RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 LENG9Q96B70 501 aa19.52■□□□□ 0.72
HSPG2-208ENST00000471322 PNMA5Q96PV4 448 aa19.52■□□□□ 0.72
HSPG2-208ENST00000471322 SYNGAP1Q96PV0 1343 aa19.52■□□□□ 0.71
HSPG2-208ENST00000471322 MYCNP04198 464 aaPredicted RBP19.51■□□□□ 0.71
HSPG2-208ENST00000471322 MSNP26038 577 aaKnown RBP19.51■□□□□ 0.71
HSPG2-208ENST00000471322 HAUS3Q68CZ6 603 aa19.51■□□□□ 0.71
HSPG2-208ENST00000471322 KCTD17Q8N5Z5 321 aa19.51■□□□□ 0.71
HSPG2-208ENST00000471322 MAF1Q9H063 256 aa19.51■□□□□ 0.71
HSPG2-208ENST00000471322 ZKSCAN5Q9Y2L8 839 aa19.51■□□□□ 0.71
HSPG2-208ENST00000471322 PPP1R3GB7ZBB8 358 aa19.51■□□□□ 0.71
HSPG2-208ENST00000471322 RHOBTB3O94955 611 aa19.51■□□□□ 0.71
HSPG2-208ENST00000471322 ZNF865P0CJ78 1059 aaPredicted RBP19.51■□□□□ 0.71
HSPG2-208ENST00000471322 EIF2AK2P19525 551 aaKnown RBP19.51■□□□□ 0.71
HSPG2-208ENST00000471322 CCT6AP40227 531 aaKnown RBP19.51■□□□□ 0.71
HSPG2-208ENST00000471322 PPP1R2P41236 205 aa19.51■□□□□ 0.71
HSPG2-208ENST00000471322 ACVR2BQ13705 512 aa19.51■□□□□ 0.71
HSPG2-208ENST00000471322 SPATA1Q5VX52 437 aa19.51■□□□□ 0.71
HSPG2-208ENST00000471322 LHX8Q68G74 356 aa19.51■□□□□ 0.71
HSPG2-208ENST00000471322 FBXO16Q8IX29 292 aaPredicted RBP19.51■□□□□ 0.71
HSPG2-208ENST00000471322 LARP4BQ92615 738 aaKnown RBP19.51■□□□□ 0.71
HSPG2-208ENST00000471322 RAD54LQ92698 747 aa19.51■□□□□ 0.71
HSPG2-208ENST00000471322 RMDN3Q96TC7 470 aa19.51■□□□□ 0.71
HSPG2-208ENST00000471322 TRIM9Q9C026 710 aa19.51■□□□□ 0.71
HSPG2-208ENST00000471322 ADD3Q9UEY8 706 aaKnown RBP19.51■□□□□ 0.71
HSPG2-208ENST00000471322 ASB14A6NK59 587 aa19.5■□□□□ 0.71
HSPG2-208ENST00000471322 MSH4O15457 936 aa19.5■□□□□ 0.71
HSPG2-208ENST00000471322 PTGS1P23219 599 aa19.5■□□□□ 0.71
HSPG2-208ENST00000471322 FANCCQ00597 558 aa19.5■□□□□ 0.71
HSPG2-208ENST00000471322 SETQ01105 290 aaPredicted RBP19.5■□□□□ 0.71
HSPG2-208ENST00000471322 STIM1Q13586 685 aa19.5■□□□□ 0.71
HSPG2-208ENST00000471322 CEP55Q53EZ4 464 aa19.5■□□□□ 0.71
HSPG2-208ENST00000471322 CNNM4Q6P4Q7 775 aa19.5■□□□□ 0.71
HSPG2-208ENST00000471322 MSL3Q8N5Y2 521 aaKnown RBP19.5■□□□□ 0.71
HSPG2-208ENST00000471322 SPC24Q8NBT2 197 aa19.5■□□□□ 0.71
HSPG2-208ENST00000471322 HSD3B7Q9H2F3 369 aa19.5■□□□□ 0.71
HSPG2-208ENST00000471322 BLOC1S4Q9NUP1 217 aa19.5■□□□□ 0.71
HSPG2-208ENST00000471322 FANCLQ9NW38 375 aa19.5■□□□□ 0.71
HSPG2-208ENST00000471322 DDX20Q9UHI6 824 aaKnown RBP19.5■□□□□ 0.71
HSPG2-208ENST00000471322 NFE2L3Q9Y4A8 694 aa19.5■□□□□ 0.71
HSPG2-208ENST00000471322 MYH7BA7E2Y1 1941 aa19.49■□□□□ 0.71
HSPG2-208ENST00000471322 IGLV3-22A0A075B6J6 115 aa19.49■□□□□ 0.71
HSPG2-208ENST00000471322 PVALEFA0A1B0GWK0 134 aa19.49■□□□□ 0.71
HSPG2-208ENST00000471322 SEPT4O43236 478 aa19.49■□□□□ 0.71
HSPG2-208ENST00000471322 DHX8Q14562 1220 aaKnown RBP19.49■□□□□ 0.71
HSPG2-208ENST00000471322 KMT5BQ4FZB7 885 aa19.49■□□□□ 0.71
HSPG2-208ENST00000471322 ABHD16BQ9H3Z7 469 aa19.49■□□□□ 0.71
HSPG2-208ENST00000471322 PDGFCQ9NRA1 345 aa19.49■□□□□ 0.71
HSPG2-208ENST00000471322 RWDD2AQ9UIY3 292 aa19.49■□□□□ 0.71
HSPG2-208ENST00000471322 KLRC4O43908 158 aa19.48■□□□□ 0.71
HSPG2-208ENST00000471322 SERPINC1P01008 464 aa19.48■□□□□ 0.71
HSPG2-208ENST00000471322 CCDC144BQ3MJ40 725 aa19.48■□□□□ 0.71
HSPG2-208ENST00000471322 TMEM63BQ5T3F8 832 aa19.48■□□□□ 0.71
HSPG2-208ENST00000471322 ARHGEF16Q5VV41 709 aa19.48■□□□□ 0.71
HSPG2-208ENST00000471322 LRRC15Q8TF66 581 aa19.48■□□□□ 0.71
HSPG2-208ENST00000471322 ZFP91Q96JP5 570 aaPredicted RBP19.48■□□□□ 0.71
HSPG2-208ENST00000471322 KATNBL1Q9H079 304 aa19.48■□□□□ 0.71
HSPG2-208ENST00000471322 BMP2KQ9NSY1 1161 aaPredicted RBP19.48■□□□□ 0.71
HSPG2-208ENST00000471322 EXOC1Q9NV70 894 aa19.48■□□□□ 0.71
HSPG2-208ENST00000471322 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.47■□□□□ 0.71
HSPG2-208ENST00000471322 MEIS1O00470 390 aa19.47■□□□□ 0.71
HSPG2-208ENST00000471322 ADCY6O43306 1168 aa19.47■□□□□ 0.71
HSPG2-208ENST00000471322 CD44P16070 742 aaKnown RBP19.47■□□□□ 0.71
HSPG2-208ENST00000471322 ZNF18P17022 549 aa19.47■□□□□ 0.71
HSPG2-208ENST00000471322 CDK11BP21127 795 aaKnown RBP19.47■□□□□ 0.71
HSPG2-208ENST00000471322 ADCYAP1R1P41586 468 aa19.47■□□□□ 0.71
HSPG2-208ENST00000471322 ASIC1P78348 528 aa19.47■□□□□ 0.71
HSPG2-208ENST00000471322 PDE4DQ08499 809 aa19.47■□□□□ 0.71
HSPG2-208ENST00000471322 SPIRE1Q08AE8 756 aa19.47■□□□□ 0.71
HSPG2-208ENST00000471322 PAK1Q13153 545 aa19.47■□□□□ 0.71
HSPG2-208ENST00000471322 KLHL10Q6JEL2 608 aa19.47■□□□□ 0.71
HSPG2-208ENST00000471322 NIPA1Q7RTP0 329 aa19.47■□□□□ 0.71
HSPG2-208ENST00000471322 GIMAP8Q8ND71 665 aaPredicted RBP19.47■□□□□ 0.71
HSPG2-208ENST00000471322 DNERQ8NFT8 737 aa19.47■□□□□ 0.71
HSPG2-208ENST00000471322 NSUN6Q8TEA1 469 aaKnown RBP19.47■□□□□ 0.71
HSPG2-208ENST00000471322 DIS3LQ8TF46 1054 aaKnown RBP19.47■□□□□ 0.71
HSPG2-208ENST00000471322 CRISPLD2Q9H0B8 497 aa19.47■□□□□ 0.71
HSPG2-208ENST00000471322 IFNKQ9P0W0 207 aa19.47■□□□□ 0.71
HSPG2-208ENST00000471322 IMPACTQ9P2X3 320 aa19.47■□□□□ 0.71
HSPG2-208ENST00000471322 RBBP6Q7Z6E9 1792 aaKnown RBP19.47■□□□□ 0.71
HSPG2-208ENST00000471322 SYNRGQ9UMZ2 1314 aa19.47■□□□□ 0.71
HSPG2-208ENST00000471322 RPA1P27694 616 aa19.47■□□□□ 0.71
HSPG2-208ENST00000471322 UBASH3AP57075 661 aa19.47■□□□□ 0.71
HSPG2-208ENST00000471322 SLC5A5Q92911 643 aa19.47■□□□□ 0.71
HSPG2-208ENST00000471322 GJA10Q969M2 543 aa19.47■□□□□ 0.71
HSPG2-208ENST00000471322 XPO4Q9C0E2 1151 aaKnown RBP19.47■□□□□ 0.71
HSPG2-208ENST00000471322 PXMP2Q9NR77 195 aa19.47■□□□□ 0.71
HSPG2-208ENST00000471322 PGK1P00558 417 aa19.46■□□□□ 0.71
HSPG2-208ENST00000471322 AKR1A1P14550 325 aa19.46■□□□□ 0.71
HSPG2-208ENST00000471322 IRX5P78411 483 aaPredicted RBP19.46■□□□□ 0.71
HSPG2-208ENST00000471322 MCM6Q14566 821 aa19.46■□□□□ 0.71
HSPG2-208ENST00000471322 GJC2Q5T442 439 aaPredicted RBP19.46■□□□□ 0.71
HSPG2-208ENST00000471322 UNC13DQ70J99 1090 aa19.46■□□□□ 0.71
HSPG2-208ENST00000471322 ADSSL1Q8N142 457 aa19.46■□□□□ 0.71
HSPG2-208ENST00000471322 IL31RAQ8NI17 732 aa19.46■□□□□ 0.71
HSPG2-208ENST00000471322 CYP2W1Q8TAV3 490 aa19.46■□□□□ 0.71
HSPG2-208ENST00000471322 MXRA8Q9BRK3 442 aa19.46■□□□□ 0.71
HSPG2-208ENST00000471322 POLR3CQ9BUI4 534 aaPredicted RBP19.46■□□□□ 0.71
HSPG2-208ENST00000471322 NRBP1Q9UHY1 535 aa19.46■□□□□ 0.71
HSPG2-208ENST00000471322 VAV3Q9UKW4 847 aa19.46■□□□□ 0.71
HSPG2-208ENST00000471322 OGDHLQ9ULD0 1010 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms