aa3.71□□□□□ -1.82
CCDC39-203ENST00000473854 SNRPB2P08579 225 aaKnown RBP3.71□□□□□ -1.82
CCDC39-203ENST00000473854 GIPRP48546 466 aa3.71□□□□□ -1.82
CCDC39-203ENST00000473854 PFKPQ01813 784 aa3.71□□□□□ -1.82
CCDC39-203ENST00000473854 NCAPHQ15003 741 aa3.71□□□□□ -1.82
CCDC39-203ENST00000473854 CD276Q5ZPR3 534 aa3.71□□□□□ -1.82
CCDC39-203ENST00000473854 Q6ZPA2 131 aa3.71□□□□□ -1.82
CCDC39-203ENST00000473854 PPIL6Q8IXY8 311 aa3.71□□□□□ -1.82
CCDC39-203ENST00000473854 D2HGDHQ8N465 521 aa3.71□□□□□ -1.82
CCDC39-203ENST00000473854 MPHOSPH9Q99550 1183 aa3.71□□□□□ -1.82
CCDC39-203ENST00000473854 INO80BQ9C086 356 aaPredicted RBP3.71□□□□□ -1.82
CCDC39-203ENST00000473854 RIOX1Q9H6W3 641 aa3.71□□□□□ -1.82
CCDC39-203ENST00000473854 PMS2P1A4D2B8 440 aa3.7□□□□□ -1.82
CCDC39-203ENST00000473854 PPFIA4O75335 1185 aa3.7□□□□□ -1.82
CCDC39-203ENST00000473854 ECI1P42126 302 aa3.7□□□□□ -1.82
CCDC39-203ENST00000473854 RRADP55042 308 aa3.7□□□□□ -1.82
CCDC39-203ENST00000473854 GRIN1Q05586 938 aa3.7□□□□□ -1.82
CCDC39-203ENST00000473854 MRPL58Q14197 206 aaKnown RBP3.7□□□□□ -1.82
CCDC39-203ENST00000473854 RPUSD2Q8IZ73 545 aaKnown RBP3.7□□□□□ -1.82
CCDC39-203ENST00000473854 ANKRD35Q8N283 1001 aa3.7□□□□□ -1.82
CCDC39-203ENST00000473854 TACO1Q9BSH4 297 aaKnown RBP3.7□□□□□ -1.82
CCDC39-203ENST00000473854 ZNHIT2Q9UHR6 403 aa3.7□□□□□ -1.82
CCDC39-203ENST00000473854 FBXL7Q9UJT9 491 aa3.7□□□□□ -1.82
CCDC39-203ENST00000473854 MATN2O00339 956 aa3.69□□□□□ -1.82
CCDC39-203ENST00000473854 SLC27A2O14975 620 aa3.69□□□□□ -1.82
CCDC39-203ENST00000473854 HMGCRP04035 888 aa3.69□□□□□ -1.82
CCDC39-203ENST00000473854 ZNF76P36508 570 aa3.69□□□□□ -1.82
CCDC39-203ENST00000473854 CASP7P55210 303 aa3.69□□□□□ -1.82
CCDC39-203ENST00000473854 TAGLNQ01995 201 aaKnown RBP3.69□□□□□ -1.82
CCDC39-203ENST00000473854 GRM7Q14831 915 aa3.69□□□□□ -1.82
CCDC39-203ENST00000473854 PPP2R5EQ16537 467 aa3.69□□□□□ -1.82
CCDC39-203ENST00000473854 ZNF326Q5BKZ1 582 aaKnown RBP3.69□□□□□ -1.82
CCDC39-203ENST00000473854 EPHA10Q5JZY3 1008 aa3.69□□□□□ -1.82
CCDC39-203ENST00000473854 CCDC81Q6ZN84 652 aa3.69□□□□□ -1.82
CCDC39-203ENST00000473854 USP30Q70CQ3 517 aa3.69□□□□□ -1.82
CCDC39-203ENST00000473854 PACSIN3Q9UKS6 424 aa3.69□□□□□ -1.82
CCDC39-203ENST00000473854 ESYT3A0FGR9 886 aa3.68□□□□□ -1.82
CCDC39-203ENST00000473854 ZAR1LA6NP61 321 aa3.68□□□□□ -1.82
CCDC39-203ENST00000473854 PROB1E7EW31 1015 aa3.68□□□□□ -1.82
CCDC39-203ENST00000473854 TRAF5O00463 557 aa3.68□□□□□ -1.82
CCDC39-203ENST00000473854 IL18BPO95998 194 aa3.68□□□□□ -1.82
CCDC39-203ENST00000473854 SOX9P48436 509 aa3.68□□□□□ -1.82
CCDC39-203ENST00000473854 CYP4F3Q08477 520 aa3.68□□□□□ -1.82
CCDC39-203ENST00000473854 SPIRE1Q08AE8 756 aa3.68□□□□□ -1.82
CCDC39-203ENST00000473854 TUSC3Q13454 348 aa3.68□□□□□ -1.82
CCDC39-203ENST00000473854 RRP1BQ14684 758 aaKnown RBP3.68□□□□□ -1.82
CCDC39-203ENST00000473854 STRIP1Q5VSL9 837 aa3.68□□□□□ -1.82
CCDC39-203ENST00000473854 CXXC5Q7LFL8 322 aaKnown RBP3.68□□□□□ -1.82
CCDC39-203ENST00000473854 KREMEN2Q8NCW0 462 aa3.68□□□□□ -1.82
CCDC39-203ENST00000473854 UHMK1Q8TAS1 419 aaKnown RBP3.68□□□□□ -1.82
CCDC39-203ENST00000473854 PIP4K2CQ8TBX8 421 aa3.68□□□□□ -1.82
CCDC39-203ENST00000473854 BTN2A2Q8WVV5 523 aa3.68□□□□□ -1.82
CCDC39-203ENST00000473854 CLEC4DQ8WXI8 215 aa3.68□□□□□ -1.82
CCDC39-203ENST00000473854 HAS1Q92839 578 aa3.68□□□□□ -1.82
CCDC39-203ENST00000473854 ZDHHC5Q9C0B5 715 aa3.68□□□□□ -1.82
CCDC39-203ENST00000473854 KCNJ6P48051 423 aa3.67□□□□□ -1.82
CCDC39-203ENST00000473854 CNGB1Q14028 1251 aaPredicted RBP3.67□□□□□ -1.82
CCDC39-203ENST00000473854 WDR72Q3MJ13 1102 aa3.67□□□□□ -1.82
CCDC39-203ENST00000473854 ZNF362Q5T0B9 420 aaPredicted RBP3.67□□□□□ -1.82
CCDC39-203ENST00000473854 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.67□□□□□ -1.82
CCDC39-203ENST00000473854 ADGRG3Q86Y34 549 aa3.67□□□□□ -1.82
CCDC39-203ENST00000473854 SYNE4Q8N205 404 aa3.67□□□□□ -1.82
CCDC39-203ENST00000473854 TMEM87AQ8NBN3 555 aa3.67□□□□□ -1.82
CCDC39-203ENST00000473854 TRAIPQ9BWF2 469 aa3.67□□□□□ -1.82
CCDC39-203ENST00000473854 OR10A2Q9H208 303 aa3.67□□□□□ -1.82
CCDC39-203ENST00000473854 NRDE2Q9H7Z3 1164 aa3.67□□□□□ -1.82
CCDC39-203ENST00000473854 PROZP22891 400 aa3.66□□□□□ -1.82
CCDC39-203ENST00000473854 MEOX1P50221 254 aa3.66□□□□□ -1.82
CCDC39-203ENST00000473854 KRTAP10-7P60409 375 aaPredicted RBP3.66□□□□□ -1.82
CCDC39-203ENST00000473854 OTOP3Q7RTS5 596 aa3.66□□□□□ -1.82
CCDC39-203ENST00000473854 CFHR4Q92496 578 aa3.66□□□□□ -1.82
CCDC39-203ENST00000473854 METTL5Q9NRN9 209 aaKnown RBP3.66□□□□□ -1.82
CCDC39-203ENST00000473854 GINM1Q9NU53 330 aa3.66□□□□□ -1.82
CCDC39-203ENST00000473854 LRP2BPQ9P2M1 347 aa3.66□□□□□ -1.82
CCDC39-203ENST00000473854 NPFFR2Q9Y5X5 522 aa3.66□□□□□ -1.82
CCDC39-203ENST00000473854 ARNTLO00327 626 aa3.65□□□□□ -1.83
CCDC39-203ENST00000473854 SLC26A4O43511 780 aa3.65□□□□□ -1.83
CCDC39-203ENST00000473854 LCP1P13796 627 aa3.65□□□□□ -1.83
CCDC39-203ENST00000473854 CTGFP29279 349 aa3.65□□□□□ -1.83
CCDC39-203ENST00000473854 EPHA5P54756 1037 aa3.65□□□□□ -1.83
CCDC39-203ENST00000473854 NOLC1Q14978 699 aaKnown RBP eCLIP3.65□□□□□ -1.83
CCDC39-203ENST00000473854 SHCBP1Q8NEM2 672 aa3.65□□□□□ -1.83
CCDC39-203ENST00000473854 LENG9Q96B70 501 aa3.65□□□□□ -1.83
CCDC39-203ENST00000473854 GPR27Q9NS67 375 aa3.65□□□□□ -1.83
CCDC39-203ENST00000473854 GPRC5BQ9NZH0 403 aa3.65□□□□□ -1.83
CCDC39-203ENST00000473854 GNAT1P11488 350 aa3.64□□□□□ -1.83
CCDC39-203ENST00000473854 MAN2A2P49641 1150 aa3.64□□□□□ -1.83
CCDC39-203ENST00000473854 GFRA1P56159 465 aa3.64□□□□□ -1.83
CCDC39-203ENST00000473854 PTPAQ15257 358 aa3.64□□□□□ -1.83
CCDC39-203ENST00000473854 COLEC12Q5KU26 742 aa3.64□□□□□ -1.83
CCDC39-203ENST00000473854 LY6G5CQ5SRR4 150 aa3.64□□□□□ -1.83
CCDC39-203ENST00000473854 MBNL2Q5VZF2 373 aaKnown RBP3.64□□□□□ -1.83
CCDC39-203ENST00000473854 PAPD7Q5XG87 772 aaKnown RBP3.64□□□□□ -1.83
CCDC39-203ENST00000473854 RSPO2Q6UXX9 243 aaPredicted RBP3.64□□□□□ -1.83
CCDC39-203ENST00000473854 MICALCLQ6ZW33 695 aa3.64□□□□□ -1.83
CCDC39-203ENST00000473854 KCTD1Q719H9 257 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms