RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 GRIK4Q16099 956 aa9.26□□□□□ -0.93
USP48-207ENST00000471752 RTN1Q16799 776 aa9.26□□□□□ -0.93
USP48-207ENST00000471752 GNPTABQ3T906 1256 aa9.26□□□□□ -0.93
USP48-207ENST00000471752 NLRX1Q86UT6 975 aa9.26□□□□□ -0.93
USP48-207ENST00000471752 ATXN2LQ8WWM7 1075 aaKnown RBP9.26□□□□□ -0.93
USP48-207ENST00000471752 SEPT1Q8WYJ6 367 aa9.26□□□□□ -0.93
USP48-207ENST00000471752 BRF1Q92994 677 aa9.26□□□□□ -0.93
USP48-207ENST00000471752 PHKBQ93100 1093 aa9.26□□□□□ -0.93
USP48-207ENST00000471752 GJA10Q969M2 543 aa9.26□□□□□ -0.93
USP48-207ENST00000471752 GPRASP2Q96D09 838 aa9.26□□□□□ -0.93
USP48-207ENST00000471752 MXRA8Q9BRK3 442 aa9.26□□□□□ -0.93
USP48-207ENST00000471752 ANO3Q9BYT9 981 aa9.26□□□□□ -0.93
USP48-207ENST00000471752 FAM49AQ9H0Q0 323 aaPredicted RBP9.26□□□□□ -0.93
USP48-207ENST00000471752 NCOA5Q9HCD5 579 aaKnown RBP9.26□□□□□ -0.93
USP48-207ENST00000471752 RIC8AQ9NPQ8 531 aa9.26□□□□□ -0.93
USP48-207ENST00000471752 NAP1L2Q9ULW6 460 aaPredicted RBP9.26□□□□□ -0.93
USP48-207ENST00000471752 KIF28PB7ZC32 967 aa9.25□□□□□ -0.93
USP48-207ENST00000471752 MEIS1O00470 390 aa9.25□□□□□ -0.93
USP48-207ENST00000471752 ENPP3O14638 875 aa9.25□□□□□ -0.93
USP48-207ENST00000471752 STAM2O75886 525 aa9.25□□□□□ -0.93
USP48-207ENST00000471752 CALM1P0DP23 149 aa9.25□□□□□ -0.93
USP48-207ENST00000471752 CALM2P0DP24 149 aa9.25□□□□□ -0.93
USP48-207ENST00000471752 CALM3P0DP25 149 aa9.25□□□□□ -0.93
USP48-207ENST00000471752 CLK2P49760 499 aaKnown RBP9.25□□□□□ -0.93
USP48-207ENST00000471752 GATMP50440 423 aa9.25□□□□□ -0.93
USP48-207ENST00000471752 ACTR2P61160 394 aa9.25□□□□□ -0.93
USP48-207ENST00000471752 TRAF1Q13077 416 aa9.25□□□□□ -0.93
USP48-207ENST00000471752 PPFIA1Q13136 1202 aa9.25□□□□□ -0.93
USP48-207ENST00000471752 MTMR1Q13613 665 aa9.25□□□□□ -0.93
USP48-207ENST00000471752 NTRK3Q16288 839 aa9.25□□□□□ -0.93
USP48-207ENST00000471752 FAM26DQ5JW98 314 aa9.25□□□□□ -0.93
USP48-207ENST00000471752 XRRA1Q6P2D8 792 aa9.25□□□□□ -0.93
USP48-207ENST00000471752 CRYGNQ8WXF5 182 aa9.25□□□□□ -0.93
USP48-207ENST00000471752 GLG1Q92896 1179 aa9.25□□□□□ -0.93
USP48-207ENST00000471752 TOP1MTQ969P6 601 aa9.25□□□□□ -0.93
USP48-207ENST00000471752 JAKMIP1Q96N16 626 aaKnown RBP9.25□□□□□ -0.93
USP48-207ENST00000471752 EHMT1Q9H9B1 1298 aa9.25□□□□□ -0.93
USP48-207ENST00000471752 AGO4Q9HCK5 861 aaKnown RBP9.25□□□□□ -0.93
USP48-207ENST00000471752 BARHL2Q9NY43 387 aa9.25□□□□□ -0.93
USP48-207ENST00000471752 WDR87Q6ZQQ6 2873 aa9.25□□□□□ -0.93
USP48-207ENST00000471752 TANC1Q9C0D5 1861 aa9.24□□□□□ -0.93
USP48-207ENST00000471752 IGLV3-22A0A075B6J6 115 aa9.24□□□□□ -0.93
USP48-207ENST00000471752 MBLAC1A4D2B0 266 aaPredicted RBP9.24□□□□□ -0.93
USP48-207ENST00000471752 SPDYE3A6NKU9 549 aa9.24□□□□□ -0.93
USP48-207ENST00000471752 ZBTB42B2RXF5 422 aa9.24□□□□□ -0.93
USP48-207ENST00000471752 TNFRSF10AO00220 468 aa9.24□□□□□ -0.93
USP48-207ENST00000471752 CSPG5O95196 566 aa9.24□□□□□ -0.93
USP48-207ENST00000471752 CD52P31358 61 aa9.24□□□□□ -0.93
USP48-207ENST00000471752 HSPA4P34932 840 aa9.24□□□□□ -0.93
USP48-207ENST00000471752 CCT2P78371 535 aaKnown RBP9.24□□□□□ -0.93
USP48-207ENST00000471752 TMEM266Q2M3C6 531 aa9.24□□□□□ -0.93
USP48-207ENST00000471752 EPC2Q52LR7 807 aa9.24□□□□□ -0.93
USP48-207ENST00000471752 CEP55Q53EZ4 464 aa9.24□□□□□ -0.93
USP48-207ENST00000471752 FBXO47Q5MNV8 452 aa9.24□□□□□ -0.93
USP48-207ENST00000471752 TRMT1LQ7Z2T5 733 aaKnown RBP9.24□□□□□ -0.93
USP48-207ENST00000471752 ZNF579Q8NAF0 562 aaKnown RBP9.24□□□□□ -0.93
USP48-207ENST00000471752 TGS1Q96RS0 853 aaKnown RBP9.24□□□□□ -0.93
USP48-207ENST00000471752 PPP1R16BQ96T49 567 aa9.24□□□□□ -0.93
USP48-207ENST00000471752 UHRF1Q96T88 793 aaPredicted RBP9.24□□□□□ -0.93
USP48-207ENST00000471752 EPHX3Q9H6B9 360 aa9.24□□□□□ -0.93
USP48-207ENST00000471752 SLC9A2Q9UBY0 812 aa9.24□□□□□ -0.93
USP48-207ENST00000471752 CDY2AQ9Y6F7 541 aa9.24□□□□□ -0.93
USP48-207ENST00000471752 MGEA5O60502 916 aa9.23□□□□□ -0.93
USP48-207ENST00000471752 ATG7O95352 703 aa9.23□□□□□ -0.93
USP48-207ENST00000471752 IBSPP21815 317 aaPredicted RBP9.23□□□□□ -0.93
USP48-207ENST00000471752 GTF2F1P35269 517 aaKnown RBP eCLIP9.23□□□□□ -0.93
USP48-207ENST00000471752 ADCY7P51828 1080 aa9.23□□□□□ -0.93
USP48-207ENST00000471752 TOB2Q14106 344 aaPredicted RBP9.23□□□□□ -0.93
USP48-207ENST00000471752 PFKFB3Q16875 520 aaPredicted RBP9.23□□□□□ -0.93
USP48-207ENST00000471752 ABHD15Q6UXT9 468 aa9.23□□□□□ -0.93
USP48-207ENST00000471752 SYNE3Q6ZMZ3 975 aa9.23□□□□□ -0.93
USP48-207ENST00000471752 CCDC60Q8IWA6 550 aaPredicted RBP9.23□□□□□ -0.93
USP48-207ENST00000471752 CRIPAKQ8N1N5 446 aa9.23□□□□□ -0.93
USP48-207ENST00000471752 SEPT8Q92599 483 aa9.23□□□□□ -0.93
USP48-207ENST00000471752 ZNF668Q96K58 619 aaPredicted RBP9.23□□□□□ -0.93
USP48-207ENST00000471752 AIFM3Q96NN9 605 aa9.23□□□□□ -0.93
USP48-207ENST00000471752 IFIH1Q9BYX4 1025 aaKnown RBP9.23□□□□□ -0.93
USP48-207ENST00000471752 TMX1Q9H3N1 280 aa9.23□□□□□ -0.93
USP48-207ENST00000471752 JPH1Q9HDC5 661 aaPredicted RBP9.23□□□□□ -0.93
USP48-207ENST00000471752 HCSTQ9UBK5 93 aa9.23□□□□□ -0.93
USP48-207ENST00000471752 INSL6Q9Y581 213 aa9.23□□□□□ -0.93
USP48-207ENST00000471752 NRCAMQ92823 1304 aa9.23□□□□□ -0.93
USP48-207ENST00000471752 WDFY4Q6ZS81 3184 aa9.22□□□□□ -0.93
USP48-207ENST00000471752 IGKV6D-21A0A0A0MT36 114 aa9.22□□□□□ -0.93
USP48-207ENST00000471752 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.22□□□□□ -0.93
USP48-207ENST00000471752 GRM6O15303 877 aa9.22□□□□□ -0.93
USP48-207ENST00000471752 GTPBP6O43824 516 aaPredicted RBP9.22□□□□□ -0.93
USP48-207ENST00000471752 PARNO95453 639 aaKnown RBP9.22□□□□□ -0.93
USP48-207ENST00000471752 AMHP03971 560 aa9.22□□□□□ -0.93
USP48-207ENST00000471752 SCG2P13521 617 aa9.22□□□□□ -0.93
USP48-207ENST00000471752 RPS6KB1P23443 525 aa9.22□□□□□ -0.93
USP48-207ENST00000471752 DNAJB1P25685 340 aa9.22□□□□□ -0.93
USP48-207ENST00000471752 PDIA3P30101 505 aaKnown RBP9.22□□□□□ -0.93
USP48-207ENST00000471752 SREBF1P36956 1147 aa9.22□□□□□ -0.93
USP48-207ENST00000471752 METAP2P50579 478 aaKnown RBP eCLIP9.22□□□□□ -0.93
USP48-207ENST00000471752 STAT5BP51692 787 aa9.22□□□□□ -0.93
USP48-207ENST00000471752 CAMK1Q14012 370 aa9.22□□□□□ -0.93
USP48-207ENST00000471752 RNF20Q5VTR2 975 aa9.22□□□□□ -0.93
USP48-207ENST00000471752 SWSAP1Q6NVH7 229 aa9.22□□□□□ -0.93
USP48-207ENST00000471752 PLA2G4DQ86XP0 818 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms