RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 DDR2Q16832 855 aa3.15□□□□□ -1.91
CALD1-216ENST00000473714 LRRFIP1Q32MZ4 808 aaKnown RBP3.15□□□□□ -1.91
CALD1-216ENST00000473714 SCARA3Q6AZY7 606 aa3.15□□□□□ -1.91
CALD1-216ENST00000473714 NOL8Q76FK4 1167 aaKnown RBP3.15□□□□□ -1.91
CALD1-216ENST00000473714 Q7L0L9 218 aa3.15□□□□□ -1.91
CALD1-216ENST00000473714 LRP10Q7Z4F1 713 aa3.15□□□□□ -1.91
CALD1-216ENST00000473714 REC114Q7Z4M0 266 aa3.15□□□□□ -1.91
CALD1-216ENST00000473714 NLRX1Q86UT6 975 aa3.15□□□□□ -1.91
CALD1-216ENST00000473714 PNMA8AQ86V59 439 aaPredicted RBP3.15□□□□□ -1.91
CALD1-216ENST00000473714 ZFPM1Q8IX07 1006 aa3.15□□□□□ -1.91
CALD1-216ENST00000473714 REXO1Q8N1G1 1221 aaKnown RBP3.15□□□□□ -1.91
CALD1-216ENST00000473714 NLGN1Q8N2Q7 840 aa3.15□□□□□ -1.91
CALD1-216ENST00000473714 SH3TC2Q8TF17 1288 aa3.15□□□□□ -1.91
CALD1-216ENST00000473714 VWCEQ96DN2 955 aa3.15□□□□□ -1.91
CALD1-216ENST00000473714 Q96M66 194 aa3.15□□□□□ -1.91
CALD1-216ENST00000473714 IPO9Q96P70 1041 aaKnown RBP3.15□□□□□ -1.91
CALD1-216ENST00000473714 C1QTNF1Q9BXJ1 281 aa3.15□□□□□ -1.91
CALD1-216ENST00000473714 SPC25Q9HBM1 224 aa3.15□□□□□ -1.91
CALD1-216ENST00000473714 FANCLQ9NW38 375 aa3.15□□□□□ -1.91
CALD1-216ENST00000473714 RNF186Q9NXI6 227 aa3.15□□□□□ -1.91
CALD1-216ENST00000473714 PFDN2Q9UHV9 154 aa3.15□□□□□ -1.91
CALD1-216ENST00000473714 HDAC9Q9UKV0 1011 aa3.15□□□□□ -1.91
CALD1-216ENST00000473714 BRCA2P51587 3418 aa3.15□□□□□ -1.91
CALD1-216ENST00000473714 DOT1LQ8TEK3 1739 aa3.15□□□□□ -1.91
CALD1-216ENST00000473714 ABCC11Q96J66 1382 aa3.14□□□□□ -1.91
CALD1-216ENST00000473714 C4BP0C0L5 1744 aa3.14□□□□□ -1.91
CALD1-216ENST00000473714 LAMA3Q16787 3333 aa3.14□□□□□ -1.91
CALD1-216ENST00000473714 NSD3Q9BZ95 1437 aa3.14□□□□□ -1.91
CALD1-216ENST00000473714 FAM221BA6H8Z2 402 aa3.14□□□□□ -1.91
CALD1-216ENST00000473714 KRT37O76014 449 aa3.14□□□□□ -1.91
CALD1-216ENST00000473714 GCP02774 474 aa3.14□□□□□ -1.91
CALD1-216ENST00000473714 SLPIP03973 132 aa3.14□□□□□ -1.91
CALD1-216ENST00000473714 CNGA1P29973 690 aa3.14□□□□□ -1.91
CALD1-216ENST00000473714 GIPRP48546 466 aa3.14□□□□□ -1.91
CALD1-216ENST00000473714 YBX1P67809 324 aaKnown RBP3.14□□□□□ -1.91
CALD1-216ENST00000473714 CLCQ05315 142 aa3.14□□□□□ -1.91
CALD1-216ENST00000473714 SERINC3Q13530 473 aa3.14□□□□□ -1.91
CALD1-216ENST00000473714 SLC14A2Q15849 920 aa3.14□□□□□ -1.91
CALD1-216ENST00000473714 WIPI1Q5MNZ9 446 aaPredicted RBP3.14□□□□□ -1.91
CALD1-216ENST00000473714 USP51Q70EK9 711 aa3.14□□□□□ -1.91
CALD1-216ENST00000473714 LSRQ86X29 649 aaPredicted RBP3.14□□□□□ -1.91
CALD1-216ENST00000473714 SHDQ96IW2 340 aa3.14□□□□□ -1.91
CALD1-216ENST00000473714 RNPC3Q96LT9 517 aaKnown RBP3.14□□□□□ -1.91
CALD1-216ENST00000473714 GPR62Q9BZJ7 368 aa3.14□□□□□ -1.91
CALD1-216ENST00000473714 CCDC113Q9H0I3 377 aa3.14□□□□□ -1.91
CALD1-216ENST00000473714 CRTAC1Q9NQ79 661 aa3.14□□□□□ -1.91
CALD1-216ENST00000473714 KCNQ5Q9NR82 932 aa3.14□□□□□ -1.91
CALD1-216ENST00000473714 IFT57Q9NWB7 429 aa3.14□□□□□ -1.91
CALD1-216ENST00000473714 KCNH3Q9ULD8 1083 aa3.14□□□□□ -1.91
CALD1-216ENST00000473714 NOP58Q9Y2X3 529 aaKnown RBP3.14□□□□□ -1.91
CALD1-216ENST00000473714 COL4A3BPQ9Y5P4 624 aa3.14□□□□□ -1.91
CALD1-216ENST00000473714 LAMA2P24043 3122 aaKnown RBP3.14□□□□□ -1.91
CALD1-216ENST00000473714 ACEP12821 1306 aa3.14□□□□□ -1.91
CALD1-216ENST00000473714 CACNA1BQ00975 2339 aa3.14□□□□□ -1.91
CALD1-216ENST00000473714 C4AP0C0L4 1744 aa3.13□□□□□ -1.91
CALD1-216ENST00000473714 FAM86C2PA6NEL3 165 aa3.13□□□□□ -1.91
CALD1-216ENST00000473714 AGRPO00253 132 aa3.13□□□□□ -1.91
CALD1-216ENST00000473714 FFAR3O14843 346 aa3.13□□□□□ -1.91
CALD1-216ENST00000473714 MARCH6O60337 910 aa3.13□□□□□ -1.91
CALD1-216ENST00000473714 EFEMP2O95967 443 aa3.13□□□□□ -1.91
CALD1-216ENST00000473714 ITGB3P05106 788 aa3.13□□□□□ -1.91
CALD1-216ENST00000473714 PLCG1P19174 1290 aa3.13□□□□□ -1.91
CALD1-216ENST00000473714 TACR2P21452 398 aa3.13□□□□□ -1.91
CALD1-216ENST00000473714 GARTP22102 1010 aa3.13□□□□□ -1.91
CALD1-216ENST00000473714 GRK4P32298 578 aa3.13□□□□□ -1.91
CALD1-216ENST00000473714 EPHX2P34913 555 aa3.13□□□□□ -1.91
CALD1-216ENST00000473714 CAP1Q01518 475 aa3.13□□□□□ -1.91
CALD1-216ENST00000473714 RPL6Q02878 288 aaKnown RBP3.13□□□□□ -1.91
CALD1-216ENST00000473714 PDE4BQ07343 736 aa3.13□□□□□ -1.91
CALD1-216ENST00000473714 SSRP1Q08945 709 aaKnown RBP3.13□□□□□ -1.91
CALD1-216ENST00000473714 LRIT3Q3SXY7 679 aa3.13□□□□□ -1.91
CALD1-216ENST00000473714 CT47A1Q5JQC4 288 aaPredicted RBP3.13□□□□□ -1.91
CALD1-216ENST00000473714 NT5DC1Q5TFE4 455 aa3.13□□□□□ -1.91
CALD1-216ENST00000473714 EEPD1Q7L9B9 569 aa3.13□□□□□ -1.91
CALD1-216ENST00000473714 IGDCC3Q8IVU1 814 aa3.13□□□□□ -1.91
CALD1-216ENST00000473714 CELF2-AS1Q8N7Q2 184 aa3.13□□□□□ -1.91
CALD1-216ENST00000473714 LINC01599Q8WXQ3 324 aa3.13□□□□□ -1.91
CALD1-216ENST00000473714 PPP1R14AQ96A00 147 aa3.13□□□□□ -1.91
CALD1-216ENST00000473714 LRRC3Q9BY71 257 aa3.13□□□□□ -1.91
CALD1-216ENST00000473714 TMX1Q9H3N1 280 aa3.13□□□□□ -1.91
CALD1-216ENST00000473714 LRP2BPQ9P2M1 347 aa3.13□□□□□ -1.91
CALD1-216ENST00000473714 EBF1Q9UH73 591 aa3.13□□□□□ -1.91
CALD1-216ENST00000473714 HACL1Q9UJ83 578 aa3.13□□□□□ -1.91
CALD1-216ENST00000473714 PRKAB1Q9Y478 270 aa3.13□□□□□ -1.91
CALD1-216ENST00000473714 SLC12A7Q9Y666 1083 aa3.13□□□□□ -1.91
CALD1-216ENST00000473714 EYSQ5T1H1 3165 aa3.13□□□□□ -1.91
CALD1-216ENST00000473714 PRUNE2Q8WUY3 3088 aa3.13□□□□□ -1.91
CALD1-216ENST00000473714 NSD2O96028 1365 aa3.12□□□□□ -1.91
CALD1-216ENST00000473714 CCDC7Q96M83 1385 aa3.12□□□□□ -1.91
CALD1-216ENST00000473714 CHD8Q9HCK8 2581 aa3.12□□□□□ -1.91
CALD1-216ENST00000473714 CENPFP49454 3210 aa3.12□□□□□ -1.91
CALD1-216ENST00000473714 MUC6Q6W4X9 2439 aa3.12□□□□□ -1.91
CALD1-216ENST00000473714 MYOM3Q5VTT5 1437 aa3.12□□□□□ -1.91
CALD1-216ENST00000473714 PPIP5K1Q6PFW1 1433 aa3.12□□□□□ -1.91
CALD1-216ENST00000473714 FER1L6Q2WGJ9 1857 aa3.12□□□□□ -1.91
CALD1-216ENST00000473714 ESYT3A0FGR9 886 aa3.12□□□□□ -1.91
CALD1-216ENST00000473714 FAM221AA4D161 298 aa3.12□□□□□ -1.91
CALD1-216ENST00000473714 NOTOA8MTQ0 251 aa3.12□□□□□ -1.91
CALD1-216ENST00000473714 ENPP3O14638 875 aa3.12□□□□□ -1.91
CALD1-216ENST00000473714 BUB1BO60566 1050 aaPredicted RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms