RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 NRLP54845 237 aa6.95□□□□□ -1.3
SMNDC1-204ENST00000471297 ZNF445P59923 1031 aa6.95□□□□□ -1.3
SMNDC1-204ENST00000471297 GPLD1P80108 840 aa6.95□□□□□ -1.3
SMNDC1-204ENST00000471297 PLCB3Q01970 1234 aa6.95□□□□□ -1.3
SMNDC1-204ENST00000471297 KLRC3Q07444 240 aa6.95□□□□□ -1.3
SMNDC1-204ENST00000471297 SLC39A14Q15043 492 aa6.95□□□□□ -1.3
SMNDC1-204ENST00000471297 CCDC96Q2M329 555 aa6.95□□□□□ -1.3
SMNDC1-204ENST00000471297 CCDC183Q5T5S1 534 aa6.95□□□□□ -1.3
SMNDC1-204ENST00000471297 ADALQ6DHV7 355 aa6.95□□□□□ -1.3
SMNDC1-204ENST00000471297 TMC7Q7Z402 723 aa6.95□□□□□ -1.3
SMNDC1-204ENST00000471297 SIAH1Q8IUQ4 282 aa6.95□□□□□ -1.3
SMNDC1-204ENST00000471297 BLIDQ8IZY5 108 aa6.95□□□□□ -1.3
SMNDC1-204ENST00000471297 LRRC47Q8N1G4 583 aaKnown RBP6.95□□□□□ -1.3
SMNDC1-204ENST00000471297 BICD2Q8TD16 824 aa6.95□□□□□ -1.3
SMNDC1-204ENST00000471297 MTMR8Q96EF0 704 aa6.95□□□□□ -1.3
SMNDC1-204ENST00000471297 DMRTB1Q96MA1 342 aa6.95□□□□□ -1.3
SMNDC1-204ENST00000471297 TEPSINQ96N21 525 aa6.95□□□□□ -1.3
SMNDC1-204ENST00000471297 TMEM39BQ9GZU3 492 aa6.95□□□□□ -1.3
SMNDC1-204ENST00000471297 GLT8D2Q9H1C3 349 aa6.95□□□□□ -1.3
SMNDC1-204ENST00000471297 C6orf50Q9HD87 102 aa6.95□□□□□ -1.3
SMNDC1-204ENST00000471297 BARHL2Q9NY43 387 aa6.95□□□□□ -1.3
SMNDC1-204ENST00000471297 FOXD3Q9UJU5 478 aaPredicted RBP6.95□□□□□ -1.3
SMNDC1-204ENST00000471297 PCDHA4Q9UN74 947 aa6.95□□□□□ -1.3
SMNDC1-204ENST00000471297 SLC6A14Q9UN76 642 aa6.95□□□□□ -1.3
SMNDC1-204ENST00000471297 TMX2Q9Y320 296 aa6.95□□□□□ -1.3
SMNDC1-204ENST00000471297 CLIC4Q9Y696 253 aa6.95□□□□□ -1.3
SMNDC1-204ENST00000471297 PITPNM2Q9BZ72 1349 aa6.95□□□□□ -1.3
SMNDC1-204ENST00000471297 PNMA6FA0A0J9YX94 578 aa6.94□□□□□ -1.3
SMNDC1-204ENST00000471297 hCG_1642624A0A1W2PR95 340 aa6.94□□□□□ -1.3
SMNDC1-204ENST00000471297 ESYT2A0FGR8 921 aa6.94□□□□□ -1.3
SMNDC1-204ENST00000471297 PHF20L1A8MW92 1017 aa6.94□□□□□ -1.3
SMNDC1-204ENST00000471297 STXBP3O00186 592 aa6.94□□□□□ -1.3
SMNDC1-204ENST00000471297 PLA2G6O60733 806 aa6.94□□□□□ -1.3
SMNDC1-204ENST00000471297 PHACTR2O75167 634 aa6.94□□□□□ -1.3
SMNDC1-204ENST00000471297 CPB1P15086 417 aa6.94□□□□□ -1.3
SMNDC1-204ENST00000471297 YBX3P16989 372 aaKnown RBP eCLIP6.94□□□□□ -1.3
SMNDC1-204ENST00000471297 ME1P48163 572 aa6.94□□□□□ -1.3
SMNDC1-204ENST00000471297 CEBPZQ03701 1054 aaKnown RBP6.94□□□□□ -1.3
SMNDC1-204ENST00000471297 HYAL2Q12891 473 aa6.94□□□□□ -1.3
SMNDC1-204ENST00000471297 TRAF1Q13077 416 aa6.94□□□□□ -1.3
SMNDC1-204ENST00000471297 RRP1BQ14684 758 aaKnown RBP6.94□□□□□ -1.3
SMNDC1-204ENST00000471297 PTPAQ15257 358 aa6.94□□□□□ -1.3
SMNDC1-204ENST00000471297 SLC35G1Q2M3R5 365 aa6.94□□□□□ -1.3
SMNDC1-204ENST00000471297 ZSCAN23Q3MJ62 389 aa6.94□□□□□ -1.3
SMNDC1-204ENST00000471297 L1TD1Q5T7N2 865 aaKnown RBP6.94□□□□□ -1.3
SMNDC1-204ENST00000471297 C9orf131Q5VYM1 1079 aa6.94□□□□□ -1.3
SMNDC1-204ENST00000471297 WWC2Q6AWC2 1192 aa6.94□□□□□ -1.3
SMNDC1-204ENST00000471297 BTNL9Q6UXG8 535 aa6.94□□□□□ -1.3
SMNDC1-204ENST00000471297 CHSY3Q70JA7 882 aa6.94□□□□□ -1.3
SMNDC1-204ENST00000471297 MIGA2Q7L4E1 593 aa6.94□□□□□ -1.3
SMNDC1-204ENST00000471297 FAM35AQ86V20 835 aa6.94□□□□□ -1.3
SMNDC1-204ENST00000471297 ADGRF4Q8IZF3 695 aa6.94□□□□□ -1.3
SMNDC1-204ENST00000471297 PGBD1Q96JS3 809 aa6.94□□□□□ -1.3
SMNDC1-204ENST00000471297 ZNF341Q9BYN7 854 aa6.94□□□□□ -1.3
SMNDC1-204ENST00000471297 UBA5Q9GZZ9 404 aa6.94□□□□□ -1.3
SMNDC1-204ENST00000471297 ZMYND12Q9H0C1 365 aa6.94□□□□□ -1.3
SMNDC1-204ENST00000471297 DEFB129Q9H1M3 183 aa6.94□□□□□ -1.3
SMNDC1-204ENST00000471297 ZFYVE28Q9HCC9 887 aa6.94□□□□□ -1.3
SMNDC1-204ENST00000471297 VAT1LQ9HCJ6 419 aa6.94□□□□□ -1.3
SMNDC1-204ENST00000471297 ADARB2Q9NS39 739 aaKnown RBP6.94□□□□□ -1.3
SMNDC1-204ENST00000471297 DDX19AQ9NUU7 478 aaKnown RBP6.94□□□□□ -1.3
SMNDC1-204ENST00000471297 ZNF112Q9UJU3 913 aa6.94□□□□□ -1.3
SMNDC1-204ENST00000471297 ZBTB21Q9ULJ3 1066 aa6.94□□□□□ -1.3
SMNDC1-204ENST00000471297 PCDHA7Q9UN72 937 aa6.94□□□□□ -1.3
SMNDC1-204ENST00000471297 FRMPD2Q68DX3 1309 aaPredicted RBP6.94□□□□□ -1.3
SMNDC1-204ENST00000471297 SIPA1L1O43166 1804 aa6.93□□□□□ -1.3
SMNDC1-204ENST00000471297 CCDC194A0A1B0GVG4 234 aa6.93□□□□□ -1.3
SMNDC1-204ENST00000471297 GOLGA6L3A6NEY3 463 aa6.93□□□□□ -1.3
SMNDC1-204ENST00000471297 SMCO2A6NFE2 343 aa6.93□□□□□ -1.3
SMNDC1-204ENST00000471297 TRIM75PA6NK02 468 aa6.93□□□□□ -1.3
SMNDC1-204ENST00000471297 ZBTB5O15062 677 aa6.93□□□□□ -1.3
SMNDC1-204ENST00000471297 GPR182O15218 404 aa6.93□□□□□ -1.3
SMNDC1-204ENST00000471297 CUTAO60888 179 aa6.93□□□□□ -1.3
SMNDC1-204ENST00000471297 DDNO94850 711 aaPredicted RBP6.93□□□□□ -1.3
SMNDC1-204ENST00000471297 NDUFB10O96000 172 aa6.93□□□□□ -1.3
SMNDC1-204ENST00000471297 BMP3P12645 472 aa6.93□□□□□ -1.3
SMNDC1-204ENST00000471297 CMA1P23946 247 aa6.93□□□□□ -1.3
SMNDC1-204ENST00000471297 EPS15P42566 896 aa6.93□□□□□ -1.3
SMNDC1-204ENST00000471297 TOB1P50616 345 aaPredicted RBP6.93□□□□□ -1.3
SMNDC1-204ENST00000471297 NAPAP54920 295 aa6.93□□□□□ -1.3
SMNDC1-204ENST00000471297 JAG1P78504 1218 aa6.93□□□□□ -1.3
SMNDC1-204ENST00000471297 NPY5RQ15761 445 aa6.93□□□□□ -1.3
SMNDC1-204ENST00000471297 GPR162Q16538 588 aa6.93□□□□□ -1.3
SMNDC1-204ENST00000471297 SUPT20HL1Q3ZLR7 823 aa6.93□□□□□ -1.3
SMNDC1-204ENST00000471297 COL13A1Q5TAT6 717 aaPredicted RBP6.93□□□□□ -1.3
SMNDC1-204ENST00000471297 ANGEL2Q5VTE6 544 aaKnown RBP6.93□□□□□ -1.3
SMNDC1-204ENST00000471297 MCTP2Q6DN12 878 aa6.93□□□□□ -1.3
SMNDC1-204ENST00000471297 TTBK2Q6IQ55 1244 aa6.93□□□□□ -1.3
SMNDC1-204ENST00000471297 CCDC73Q6ZRK6 1079 aa6.93□□□□□ -1.3
SMNDC1-204ENST00000471297 KCTD1Q719H9 257 aa6.93□□□□□ -1.3
SMNDC1-204ENST00000471297 HEATR3Q7Z4Q2 680 aa6.93□□□□□ -1.3
SMNDC1-204ENST00000471297 FAM160B2Q86V87 743 aa6.93□□□□□ -1.3
SMNDC1-204ENST00000471297 CLEC10AQ8IUN9 316 aa6.93□□□□□ -1.3
SMNDC1-204ENST00000471297 TEX2Q8IWB9 1127 aa6.93□□□□□ -1.3
SMNDC1-204ENST00000471297 CCAR1Q8IX12 1150 aaKnown RBP6.93□□□□□ -1.3
SMNDC1-204ENST00000471297 SNX29Q8TEQ0 813 aa6.93□□□□□ -1.3
SMNDC1-204ENST00000471297 CHURC1Q8WUH1 139 aa6.93□□□□□ -1.3
SMNDC1-204ENST00000471297 PIBF1Q8WXW3 757 aa6.93□□□□□ -1.3
SMNDC1-204ENST00000471297 MRPS27Q92552 414 aaKnown RBP6.93□□□□□ -1.3
SMNDC1-204ENST00000471297 SHISA4Q96DD7 197 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms