RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 SUPT20HL2P0C7V6 817 aa10.89□□□□□ -0.67
CCM2-204ENST00000470837 SPATA31C1P0DKV0 1188 aa10.89□□□□□ -0.67
CCM2-204ENST00000470837 FLT3LGP49771 235 aa10.89□□□□□ -0.67
CCM2-204ENST00000470837 SP2Q02086 613 aa10.89□□□□□ -0.67
CCM2-204ENST00000470837 TYRO3Q06418 890 aa10.89□□□□□ -0.67
CCM2-204ENST00000470837 MCM6Q14566 821 aa10.89□□□□□ -0.67
CCM2-204ENST00000470837 SWSAP1Q6NVH7 229 aa10.89□□□□□ -0.67
CCM2-204ENST00000470837 B3GNT9Q6UX72 402 aa10.89□□□□□ -0.67
CCM2-204ENST00000470837 RBM43Q6ZSC3 357 aaKnown RBP10.89□□□□□ -0.67
CCM2-204ENST00000470837 GRAMD1CQ8IYS0 662 aa10.89□□□□□ -0.67
CCM2-204ENST00000470837 TRIML1Q8N9V2 468 aa10.89□□□□□ -0.67
CCM2-204ENST00000470837 CD99L2Q8TCZ2 262 aa10.89□□□□□ -0.67
CCM2-204ENST00000470837 RAET1EQ8TD07 263 aa10.89□□□□□ -0.67
CCM2-204ENST00000470837 ARHGAP39Q9C0H5 1083 aa10.89□□□□□ -0.67
CCM2-204ENST00000470837 BHMT2Q9H2M3 363 aa10.89□□□□□ -0.67
CCM2-204ENST00000470837 ZNF302Q9NR11 478 aa10.89□□□□□ -0.67
CCM2-204ENST00000470837 EXOC1Q9NV70 894 aa10.89□□□□□ -0.67
CCM2-204ENST00000470837 KBTBD4Q9NVX7 518 aa10.89□□□□□ -0.67
CCM2-204ENST00000470837 GABBR1Q9UBS5 961 aa10.89□□□□□ -0.67
CCM2-204ENST00000470837 GJD2Q9UKL4 321 aa10.89□□□□□ -0.67
CCM2-204ENST00000470837 FAM184BQ9ULE4 1060 aa10.89□□□□□ -0.67
CCM2-204ENST00000470837 PCDHA5Q9Y5H7 936 aa10.89□□□□□ -0.67
CCM2-204ENST00000470837 RBM47A0AV96 593 aaKnown RBP10.88□□□□□ -0.67
CCM2-204ENST00000470837 GOLGA6L3A6NEY3 463 aa10.88□□□□□ -0.67
CCM2-204ENST00000470837 E9PMD0 336 aa10.88□□□□□ -0.67
CCM2-204ENST00000470837 BIN1O00499 593 aa10.88□□□□□ -0.67
CCM2-204ENST00000470837 TBCAO75347 108 aaKnown RBP10.88□□□□□ -0.67
CCM2-204ENST00000470837 RPN1P04843 607 aaKnown RBP10.88□□□□□ -0.67
CCM2-204ENST00000470837 XRCC6P12956 609 aaKnown RBP eCLIP10.88□□□□□ -0.67
CCM2-204ENST00000470837 IDEP14735 1019 aa10.88□□□□□ -0.67
CCM2-204ENST00000470837 CYP2C19P33261 490 aa10.88□□□□□ -0.67
CCM2-204ENST00000470837 ADCYAP1R1P41586 468 aa10.88□□□□□ -0.67
CCM2-204ENST00000470837 PRMT2P55345 433 aa10.88□□□□□ -0.67
CCM2-204ENST00000470837 TNFAIP2Q03169 654 aa10.88□□□□□ -0.67
CCM2-204ENST00000470837 PRKCZQ05513 592 aa10.88□□□□□ -0.67
CCM2-204ENST00000470837 GSE1Q14687 1217 aa10.88□□□□□ -0.67
CCM2-204ENST00000470837 CCDC144BQ3MJ40 725 aa10.88□□□□□ -0.67
CCM2-204ENST00000470837 DUSP28Q4G0W2 176 aa10.88□□□□□ -0.67
CCM2-204ENST00000470837 NAALADL2Q58DX5 795 aa10.88□□□□□ -0.67
CCM2-204ENST00000470837 TAPT1Q6NXT6 567 aa10.88□□□□□ -0.67
CCM2-204ENST00000470837 CCDC62Q6P9F0 684 aa10.88□□□□□ -0.67
CCM2-204ENST00000470837 SH3RF1Q7Z6J0 888 aa10.88□□□□□ -0.67
CCM2-204ENST00000470837 GPBP1Q86WP2 473 aa10.88□□□□□ -0.67
CCM2-204ENST00000470837 CCDC65Q8IXS2 484 aa10.88□□□□□ -0.67
CCM2-204ENST00000470837 C4orf19Q8IY42 314 aa10.88□□□□□ -0.67
CCM2-204ENST00000470837 OR6J1Q8NGC5 347 aa10.88□□□□□ -0.67
CCM2-204ENST00000470837 STAMQ92783 540 aa10.88□□□□□ -0.67
CCM2-204ENST00000470837 GLG1Q92896 1179 aa10.88□□□□□ -0.67
CCM2-204ENST00000470837 AP5M1Q9H0R1 490 aa10.88□□□□□ -0.67
CCM2-204ENST00000470837 BLZF1Q9H2G9 400 aa10.88□□□□□ -0.67
CCM2-204ENST00000470837 PDGFCQ9NRA1 345 aa10.88□□□□□ -0.67
CCM2-204ENST00000470837 NRBP2Q9NSY0 501 aa10.88□□□□□ -0.67
CCM2-204ENST00000470837 KCND2Q9NZV8 630 aa10.88□□□□□ -0.67
CCM2-204ENST00000470837 SRRDQ9UH36 339 aa10.88□□□□□ -0.67
CCM2-204ENST00000470837 FOXN1O15353 648 aa10.87□□□□□ -0.67
CCM2-204ENST00000470837 LYPLA2O95372 231 aa10.87□□□□□ -0.67
CCM2-204ENST00000470837 ARIH2O95376 493 aa10.87□□□□□ -0.67
CCM2-204ENST00000470837 AKR1A1P14550 325 aa10.87□□□□□ -0.67
CCM2-204ENST00000470837 CNGA1P29973 690 aa10.87□□□□□ -0.67
CCM2-204ENST00000470837 YWHABP31946 246 aaKnown RBP10.87□□□□□ -0.67
CCM2-204ENST00000470837 TCF7P36402 384 aaPredicted RBP10.87□□□□□ -0.67
CCM2-204ENST00000470837 STAT5BP51692 787 aa10.87□□□□□ -0.67
CCM2-204ENST00000470837 NLRP12P59046 1061 aa10.87□□□□□ -0.67
CCM2-204ENST00000470837 MDM2Q00987 491 aaPredicted RBP10.87□□□□□ -0.67
CCM2-204ENST00000470837 DPYDQ12882 1025 aa10.87□□□□□ -0.67
CCM2-204ENST00000470837 STIM1Q13586 685 aa10.87□□□□□ -0.67
CCM2-204ENST00000470837 CUL4BQ13620 913 aa10.87□□□□□ -0.67
CCM2-204ENST00000470837 ECM1Q16610 540 aa10.87□□□□□ -0.67
CCM2-204ENST00000470837 CCL14Q16627 93 aa10.87□□□□□ -0.67
CCM2-204ENST00000470837 XKR3Q5GH77 459 aa10.87□□□□□ -0.67
CCM2-204ENST00000470837 CNNM4Q6P4Q7 775 aa10.87□□□□□ -0.67
CCM2-204ENST00000470837 ABHD15Q6UXT9 468 aa10.87□□□□□ -0.67
CCM2-204ENST00000470837 TRMT1LQ7Z2T5 733 aaKnown RBP10.87□□□□□ -0.67
CCM2-204ENST00000470837 SYT2Q8N9I0 419 aaPredicted RBP10.87□□□□□ -0.67
CCM2-204ENST00000470837 PPTC7Q8NI37 304 aa10.87□□□□□ -0.67
CCM2-204ENST00000470837 PIGOQ8TEQ8 1089 aa10.87□□□□□ -0.67
CCM2-204ENST00000470837 DDX12PQ92771 950 aa10.87□□□□□ -0.67
CCM2-204ENST00000470837 ERCC4Q92889 916 aaPredicted RBP10.87□□□□□ -0.67
CCM2-204ENST00000470837 FAM167AQ96KS9 214 aa10.87□□□□□ -0.67
CCM2-204ENST00000470837 C7orf25Q9BPX7 421 aa10.87□□□□□ -0.67
CCM2-204ENST00000470837 TRIM9Q9C026 710 aa10.87□□□□□ -0.67
CCM2-204ENST00000470837 ZHX3Q9H4I2 956 aa10.87□□□□□ -0.67
CCM2-204ENST00000470837 SPC25Q9HBM1 224 aa10.87□□□□□ -0.67
CCM2-204ENST00000470837 ANKEF1Q9NU02 776 aa10.87□□□□□ -0.67
CCM2-204ENST00000470837 BLOC1S4Q9NUP1 217 aa10.87□□□□□ -0.67
CCM2-204ENST00000470837 TUBE1Q9UJT0 475 aa10.87□□□□□ -0.67
CCM2-204ENST00000470837 DBR1Q9UK59 544 aaKnown RBP10.87□□□□□ -0.67
CCM2-204ENST00000470837 PVALEFA0A1B0GWK0 134 aa10.86□□□□□ -0.67
CCM2-204ENST00000470837 BECN2A8MW95 431 aa10.86□□□□□ -0.67
CCM2-204ENST00000470837 ATG7O95352 703 aa10.86□□□□□ -0.67
CCM2-204ENST00000470837 PRR29P0C7W0 189 aa10.86□□□□□ -0.67
CCM2-204ENST00000470837 SMPD1P17405 629 aa10.86□□□□□ -0.67
CCM2-204ENST00000470837 CTGFP29279 349 aa10.86□□□□□ -0.67
CCM2-204ENST00000470837 SLC26A2P50443 739 aa10.86□□□□□ -0.67
CCM2-204ENST00000470837 SLC12A3P55017 1021 aa10.86□□□□□ -0.67
CCM2-204ENST00000470837 TPM4P67936 248 aa10.86□□□□□ -0.67
CCM2-204ENST00000470837 PRKCEQ02156 737 aa10.86□□□□□ -0.67
CCM2-204ENST00000470837 KCNB1Q14721 858 aa10.86□□□□□ -0.67
CCM2-204ENST00000470837 DGKDQ16760 1214 aa10.86□□□□□ -0.67
CCM2-204ENST00000470837 XKR9Q5GH70 373 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms