RNA–Protein interactions for RNA: ENST00000470531.5

CHD3-208, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 3,744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-208ENST00000470531 TTI1O43156 1089 aa11.68□□□□□ -0.54
CHD3-208ENST00000470531 RAD51CO43502 376 aa11.68□□□□□ -0.54
CHD3-208ENST00000470531 KIF1CO43896 1103 aaKnown RBP11.68□□□□□ -0.54
CHD3-208ENST00000470531 MYCLP12524 364 aaPredicted RBP11.68□□□□□ -0.54
CHD3-208ENST00000470531 CTNNA2P26232 953 aa11.68□□□□□ -0.54
CHD3-208ENST00000470531 HNRNPH1P31943 449 aaKnown RBP11.68□□□□□ -0.54
CHD3-208ENST00000470531 PBX1P40424 430 aa11.68□□□□□ -0.54
CHD3-208ENST00000470531 TTI2Q6NXR4 508 aa11.68□□□□□ -0.54
CHD3-208ENST00000470531 SGSM3Q96HU1 749 aa11.68□□□□□ -0.54
CHD3-208ENST00000470531 GOLGA8KD6RF30 607 aa11.67□□□□□ -0.54
CHD3-208ENST00000470531 IFNB1P01574 187 aa11.67□□□□□ -0.54
CHD3-208ENST00000470531 FGFR2P21802 821 aa11.67□□□□□ -0.54
CHD3-208ENST00000470531 TUBB4BP68371 445 aa11.67□□□□□ -0.54
CHD3-208ENST00000470531 NT5DC1Q5TFE4 455 aa11.67□□□□□ -0.54
CHD3-208ENST00000470531 ARL6IP4Q66PJ3 421 aaKnown RBP11.67□□□□□ -0.54
CHD3-208ENST00000470531 KAZNQ674X7 775 aa11.67□□□□□ -0.54
CHD3-208ENST00000470531 MCTP2Q6DN12 878 aa11.67□□□□□ -0.54
CHD3-208ENST00000470531 ARMCX6Q7L4S7 300 aa11.67□□□□□ -0.54
CHD3-208ENST00000470531 CCDC26Q8TAB7 109 aa11.67□□□□□ -0.54
CHD3-208ENST00000470531 GLG1Q92896 1179 aa11.67□□□□□ -0.54
CHD3-208ENST00000470531 DUSP9Q99956 384 aaKnown RBP11.67□□□□□ -0.54
CHD3-208ENST00000470531 ELAC2Q9BQ52 826 aaKnown RBP11.67□□□□□ -0.54
CHD3-208ENST00000470531 NYXQ9GZU5 481 aa11.67□□□□□ -0.54
CHD3-208ENST00000470531 AMFRQ9UKV5 643 aa11.67□□□□□ -0.54
CHD3-208ENST00000470531 WDR19Q8NEZ3 1342 aa11.67□□□□□ -0.54
CHD3-208ENST00000470531 RSPH10B2B2RC85 870 aa11.67□□□□□ -0.54
CHD3-208ENST00000470531 RGS16O15492 202 aaPredicted RBP11.67□□□□□ -0.54
CHD3-208ENST00000470531 ATMINO43313 823 aaPredicted RBP11.67□□□□□ -0.54
CHD3-208ENST00000470531 RSPH10BP0C881 870 aa11.67□□□□□ -0.54
CHD3-208ENST00000470531 CLNS1AP54105 237 aaKnown RBP11.67□□□□□ -0.54
CHD3-208ENST00000470531 SMAD1Q15797 465 aaKnown RBP11.67□□□□□ -0.54
CHD3-208ENST00000470531 CYP4F22Q6NT55 531 aa11.67□□□□□ -0.54
CHD3-208ENST00000470531 GIMAP8Q8ND71 665 aaPredicted RBP11.67□□□□□ -0.54
CHD3-208ENST00000470531 RPGRIP1Q96KN7 1286 aa11.67□□□□□ -0.54
CHD3-208ENST00000470531 FBXL5Q9UKA1 691 aa11.67□□□□□ -0.54
CHD3-208ENST00000470531 FRMD4BQ9Y2L6 1034 aa11.67□□□□□ -0.54
CHD3-208ENST00000470531 MRC1P22897 1456 aa11.67□□□□□ -0.54
CHD3-208ENST00000470531 ERVV-1B6SEH8 477 aa11.67□□□□□ -0.54
CHD3-208ENST00000470531 CAMTA2O94983 1202 aa11.67□□□□□ -0.54
CHD3-208ENST00000470531 SESN3P58005 492 aa11.67□□□□□ -0.54
CHD3-208ENST00000470531 ZC2HC1CQ53FD0 456 aaPredicted RBP11.67□□□□□ -0.54
CHD3-208ENST00000470531 WDR78Q5VTH9 848 aa11.67□□□□□ -0.54
CHD3-208ENST00000470531 FBXL16Q8N461 479 aa11.67□□□□□ -0.54
CHD3-208ENST00000470531 ARFGAP2Q8N6H7 521 aa11.67□□□□□ -0.54
CHD3-208ENST00000470531 KIAA0895Q8NCT3 520 aa11.67□□□□□ -0.54
CHD3-208ENST00000470531 HOOK2Q96ED9 719 aa11.67□□□□□ -0.54
CHD3-208ENST00000470531 SAMD15Q9P1V8 674 aa11.67□□□□□ -0.54
CHD3-208ENST00000470531 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.67□□□□□ -0.54
CHD3-208ENST00000470531 PNPLA7Q6ZV29 1317 aa11.66□□□□□ -0.54
CHD3-208ENST00000470531 KCNJ1P48048 391 aa11.66□□□□□ -0.54
CHD3-208ENST00000470531 IFI16Q16666 785 aaKnown RBP11.66□□□□□ -0.54
CHD3-208ENST00000470531 NAALADL2Q58DX5 795 aa11.66□□□□□ -0.54
CHD3-208ENST00000470531 ODR4Q5SWX8 454 aa11.66□□□□□ -0.54
CHD3-208ENST00000470531 C12orf60Q5U649 245 aa11.66□□□□□ -0.54
CHD3-208ENST00000470531 WDR93Q6P2C0 686 aa11.66□□□□□ -0.54
CHD3-208ENST00000470531 CACNA2D3Q8IZS8 1091 aa11.66□□□□□ -0.54
CHD3-208ENST00000470531 TCP10L2B9ZVM9 353 aa11.66□□□□□ -0.54
CHD3-208ENST00000470531 STXBP3O00186 592 aa11.66□□□□□ -0.54
CHD3-208ENST00000470531 ITGA4P13612 1032 aa11.66□□□□□ -0.54
CHD3-208ENST00000470531 NMT1P30419 496 aaKnown RBP11.66□□□□□ -0.54
CHD3-208ENST00000470531 PRKG1Q13976 671 aa11.66□□□□□ -0.54
CHD3-208ENST00000470531 HEMGNQ9BXL5 484 aa11.66□□□□□ -0.54
CHD3-208ENST00000470531 SH2D4AQ9H788 454 aa11.66□□□□□ -0.54
CHD3-208ENST00000470531 SART1O43290 800 aaKnown RBP11.65□□□□□ -0.54
CHD3-208ENST00000470531 EZRP15311 586 aaKnown RBP11.65□□□□□ -0.54
CHD3-208ENST00000470531 YY1P25490 414 aa11.65□□□□□ -0.54
CHD3-208ENST00000470531 MIGA2Q7L4E1 593 aa11.65□□□□□ -0.54
CHD3-208ENST00000470531 LRRC27Q9C0I9 530 aa11.65□□□□□ -0.54
CHD3-208ENST00000470531 NWD2Q9ULI1 1742 aa11.65□□□□□ -0.54
CHD3-208ENST00000470531 AFDNP55196 1824 aaKnown RBP11.65□□□□□ -0.54
CHD3-208ENST00000470531 WDR91A4D1P6 747 aa11.65□□□□□ -0.54
CHD3-208ENST00000470531 SEMA3EO15041 775 aa11.65□□□□□ -0.54
CHD3-208ENST00000470531 RPS6KA5O75582 802 aa11.65□□□□□ -0.54
CHD3-208ENST00000470531 NTSR2O95665 410 aa11.65□□□□□ -0.54
CHD3-208ENST00000470531 MYBL1P10243 752 aa11.65□□□□□ -0.54
CHD3-208ENST00000470531 CDC25CP30307 473 aa11.65□□□□□ -0.54
CHD3-208ENST00000470531 CETN1Q12798 172 aa11.65□□□□□ -0.54
CHD3-208ENST00000470531 CALCOCO2Q13137 446 aa11.65□□□□□ -0.54
CHD3-208ENST00000470531 EPC2Q52LR7 807 aa11.65□□□□□ -0.54
CHD3-208ENST00000470531 SYCP2LQ5T4T6 812 aa11.65□□□□□ -0.54
CHD3-208ENST00000470531 SLFN13Q68D06 897 aa11.65□□□□□ -0.54
CHD3-208ENST00000470531 DENND2CQ68D51 928 aa11.65□□□□□ -0.54
CHD3-208ENST00000470531 FAM47EQ6ZV65 393 aa11.65□□□□□ -0.54
CHD3-208ENST00000470531 DGKHQ86XP1 1220 aa11.65□□□□□ -0.54
CHD3-208ENST00000470531 FAM178BQ8IXR5 827 aa11.65□□□□□ -0.54
CHD3-208ENST00000470531 LRRC45Q96CN5 670 aa11.65□□□□□ -0.54
CHD3-208ENST00000470531 TCHPQ9BT92 498 aa11.65□□□□□ -0.54
CHD3-208ENST00000470531 SALL4Q9UJQ4 1053 aa11.65□□□□□ -0.54
CHD3-208ENST00000470531 ZBTB39O15060 712 aa11.65□□□□□ -0.54
CHD3-208ENST00000470531 RHOBTB3O94955 611 aa11.65□□□□□ -0.54
CHD3-208ENST00000470531 CASP4P49662 377 aa11.65□□□□□ -0.54
CHD3-208ENST00000470531 PTK2Q05397 1052 aa11.65□□□□□ -0.54
CHD3-208ENST00000470531 BIRC3Q13489 604 aa11.65□□□□□ -0.54
CHD3-208ENST00000470531 SUPT20HQ8NEM7 779 aa11.65□□□□□ -0.54
CHD3-208ENST00000470531 BCAS3Q9H6U6 928 aa11.65□□□□□ -0.54
CHD3-208ENST00000470531 MAD2L2Q9UI95 211 aa11.65□□□□□ -0.54
CHD3-208ENST00000470531 PSMD14O00487 310 aa11.64□□□□□ -0.55
CHD3-208ENST00000470531 ZNF263O14978 683 aa11.64□□□□□ -0.55
CHD3-208ENST00000470531 FGFR4P22455 802 aa11.64□□□□□ -0.55
CHD3-208ENST00000470531 RPL13P26373 211 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms