RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 ANKRD65E5RJM6 399 aa6.68□□□□□ -1.34
HERC4-209ENST00000473533 CYTH3O43739 400 aa6.68□□□□□ -1.34
HERC4-209ENST00000473533 C21orf2O43822 256 aa6.68□□□□□ -1.34
HERC4-209ENST00000473533 DNAJC8O75937 253 aaPredicted RBP6.68□□□□□ -1.34
HERC4-209ENST00000473533 GGPS1O95749 300 aa6.68□□□□□ -1.34
HERC4-209ENST00000473533 XRCC5P13010 732 aaKnown RBP6.68□□□□□ -1.34
HERC4-209ENST00000473533 RASA1P20936 1047 aa6.68□□□□□ -1.34
HERC4-209ENST00000473533 KCNMA1Q12791 1236 aa6.68□□□□□ -1.34
HERC4-209ENST00000473533 ADAM9Q13443 819 aa6.68□□□□□ -1.34
HERC4-209ENST00000473533 ITIH4Q14624 930 aa6.68□□□□□ -1.34
HERC4-209ENST00000473533 EXOC3L4Q17RC7 722 aa6.68□□□□□ -1.34
HERC4-209ENST00000473533 ERFEQ4G0M1 354 aa6.68□□□□□ -1.34
HERC4-209ENST00000473533 GPATCH4Q5T3I0 446 aaKnown RBP6.68□□□□□ -1.34
HERC4-209ENST00000473533 FBXW10Q5XX13 1052 aa6.68□□□□□ -1.34
HERC4-209ENST00000473533 MSL1Q68DK7 614 aa6.68□□□□□ -1.34
HERC4-209ENST00000473533 C6orf89Q6UWU4 347 aa6.68□□□□□ -1.34
HERC4-209ENST00000473533 TPTE2Q6XPS3 522 aa6.68□□□□□ -1.34
HERC4-209ENST00000473533 C15orf52Q6ZUT6 534 aaKnown RBP6.68□□□□□ -1.34
HERC4-209ENST00000473533 TAOK1Q7L7X3 1001 aa6.68□□□□□ -1.34
HERC4-209ENST00000473533 CCDC13Q8IYE1 715 aa6.68□□□□□ -1.34
HERC4-209ENST00000473533 ANKRD13CQ8N6S4 541 aa6.68□□□□□ -1.34
HERC4-209ENST00000473533 SGSM3Q96HU1 749 aa6.68□□□□□ -1.34
HERC4-209ENST00000473533 MOV10L1Q9BXT6 1211 aaKnown RBP6.68□□□□□ -1.34
HERC4-209ENST00000473533 DDX25Q9UHL0 483 aaKnown RBP6.68□□□□□ -1.34
HERC4-209ENST00000473533 PCDHA12Q9UN75 941 aa6.68□□□□□ -1.34
HERC4-209ENST00000473533 PNMA6FA0A0J9YX94 578 aa6.68□□□□□ -1.34
HERC4-209ENST00000473533 PDXKO00764 312 aa6.68□□□□□ -1.34
HERC4-209ENST00000473533 HPDP32754 393 aaPredicted RBP6.68□□□□□ -1.34
HERC4-209ENST00000473533 STAT1P42224 750 aa6.68□□□□□ -1.34
HERC4-209ENST00000473533 ADCY2Q08462 1091 aa6.68□□□□□ -1.34
HERC4-209ENST00000473533 KRT71Q3SY84 523 aa6.68□□□□□ -1.34
HERC4-209ENST00000473533 PREPLQ4J6C6 727 aaPredicted RBP6.68□□□□□ -1.34
HERC4-209ENST00000473533 ALKBH5Q6P6C2 394 aaKnown RBP6.68□□□□□ -1.34
HERC4-209ENST00000473533 SH2D3CQ8N5H7 860 aa6.68□□□□□ -1.34
HERC4-209ENST00000473533 GBP7Q8N8V2 638 aaPredicted RBP6.68□□□□□ -1.34
HERC4-209ENST00000473533 CCDC197Q8NCU1 140 aa6.68□□□□□ -1.34
HERC4-209ENST00000473533 MORC4Q8TE76 937 aa6.68□□□□□ -1.34
HERC4-209ENST00000473533 TBC1D22AQ8WUA7 517 aa6.68□□□□□ -1.34
HERC4-209ENST00000473533 KAT2BQ92831 832 aa6.68□□□□□ -1.34
HERC4-209ENST00000473533 EMILIN3Q9NT22 766 aa6.68□□□□□ -1.34
HERC4-209ENST00000473533 SAMD15Q9P1V8 674 aa6.68□□□□□ -1.34
HERC4-209ENST00000473533 BIN2Q9UBW5 565 aaPredicted RBP6.68□□□□□ -1.34
HERC4-209ENST00000473533 HDAC9Q9UKV0 1011 aa6.68□□□□□ -1.34
HERC4-209ENST00000473533 BHMG1C9JSJ3 638 aaPredicted RBP6.67□□□□□ -1.34
HERC4-209ENST00000473533 TBX3O15119 743 aa6.67□□□□□ -1.34
HERC4-209ENST00000473533 EPHB6O15197 1021 aa6.67□□□□□ -1.34
HERC4-209ENST00000473533 GAP43P17677 238 aa6.67□□□□□ -1.34
HERC4-209ENST00000473533 ERCC3P19447 782 aa6.67□□□□□ -1.34
HERC4-209ENST00000473533 PRDX5P30044 214 aa6.67□□□□□ -1.34
HERC4-209ENST00000473533 CDK8P49336 464 aa6.67□□□□□ -1.34
HERC4-209ENST00000473533 DRG2P55039 364 aaKnown RBP6.67□□□□□ -1.34
HERC4-209ENST00000473533 TRAF1Q13077 416 aa6.67□□□□□ -1.34
HERC4-209ENST00000473533 DDB1Q16531 1140 aa6.67□□□□□ -1.34
HERC4-209ENST00000473533 HERC4Q5GLZ8 1057 aaPredicted RBP6.67□□□□□ -1.34
HERC4-209ENST00000473533 PARP9Q8IXQ6 854 aa6.67□□□□□ -1.34
HERC4-209ENST00000473533 ZNF384Q8TF68 577 aa6.67□□□□□ -1.34
HERC4-209ENST00000473533 PIK3R5Q8WYR1 880 aa6.67□□□□□ -1.34
HERC4-209ENST00000473533 SEC14L1Q92503 715 aa6.67□□□□□ -1.34
HERC4-209ENST00000473533 MS4A14Q96JA4 679 aa6.67□□□□□ -1.34
HERC4-209ENST00000473533 GANQ9H2C0 597 aa6.67□□□□□ -1.34
HERC4-209ENST00000473533 PPANQ9NQ55 473 aaKnown RBP6.67□□□□□ -1.34
HERC4-209ENST00000473533 ADAMTS1Q9UHI8 967 aa6.67□□□□□ -1.34
HERC4-209ENST00000473533 TRAF3IP3Q9Y228 551 aa6.67□□□□□ -1.34
HERC4-209ENST00000473533 NOC2LQ9Y3T9 749 aaKnown RBP6.67□□□□□ -1.34
HERC4-209ENST00000473533 MIF4GDA9UHW6 222 aaKnown RBP6.67□□□□□ -1.34
HERC4-209ENST00000473533 PODXLO00592 558 aa6.67□□□□□ -1.34
HERC4-209ENST00000473533 ASAP2O43150 1006 aa6.67□□□□□ -1.34
HERC4-209ENST00000473533 RASSF9O75901 435 aa6.67□□□□□ -1.34
HERC4-209ENST00000473533 NOVP48745 357 aa6.67□□□□□ -1.34
HERC4-209ENST00000473533 HDLBPQ00341 1268 aaKnown RBP6.67□□□□□ -1.34
HERC4-209ENST00000473533 KCNH2Q12809 1159 aa6.67□□□□□ -1.34
HERC4-209ENST00000473533 C6orf118Q5T5N4 469 aa6.67□□□□□ -1.34
HERC4-209ENST00000473533 BTNL9Q6UXG8 535 aa6.67□□□□□ -1.34
HERC4-209ENST00000473533 SLFN11Q7Z7L1 901 aa6.67□□□□□ -1.34
HERC4-209ENST00000473533 GPATCH11Q8N954 259 aa6.67□□□□□ -1.34
HERC4-209ENST00000473533 FAM133AQ8N9E0 248 aa6.67□□□□□ -1.34
HERC4-209ENST00000473533 CHMP6Q96FZ7 201 aa6.67□□□□□ -1.34
HERC4-209ENST00000473533 SETDB2Q96T68 719 aa6.67□□□□□ -1.34
HERC4-209ENST00000473533 FMO2Q99518 471 aa6.67□□□□□ -1.34
HERC4-209ENST00000473533 CARD9Q9H257 536 aa6.67□□□□□ -1.34
HERC4-209ENST00000473533 SLC40A1Q9NP59 571 aa6.67□□□□□ -1.34
HERC4-209ENST00000473533 PFASO15067 1338 aa6.67□□□□□ -1.34
HERC4-209ENST00000473533 UBE4BO95155 1302 aa6.67□□□□□ -1.34
HERC4-209ENST00000473533 A0A087X0T9 212 aa6.67□□□□□ -1.34
HERC4-209ENST00000473533 USP17L3A6NCW0 530 aa6.67□□□□□ -1.34
HERC4-209ENST00000473533 USP17L4A6NCW7 530 aa6.67□□□□□ -1.34
HERC4-209ENST00000473533 NOL4O94818 638 aa6.67□□□□□ -1.34
HERC4-209ENST00000473533 SSBP05455 408 aaKnown RBP eCLIP6.67□□□□□ -1.34
HERC4-209ENST00000473533 FAM153BP0C7A2 387 aa6.67□□□□□ -1.34
HERC4-209ENST00000473533 PLA2G4BP0C869 781 aa6.67□□□□□ -1.34
HERC4-209ENST00000473533 FAM228BP0C875 321 aa6.67□□□□□ -1.34
HERC4-209ENST00000473533 VEGFAP15692 232 aaPredicted RBP6.67□□□□□ -1.34
HERC4-209ENST00000473533 TNNI2P48788 182 aa6.67□□□□□ -1.34
HERC4-209ENST00000473533 ERVK-9P63128 1117 aa6.67□□□□□ -1.34
HERC4-209ENST00000473533 ZNF844Q08AG5 666 aa6.67□□□□□ -1.34
HERC4-209ENST00000473533 AP3B2Q13367 1082 aa6.67□□□□□ -1.34
HERC4-209ENST00000473533 FAM153CQ494X1 144 aa6.67□□□□□ -1.34
HERC4-209ENST00000473533 DENND2CQ68D51 928 aa6.67□□□□□ -1.34
HERC4-209ENST00000473533 TTC19Q6DKK2 380 aaPredicted RBP6.67□□□□□ -1.34
HERC4-209ENST00000473533 KCNV1Q6PIU1 500 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms