RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 ZP2Q05996 745 aa10.39□□□□□ -0.75
SF3A1-206ENST00000471037 BECN1Q14457 450 aa10.39□□□□□ -0.75
SF3A1-206ENST00000471037 CATIPQ7Z7H3 387 aa10.39□□□□□ -0.75
SF3A1-206ENST00000471037 NLRX1Q86UT6 975 aa10.39□□□□□ -0.75
SF3A1-206ENST00000471037 HSCBQ8IWL3 235 aa10.39□□□□□ -0.75
SF3A1-206ENST00000471037 FBXL16Q8N461 479 aa10.39□□□□□ -0.75
SF3A1-206ENST00000471037 FIBCD1Q8N539 461 aa10.39□□□□□ -0.75
SF3A1-206ENST00000471037 GPRASP2Q96D09 838 aa10.39□□□□□ -0.75
SF3A1-206ENST00000471037 TMEM87BQ96K49 555 aa10.39□□□□□ -0.75
SF3A1-206ENST00000471037 C11orf84Q9BUA3 381 aaPredicted RBP10.39□□□□□ -0.75
SF3A1-206ENST00000471037 RTEL1Q9NZ71 1219 aa10.39□□□□□ -0.75
SF3A1-206ENST00000471037 TELO2Q9Y4R8 837 aa10.39□□□□□ -0.75
SF3A1-206ENST00000471037 POTEB3A0JP26 581 aa10.38□□□□□ -0.75
SF3A1-206ENST00000471037 MBLAC1A4D2B0 266 aaPredicted RBP10.38□□□□□ -0.75
SF3A1-206ENST00000471037 C19orf67A6NJJ6 358 aa10.38□□□□□ -0.75
SF3A1-206ENST00000471037 DCXO43602 365 aa10.38□□□□□ -0.75
SF3A1-206ENST00000471037 DDAH1O94760 285 aa10.38□□□□□ -0.75
SF3A1-206ENST00000471037 CPA1P15085 419 aa10.38□□□□□ -0.75
SF3A1-206ENST00000471037 CTNNB1P35222 781 aa10.38□□□□□ -0.75
SF3A1-206ENST00000471037 TCF7P36402 384 aaPredicted RBP10.38□□□□□ -0.75
SF3A1-206ENST00000471037 BMPR1AP36894 532 aa10.38□□□□□ -0.75
SF3A1-206ENST00000471037 LTBRP36941 435 aa10.38□□□□□ -0.75
SF3A1-206ENST00000471037 FGD1P98174 961 aa10.38□□□□□ -0.75
SF3A1-206ENST00000471037 MGAT3Q09327 533 aa10.38□□□□□ -0.75
SF3A1-206ENST00000471037 CTC1Q2NKJ3 1217 aa10.38□□□□□ -0.75
SF3A1-206ENST00000471037 UTP14CQ5TAP6 766 aaKnown RBP10.38□□□□□ -0.75
SF3A1-206ENST00000471037 USP17L6PQ6QN14 398 aa10.38□□□□□ -0.75
SF3A1-206ENST00000471037 POTEBQ6S5H4 581 aa10.38□□□□□ -0.75
SF3A1-206ENST00000471037 SMARCC2Q8TAQ2 1214 aa10.38□□□□□ -0.75
SF3A1-206ENST00000471037 IGDCC4Q8TDY8 1250 aa10.38□□□□□ -0.75
SF3A1-206ENST00000471037 CLP1Q92989 425 aaKnown RBP10.38□□□□□ -0.75
SF3A1-206ENST00000471037 CUL5Q93034 780 aa10.38□□□□□ -0.75
SF3A1-206ENST00000471037 CDHR1Q96JP9 859 aa10.38□□□□□ -0.75
SF3A1-206ENST00000471037 AGXT2Q9BYV1 514 aa10.38□□□□□ -0.75
SF3A1-206ENST00000471037 DOCK5Q9H7D0 1870 aa10.38□□□□□ -0.75
SF3A1-206ENST00000471037 RPLP2P05387 115 aaKnown RBP10.37□□□□□ -0.75
SF3A1-206ENST00000471037 GHRP10912 638 aa10.37□□□□□ -0.75
SF3A1-206ENST00000471037 KCNA2P16389 499 aa10.37□□□□□ -0.75
SF3A1-206ENST00000471037 KIF5BP33176 963 aa10.37□□□□□ -0.75
SF3A1-206ENST00000471037 AK2P54819 239 aa10.37□□□□□ -0.75
SF3A1-206ENST00000471037 SP4Q02446 784 aa10.37□□□□□ -0.75
SF3A1-206ENST00000471037 PPFIA1Q13136 1202 aa10.37□□□□□ -0.75
SF3A1-206ENST00000471037 COL9A3Q14050 684 aaPredicted RBP10.37□□□□□ -0.75
SF3A1-206ENST00000471037 LPIN1Q14693 890 aa10.37□□□□□ -0.75
SF3A1-206ENST00000471037 SMAD2Q15796 467 aaKnown RBP10.37□□□□□ -0.75
SF3A1-206ENST00000471037 GRIK4Q16099 956 aa10.37□□□□□ -0.75
SF3A1-206ENST00000471037 FBXO47Q5MNV8 452 aa10.37□□□□□ -0.75
SF3A1-206ENST00000471037 RUFY4Q6ZNE9 571 aa10.37□□□□□ -0.75
SF3A1-206ENST00000471037 Q6ZUG5 572 aa10.37□□□□□ -0.75
SF3A1-206ENST00000471037 RSPH3Q86UC2 560 aa10.37□□□□□ -0.75
SF3A1-206ENST00000471037 ADHFE1Q8IWW8 467 aa10.37□□□□□ -0.75
SF3A1-206ENST00000471037 ZNF654Q8IZM8 581 aa10.37□□□□□ -0.75
SF3A1-206ENST00000471037 TMTC2Q8N394 836 aa10.37□□□□□ -0.75
SF3A1-206ENST00000471037 CTCFLQ8NI51 663 aaPredicted RBP10.37□□□□□ -0.75
SF3A1-206ENST00000471037 ZNF689Q96CS4 500 aaPredicted RBP10.37□□□□□ -0.75
SF3A1-206ENST00000471037 RRP36Q96EU6 259 aaKnown RBP10.37□□□□□ -0.75
SF3A1-206ENST00000471037 TCEANC2Q96MN5 208 aa10.37□□□□□ -0.75
SF3A1-206ENST00000471037 LZTS2Q9BRK4 669 aa10.37□□□□□ -0.75
SF3A1-206ENST00000471037 LY9Q9HBG7 655 aa10.37□□□□□ -0.75
SF3A1-206ENST00000471037 CLDND1Q9NY35 253 aa10.37□□□□□ -0.75
SF3A1-206ENST00000471037 ERAP1Q9NZ08 941 aa10.37□□□□□ -0.75
SF3A1-206ENST00000471037 BAZ2BQ9UIF8 2168 aaKnown RBP10.37□□□□□ -0.75
SF3A1-206ENST00000471037 TUBE1Q9UJT0 475 aa10.37□□□□□ -0.75
SF3A1-206ENST00000471037 ATG2AQ2TAZ0 1938 aa10.37□□□□□ -0.75
SF3A1-206ENST00000471037 GSTTP1A0A1W2PQM5 241 aa10.36□□□□□ -0.75
SF3A1-206ENST00000471037 K7ELQ4 463 aaPredicted RBP10.36□□□□□ -0.75
SF3A1-206ENST00000471037 SH2B2O14492 632 aaPredicted RBP10.36□□□□□ -0.75
SF3A1-206ENST00000471037 ENPP3O14638 875 aa10.36□□□□□ -0.75
SF3A1-206ENST00000471037 GRM6O15303 877 aa10.36□□□□□ -0.75
SF3A1-206ENST00000471037 MAFGO15525 162 aa10.36□□□□□ -0.75
SF3A1-206ENST00000471037 ATP9AO75110 1047 aa10.36□□□□□ -0.75
SF3A1-206ENST00000471037 MMP1P03956 469 aa10.36□□□□□ -0.75
SF3A1-206ENST00000471037 ITGB5P18084 799 aa10.36□□□□□ -0.75
SF3A1-206ENST00000471037 LIFRP42702 1097 aa10.36□□□□□ -0.75
SF3A1-206ENST00000471037 HYAL1Q12794 435 aa10.36□□□□□ -0.75
SF3A1-206ENST00000471037 TOB2Q14106 344 aaPredicted RBP10.36□□□□□ -0.75
SF3A1-206ENST00000471037 CSPP1Q1MSJ5 1256 aa10.36□□□□□ -0.75
SF3A1-206ENST00000471037 MARCH8Q5T0T0 291 aa10.36□□□□□ -0.75
SF3A1-206ENST00000471037 TSHZ1Q6ZSZ6 1077 aa10.36□□□□□ -0.75
SF3A1-206ENST00000471037 SGMS1Q86VZ5 419 aa10.36□□□□□ -0.75
SF3A1-206ENST00000471037 CRIPAKQ8N1N5 446 aa10.36□□□□□ -0.75
SF3A1-206ENST00000471037 PIBF1Q8WXW3 757 aa10.36□□□□□ -0.75
SF3A1-206ENST00000471037 SEPT1Q8WYJ6 367 aa10.36□□□□□ -0.75
SF3A1-206ENST00000471037 P2RX5Q93086 422 aa10.36□□□□□ -0.75
SF3A1-206ENST00000471037 ZSCAN31Q96LW9 406 aaPredicted RBP10.36□□□□□ -0.75
SF3A1-206ENST00000471037 PLVAPQ9BX97 442 aa10.36□□□□□ -0.75
SF3A1-206ENST00000471037 KCNH6Q9H252 994 aa10.36□□□□□ -0.75
SF3A1-206ENST00000471037 SEC63Q9UGP8 760 aaKnown RBP10.36□□□□□ -0.75
SF3A1-206ENST00000471037 LIMCH1Q9UPQ0 1083 aa10.36□□□□□ -0.75
SF3A1-206ENST00000471037 UBIAD1Q9Y5Z9 338 aa10.36□□□□□ -0.75
SF3A1-206ENST00000471037 SQORQ9Y6N5 450 aa10.36□□□□□ -0.75
SF3A1-206ENST00000471037 MUC6Q6W4X9 2439 aa10.36□□□□□ -0.75
SF3A1-206ENST00000471037 PIEZO1Q92508 2521 aa10.36□□□□□ -0.75
SF3A1-206ENST00000471037 RRN3P2A6NIE6 340 aa10.35□□□□□ -0.75
SF3A1-206ENST00000471037 MBTPS2O43462 519 aa10.35□□□□□ -0.75
SF3A1-206ENST00000471037 DGKIO75912 1065 aa10.35□□□□□ -0.75
SF3A1-206ENST00000471037 CD2BP2O95400 341 aaKnown RBP10.35□□□□□ -0.75
SF3A1-206ENST00000471037 IRS1P35568 1242 aa10.35□□□□□ -0.75
SF3A1-206ENST00000471037 GNAQP50148 359 aa10.35□□□□□ -0.75
SF3A1-206ENST00000471037 EVCP57679 992 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms