RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, human

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1-208	ENST00000471250	CACNB1	Q02641	598 aa	Predicted RBP	28.86	■■■□□ 2.21
U2AF1-208	ENST00000471250	KCTD2	Q14681	263 aa		28.86	■■■□□ 2.21
U2AF1-208	ENST00000471250	FAM26F	Q5R3K3	315 aa		28.86	■■■□□ 2.21
U2AF1-208	ENST00000471250	TTI2	Q6NXR4	508 aa		28.86	■■■□□ 2.21
U2AF1-208	ENST00000471250	RUSC1	Q9BVN2	902 aa		28.86	■■■□□ 2.21
U2AF1-208	ENST00000471250	PCDHA2	Q9Y5H9	948 aa		28.86	■■■□□ 2.21
U2AF1-208	ENST00000471250	DNAJC25-GNG10	A0A024R161	153 aa		28.85	■■■□□ 2.21
U2AF1-208	ENST00000471250		B4DLN1	442 aa		28.85	■■■□□ 2.21
U2AF1-208	ENST00000471250	QARS	P47897	775 aa	Known RBP	28.85	■■■□□ 2.21
U2AF1-208	ENST00000471250	GCLC	P48506	637 aa	Predicted RBP	28.85	■■■□□ 2.21
U2AF1-208	ENST00000471250	FAM43A	Q8N2R8	423 aa		28.85	■■■□□ 2.21
U2AF1-208	ENST00000471250	NAP1L5	Q96NT1	182 aa	Predicted RBP	28.85	■■■□□ 2.21
U2AF1-208	ENST00000471250	REEP2	Q9BRK0	252 aa		28.85	■■■□□ 2.21
U2AF1-208	ENST00000471250	ZBTB39	O15060	712 aa		28.84	■■■□□ 2.21
U2AF1-208	ENST00000471250	CCNA1	P78396	465 aa		28.84	■■■□□ 2.21
U2AF1-208	ENST00000471250	RAD51AP2	Q09MP3	1159 aa		28.84	■■■□□ 2.21
U2AF1-208	ENST00000471250	HERC4	Q5GLZ8	1057 aa	Predicted RBP	28.84	■■■□□ 2.21
U2AF1-208	ENST00000471250	C1orf186	Q6ZWK4	172 aa		28.84	■■■□□ 2.21
U2AF1-208	ENST00000471250	LRRC37A2	A6NM11	1700 aa		28.83	■■■□□ 2.21
U2AF1-208	ENST00000471250	CENPP	Q6IPU0	288 aa		28.83	■■■□□ 2.21
U2AF1-208	ENST00000471250	DUSP9	Q99956	384 aa	Known RBP	28.83	■■■□□ 2.21
U2AF1-208	ENST00000471250	KCND2	Q9NZV8	630 aa		28.83	■■■□□ 2.21
U2AF1-208	ENST00000471250	MORF4L1	Q9UBU8	362 aa		28.83	■■■□□ 2.21
U2AF1-208	ENST00000471250	NRBP1	Q9UHY1	535 aa		28.83	■■■□□ 2.21
U2AF1-208	ENST00000471250	SPAG1	Q07617	926 aa		28.83	■■■□□ 2.21
U2AF1-208	ENST00000471250	ANKRD40	Q6AI12	368 aa		28.83	■■■□□ 2.21
U2AF1-208	ENST00000471250	APTX	Q7Z2E3	356 aa	Known RBP	28.83	■■■□□ 2.21
U2AF1-208	ENST00000471250	CCDC186	Q7Z3E2	898 aa		28.83	■■■□□ 2.21
U2AF1-208	ENST00000471250	SMAP1	Q8IYB5	467 aa	Predicted RBP	28.83	■■■□□ 2.21
U2AF1-208	ENST00000471250	NOC3L	Q8WTT2	800 aa	Known RBP	28.83	■■■□□ 2.21
U2AF1-208	ENST00000471250	TRIM47	Q96LD4	638 aa		28.83	■■■□□ 2.21
U2AF1-208	ENST00000471250	FGD4	Q96M96	766 aa		28.83	■■■□□ 2.21
U2AF1-208	ENST00000471250	MPHOSPH6	Q99547	160 aa	Known RBP	28.83	■■■□□ 2.21
U2AF1-208	ENST00000471250	PTPN18	Q99952	460 aa		28.83	■■■□□ 2.21
U2AF1-208	ENST00000471250	PORCN	Q9H237	461 aa		28.83	■■■□□ 2.21
U2AF1-208	ENST00000471250	DBR1	Q9UK59	544 aa	Known RBP	28.83	■■■□□ 2.21
U2AF1-208	ENST00000471250	ZNFX1	Q9P2E3	1918 aa	Known RBP	28.82	■■■□□ 2.2
U2AF1-208	ENST00000471250	PGK2	P07205	417 aa		28.82	■■■□□ 2.2
U2AF1-208	ENST00000471250	PSMC5	P62195	406 aa		28.82	■■■□□ 2.2
U2AF1-208	ENST00000471250	ZSCAN30	Q86W11	494 aa		28.82	■■■□□ 2.2
U2AF1-208	ENST00000471250	C4orf19	Q8IY42	314 aa		28.82	■■■□□ 2.2
U2AF1-208	ENST00000471250	SEMA6B	Q9H3T3	888 aa		28.82	■■■□□ 2.2
U2AF1-208	ENST00000471250	THAP9	Q9H5L6	903 aa		28.82	■■■□□ 2.2
U2AF1-208	ENST00000471250	EFCC1	Q9HA90	598 aa		28.82	■■■□□ 2.2
U2AF1-208	ENST00000471250	LIMA1	Q9UHB6	759 aa	Known RBP	28.82	■■■□□ 2.2
U2AF1-208	ENST00000471250	PCDHA10	Q9Y5I2	948 aa		28.82	■■■□□ 2.2
U2AF1-208	ENST00000471250	CCDC144B	Q3MJ40	725 aa		28.81	■■■□□ 2.2
U2AF1-208	ENST00000471250	WDR78	Q5VTH9	848 aa		28.81	■■■□□ 2.2
U2AF1-208	ENST00000471250	MYOCD	Q8IZQ8	938 aa		28.81	■■■□□ 2.2
U2AF1-208	ENST00000471250	ANKRD13C	Q8N6S4	541 aa		28.81	■■■□□ 2.2
U2AF1-208	ENST00000471250	CTAGE1	Q96RT6	745 aa		28.81	■■■□□ 2.2
U2AF1-208	ENST00000471250	JPH1	Q9HDC5	661 aa	Predicted RBP	28.81	■■■□□ 2.2
U2AF1-208	ENST00000471250	INTS13	Q9NVM9	706 aa		28.81	■■■□□ 2.2
U2AF1-208	ENST00000471250	IMPACT	Q9P2X3	320 aa		28.81	■■■□□ 2.2
U2AF1-208	ENST00000471250	SLC9A2	Q9UBY0	812 aa		28.81	■■■□□ 2.2
U2AF1-208	ENST00000471250	ARHGEF35	A5YM69	484 aa		28.8	■■■□□ 2.2
U2AF1-208	ENST00000471250	LRRC41	Q15345	812 aa		28.8	■■■□□ 2.2
U2AF1-208	ENST00000471250	RASAL3	Q86YV0	1011 aa		28.8	■■■□□ 2.2
U2AF1-208	ENST00000471250	GLIS3	Q8NEA6	775 aa		28.8	■■■□□ 2.2
U2AF1-208	ENST00000471250	PARK7	Q99497	189 aa	Known RBP	28.8	■■■□□ 2.2
U2AF1-208	ENST00000471250	BCAS3	Q9H6U6	928 aa		28.8	■■■□□ 2.2
U2AF1-208	ENST00000471250	ZKSCAN5	Q9Y2L8	839 aa		28.8	■■■□□ 2.2
U2AF1-208	ENST00000471250	COL4A3BP	Q9Y5P4	624 aa		28.8	■■■□□ 2.2
U2AF1-208	ENST00000471250	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	28.8	■■■□□ 2.2
U2AF1-208	ENST00000471250	DOCK5	Q9H7D0	1870 aa		28.8	■■■□□ 2.2
U2AF1-208	ENST00000471250	LOC102724159	A0A0B4J2E5	919 aa		28.8	■■■□□ 2.2
U2AF1-208	ENST00000471250		A0A1B0GTH6	734 aa		28.8	■■■□□ 2.2
U2AF1-208	ENST00000471250	ESPN	B1AK53	854 aa		28.8	■■■□□ 2.2
U2AF1-208	ENST00000471250	PTGS1	P23219	599 aa		28.8	■■■□□ 2.2
U2AF1-208	ENST00000471250	SP2	Q02086	613 aa		28.8	■■■□□ 2.2
U2AF1-208	ENST00000471250	PWP2	Q15269	919 aa	Known RBP	28.8	■■■□□ 2.2
U2AF1-208	ENST00000471250	UGCG	Q16739	394 aa		28.8	■■■□□ 2.2
U2AF1-208	ENST00000471250	FOXR2	Q6PJQ5	311 aa		28.8	■■■□□ 2.2
U2AF1-208	ENST00000471250	SEPT14	Q6ZU15	432 aa		28.8	■■■□□ 2.2
U2AF1-208	ENST00000471250	SRRT	Q9BXP5	876 aa	Known RBP	28.8	■■■□□ 2.2
U2AF1-208	ENST00000471250	ZHX3	Q9H4I2	956 aa		28.8	■■■□□ 2.2
U2AF1-208	ENST00000471250	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	28.8	■■■□□ 2.2
U2AF1-208	ENST00000471250	TBC1D7	Q9P0N9	293 aa		28.8	■■■□□ 2.2
U2AF1-208	ENST00000471250	LRRC10B	A6NIK2	292 aa		28.79	■■■□□ 2.2
U2AF1-208	ENST00000471250	TBCA	O75347	108 aa	Known RBP	28.79	■■■□□ 2.2
U2AF1-208	ENST00000471250	GAP43	P17677	238 aa		28.79	■■■□□ 2.2
U2AF1-208	ENST00000471250	NR1I3	Q14994	352 aa		28.79	■■■□□ 2.2
U2AF1-208	ENST00000471250	TCP11X2	Q5H9J9	407 aa		28.79	■■■□□ 2.2
U2AF1-208	ENST00000471250	SFR1	Q86XK3	245 aa		28.79	■■■□□ 2.2
U2AF1-208	ENST00000471250	IRF2BP1	Q8IU81	584 aa		28.79	■■■□□ 2.2
U2AF1-208	ENST00000471250	FGFBP2	Q9BYJ0	223 aa		28.79	■■■□□ 2.2
U2AF1-208	ENST00000471250	WDR81	Q562E7	1941 aa		28.78	■■■□□ 2.2
U2AF1-208	ENST00000471250	RSPH10B2	B2RC85	870 aa		28.78	■■■□□ 2.2
U2AF1-208	ENST00000471250	KCNJ18	B7U540	433 aa		28.78	■■■□□ 2.2
U2AF1-208	ENST00000471250	KIF20A	O95235	890 aa		28.78	■■■□□ 2.2
U2AF1-208	ENST00000471250	RSPH10B	P0C881	870 aa		28.78	■■■□□ 2.2
U2AF1-208	ENST00000471250	GUCY2C	P25092	1073 aa		28.78	■■■□□ 2.2
U2AF1-208	ENST00000471250	ZNF157	P51786	506 aa	Predicted RBP	28.78	■■■□□ 2.2
U2AF1-208	ENST00000471250	KCNJ12	Q14500	433 aa		28.78	■■■□□ 2.2
U2AF1-208	ENST00000471250	TMC6	Q7Z403	805 aa		28.78	■■■□□ 2.2
U2AF1-208	ENST00000471250	CSGALNACT2	Q8N6G5	542 aa		28.78	■■■□□ 2.2
U2AF1-208	ENST00000471250	MORC4	Q8TE76	937 aa		28.78	■■■□□ 2.2
U2AF1-208	ENST00000471250	PSAP	P07602	524 aa		28.77	■■■□□ 2.2
U2AF1-208	ENST00000471250	LRRC63	Q05C16	580 aa		28.77	■■■□□ 2.2
U2AF1-208	ENST00000471250	KRT31	Q15323	416 aa		28.77	■■■□□ 2.2

Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms