RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 A0A1W2PQY0 241 aa7.52□□□□□ -1.21
CKS1B-204ENST00000471245 FADS2P1A8MWK0 482 aa7.52□□□□□ -1.21
CKS1B-204ENST00000471245 FKBP9O95302 570 aa7.52□□□□□ -1.21
CKS1B-204ENST00000471245 DNM2P50570 870 aa7.52□□□□□ -1.21
CKS1B-204ENST00000471245 IKZF1Q13422 519 aa7.52□□□□□ -1.21
CKS1B-204ENST00000471245 TTF1Q15361 905 aaPredicted RBP7.52□□□□□ -1.21
CKS1B-204ENST00000471245 CRY1Q16526 586 aa7.52□□□□□ -1.21
CKS1B-204ENST00000471245 FKBP9P1Q75LS8 142 aa7.52□□□□□ -1.21
CKS1B-204ENST00000471245 SLCO6A1Q86UG4 719 aa7.52□□□□□ -1.21
CKS1B-204ENST00000471245 NLGN2Q8NFZ4 835 aa7.52□□□□□ -1.21
CKS1B-204ENST00000471245 TMEM169Q96HH4 297 aa7.52□□□□□ -1.21
CKS1B-204ENST00000471245 HHIPL1Q96JK4 782 aa7.52□□□□□ -1.21
CKS1B-204ENST00000471245 CHAMP1Q96JM3 812 aa7.52□□□□□ -1.21
CKS1B-204ENST00000471245 CBLCQ9ULV8 474 aa7.52□□□□□ -1.21
CKS1B-204ENST00000471245 X6R8D5 127 aa7.52□□□□□ -1.21
CKS1B-204ENST00000471245 K7ESF4 209 aa7.51□□□□□ -1.21
CKS1B-204ENST00000471245 ULK1O75385 1050 aa7.51□□□□□ -1.21
CKS1B-204ENST00000471245 YBX3P16989 372 aaKnown RBP eCLIP7.51□□□□□ -1.21
CKS1B-204ENST00000471245 ID4P47928 161 aa7.51□□□□□ -1.21
CKS1B-204ENST00000471245 FAPQ12884 760 aa7.51□□□□□ -1.21
CKS1B-204ENST00000471245 HABP4Q5JVS0 413 aaKnown RBP7.51□□□□□ -1.21
CKS1B-204ENST00000471245 SLC23A3Q6PIS1 610 aa7.51□□□□□ -1.21
CKS1B-204ENST00000471245 C11orf74Q86VG3 221 aa7.51□□□□□ -1.21
CKS1B-204ENST00000471245 CISD2Q8N5K1 135 aaKnown RBP7.51□□□□□ -1.21
CKS1B-204ENST00000471245 C2orf69Q8N8R5 385 aa7.51□□□□□ -1.21
CKS1B-204ENST00000471245 SCYL1Q96KG9 808 aa7.51□□□□□ -1.21
CKS1B-204ENST00000471245 EPB41L1Q9H4G0 881 aa7.51□□□□□ -1.21
CKS1B-204ENST00000471245 EMC7Q9NPA0 242 aa7.51□□□□□ -1.21
CKS1B-204ENST00000471245 CATSPERZQ9NTU4 200 aa7.51□□□□□ -1.21
CKS1B-204ENST00000471245 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.51□□□□□ -1.21
CKS1B-204ENST00000471245 EID1Q9Y6B2 187 aa7.51□□□□□ -1.21
CKS1B-204ENST00000471245 CEP162Q5TB80 1403 aa7.51□□□□□ -1.21
CKS1B-204ENST00000471245 MYO5BQ9ULV0 1848 aa7.5□□□□□ -1.21
CKS1B-204ENST00000471245 NKTRP30414 1462 aaKnown RBP7.5□□□□□ -1.21
CKS1B-204ENST00000471245 PTPDC1A2A3K4 754 aa7.5□□□□□ -1.21
CKS1B-204ENST00000471245 WTIPA6NIX2 430 aaPredicted RBP7.5□□□□□ -1.21
CKS1B-204ENST00000471245 ZNF561-AS1K7EIQ3 104 aa7.5□□□□□ -1.21
CKS1B-204ENST00000471245 ATP2A2P16615 1042 aaKnown RBP7.5□□□□□ -1.21
CKS1B-204ENST00000471245 NEK2P51955 445 aa7.5□□□□□ -1.21
CKS1B-204ENST00000471245 GPR19Q15760 415 aa7.5□□□□□ -1.21
CKS1B-204ENST00000471245 ATP13A4Q4VNC1 1196 aa7.5□□□□□ -1.21
CKS1B-204ENST00000471245 CREB3L3Q68CJ9 461 aa7.5□□□□□ -1.21
CKS1B-204ENST00000471245 CEP68Q76N32 757 aa7.5□□□□□ -1.21
CKS1B-204ENST00000471245 RIOX2Q8IUF8 465 aa7.5□□□□□ -1.21
CKS1B-204ENST00000471245 TP53INP2Q8IXH6 220 aa7.5□□□□□ -1.21
CKS1B-204ENST00000471245 CNTD1Q8N815 330 aa7.5□□□□□ -1.21
CKS1B-204ENST00000471245 MTMR8Q96EF0 704 aa7.5□□□□□ -1.21
CKS1B-204ENST00000471245 MENTQ9BUN1 341 aa7.5□□□□□ -1.21
CKS1B-204ENST00000471245 BOCQ9BWV1 1114 aa7.5□□□□□ -1.21
CKS1B-204ENST00000471245 CARS2Q9HA77 564 aaKnown RBP7.5□□□□□ -1.21
CKS1B-204ENST00000471245 GOLGA2P5Q9HBQ8 144 aa7.5□□□□□ -1.21
CKS1B-204ENST00000471245 THG1LQ9NWX6 298 aaKnown RBP7.5□□□□□ -1.21
CKS1B-204ENST00000471245 TCEAL9Q9UHQ7 104 aa7.5□□□□□ -1.21
CKS1B-204ENST00000471245 AHDC1Q5TGY3 1603 aaPredicted RBP7.49□□□□□ -1.21
CKS1B-204ENST00000471245 TMEM2Q9UHN6 1383 aa7.49□□□□□ -1.21
CKS1B-204ENST00000471245 EFCAB6Q5THR3 1501 aa7.49□□□□□ -1.21
CKS1B-204ENST00000471245 ZGLP1P0C6A0 271 aa7.49□□□□□ -1.21
CKS1B-204ENST00000471245 GNAT1P11488 350 aa7.49□□□□□ -1.21
CKS1B-204ENST00000471245 PDE6AP16499 860 aa7.49□□□□□ -1.21
CKS1B-204ENST00000471245 KPNA1P52294 538 aaPredicted RBP7.49□□□□□ -1.21
CKS1B-204ENST00000471245 MCL1Q07820 350 aa7.49□□□□□ -1.21
CKS1B-204ENST00000471245 ITKQ08881 620 aa7.49□□□□□ -1.21
CKS1B-204ENST00000471245 SPIRE1Q08AE8 756 aa7.49□□□□□ -1.21
CKS1B-204ENST00000471245 SYDE2Q5VT97 1194 aa7.49□□□□□ -1.21
CKS1B-204ENST00000471245 ZNF772Q68DY9 489 aaPredicted RBP7.49□□□□□ -1.21
CKS1B-204ENST00000471245 HHIPL2Q6UWX4 724 aa7.49□□□□□ -1.21
CKS1B-204ENST00000471245 FMNL3Q8IVF7 1028 aa7.49□□□□□ -1.21
CKS1B-204ENST00000471245 EFHBQ8N7U6 833 aa7.49□□□□□ -1.21
CKS1B-204ENST00000471245 ANKS4BQ8N8V4 417 aa7.49□□□□□ -1.21
CKS1B-204ENST00000471245 CHTF18Q8WVB6 975 aa7.49□□□□□ -1.21
CKS1B-204ENST00000471245 TRMT2BQ96GJ1 504 aaKnown RBP7.49□□□□□ -1.21
CKS1B-204ENST00000471245 CCDC120Q96HB5 630 aa7.49□□□□□ -1.21
CKS1B-204ENST00000471245 GPR101Q96P66 508 aaPredicted RBP7.49□□□□□ -1.21
CKS1B-204ENST00000471245 JMJD8Q96S16 334 aa7.49□□□□□ -1.21
CKS1B-204ENST00000471245 MTA3Q9BTC8 594 aa7.49□□□□□ -1.21
CKS1B-204ENST00000471245 MARCH2Q9P0N8 246 aa7.49□□□□□ -1.21
CKS1B-204ENST00000471245 GULP1Q9UBP9 304 aa7.49□□□□□ -1.21
CKS1B-204ENST00000471245 COA3Q9Y2R0 106 aaPredicted RBP7.49□□□□□ -1.21
CKS1B-204ENST00000471245 SPEF1Q9Y4P9 236 aa7.49□□□□□ -1.21
CKS1B-204ENST00000471245 CDK12Q9NYV4 1490 aaPredicted RBP7.49□□□□□ -1.21
CKS1B-204ENST00000471245 MSH6P52701 1360 aa7.48□□□□□ -1.21
CKS1B-204ENST00000471245 FPR2P25090 351 aa7.48□□□□□ -1.21
CKS1B-204ENST00000471245 CHRNEQ04844 493 aa7.48□□□□□ -1.21
CKS1B-204ENST00000471245 ZP2Q05996 745 aa7.48□□□□□ -1.21
CKS1B-204ENST00000471245 DIP2AQ14689 1571 aa7.48□□□□□ -1.21
CKS1B-204ENST00000471245 NFE2Q16621 373 aaPredicted RBP7.48□□□□□ -1.21
CKS1B-204ENST00000471245 ARHGAP31Q2M1Z3 1444 aa7.48□□□□□ -1.21
CKS1B-204ENST00000471245 MROH9Q5TGP6 573 aa7.48□□□□□ -1.21
CKS1B-204ENST00000471245 IQSEC1Q6DN90 963 aa7.48□□□□□ -1.21
CKS1B-204ENST00000471245 ZNF574Q6ZN55 896 aaPredicted RBP7.48□□□□□ -1.21
CKS1B-204ENST00000471245 FGD6Q6ZV73 1430 aa7.48□□□□□ -1.21
CKS1B-204ENST00000471245 CBLL1Q75N03 491 aa7.48□□□□□ -1.21
CKS1B-204ENST00000471245 OTOP3Q7RTS5 596 aa7.48□□□□□ -1.21
CKS1B-204ENST00000471245 COG1Q8WTW3 980 aa7.48□□□□□ -1.21
CKS1B-204ENST00000471245 ALPK1Q96QP1 1244 aa7.48□□□□□ -1.21
CKS1B-204ENST00000471245 KCNJ15Q99712 375 aa7.48□□□□□ -1.21
CKS1B-204ENST00000471245 JAM3Q9BX67 310 aa7.48□□□□□ -1.21
CKS1B-204ENST00000471245 TRIM8Q9BZR9 551 aa7.48□□□□□ -1.21
CKS1B-204ENST00000471245 SMURF1Q9HCE7 757 aa7.48□□□□□ -1.21
CKS1B-204ENST00000471245 SPTLC3Q9NUV7 552 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms