RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 PCDHA1Q9Y5I3 950 aa7.55□□□□□ -1.2
VAMP3-202ENST00000470357 USP3Q9Y6I4 520 aa7.55□□□□□ -1.2
VAMP3-202ENST00000470357 MORC2Q9Y6X9 1032 aaPredicted RBP7.55□□□□□ -1.2
VAMP3-202ENST00000470357 ZSWIM8A7E2V4 1837 aa7.55□□□□□ -1.2
VAMP3-202ENST00000470357 MYH7BA7E2Y1 1941 aa7.54□□□□□ -1.2
VAMP3-202ENST00000470357 CCL15-CCL14A0A0B4J2E2 113 aa7.54□□□□□ -1.2
VAMP3-202ENST00000470357 A0A0G2JLL6 359 aaPredicted RBP7.54□□□□□ -1.2
VAMP3-202ENST00000470357 KIF28PB7ZC32 967 aa7.54□□□□□ -1.2
VAMP3-202ENST00000470357 FIBPO43427 364 aa7.54□□□□□ -1.2
VAMP3-202ENST00000470357 WIPF1O43516 503 aa7.54□□□□□ -1.2
VAMP3-202ENST00000470357 TLR2O60603 784 aa7.54□□□□□ -1.2
VAMP3-202ENST00000470357 DKK1O94907 266 aa7.54□□□□□ -1.2
VAMP3-202ENST00000470357 F11P03951 625 aa7.54□□□□□ -1.2
VAMP3-202ENST00000470357 ICAM1P05362 532 aa7.54□□□□□ -1.2
VAMP3-202ENST00000470357 HOXA7P31268 230 aaPredicted RBP7.54□□□□□ -1.2
VAMP3-202ENST00000470357 NASPP49321 788 aaPredicted RBP7.54□□□□□ -1.2
VAMP3-202ENST00000470357 UBE2HP62256 183 aa7.54□□□□□ -1.2
VAMP3-202ENST00000470357 AP3B2Q13367 1082 aa7.54□□□□□ -1.2
VAMP3-202ENST00000470357 SNAPC2Q13487 334 aa7.54□□□□□ -1.2
VAMP3-202ENST00000470357 ARHGEF6Q15052 776 aa7.54□□□□□ -1.2
VAMP3-202ENST00000470357 STK38Q15208 465 aa7.54□□□□□ -1.2
VAMP3-202ENST00000470357 NONOQ15233 471 aaKnown RBP eCLIP7.54□□□□□ -1.2
VAMP3-202ENST00000470357 SF3A1Q15459 793 aaKnown RBP7.54□□□□□ -1.2
VAMP3-202ENST00000470357 CCL15Q16663 113 aa7.54□□□□□ -1.2
VAMP3-202ENST00000470357 TKFCQ3LXA3 575 aa7.54□□□□□ -1.2
VAMP3-202ENST00000470357 CRTC2Q53ET0 693 aaPredicted RBP7.54□□□□□ -1.2
VAMP3-202ENST00000470357 KIAA1755Q5JYT7 1200 aa7.54□□□□□ -1.2
VAMP3-202ENST00000470357 ANO1Q5XXA6 986 aa7.54□□□□□ -1.2
VAMP3-202ENST00000470357 CATSPERGQ6ZRH7 1159 aa7.54□□□□□ -1.2
VAMP3-202ENST00000470357 PRRT2Q7Z6L0 340 aaPredicted RBP7.54□□□□□ -1.2
VAMP3-202ENST00000470357 CCDC84Q86UT8 332 aaPredicted RBP7.54□□□□□ -1.2
VAMP3-202ENST00000470357 MCF2L2Q86YR7 1114 aa7.54□□□□□ -1.2
VAMP3-202ENST00000470357 GTF3C2Q8WUA4 911 aaPredicted RBP7.54□□□□□ -1.2
VAMP3-202ENST00000470357 DPF3Q92784 378 aa7.54□□□□□ -1.2
VAMP3-202ENST00000470357 TNFRSF25Q93038 417 aa7.54□□□□□ -1.2
VAMP3-202ENST00000470357 NIFKQ9BYG3 293 aaKnown RBP7.54□□□□□ -1.2
VAMP3-202ENST00000470357 CPVLQ9H3G5 476 aa7.54□□□□□ -1.2
VAMP3-202ENST00000470357 GJB4Q9NTQ9 266 aa7.54□□□□□ -1.2
VAMP3-202ENST00000470357 MAP3K20Q9NYL2 800 aaKnown RBP7.54□□□□□ -1.2
VAMP3-202ENST00000470357 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.54□□□□□ -1.2
VAMP3-202ENST00000470357 RCOR1Q9UKL0 485 aa7.54□□□□□ -1.2
VAMP3-202ENST00000470357 CNPY2Q9Y2B0 182 aa7.54□□□□□ -1.2
VAMP3-202ENST00000470357 SMCHD1A6NHR9 2005 aa7.54□□□□□ -1.2
VAMP3-202ENST00000470357 A0A0G2JMZ2 1700 aa7.53□□□□□ -1.2
VAMP3-202ENST00000470357 M0R2N6 131 aa7.53□□□□□ -1.2
VAMP3-202ENST00000470357 LAD1O00515 517 aa7.53□□□□□ -1.2
VAMP3-202ENST00000470357 ATP2A1O14983 1001 aa7.53□□□□□ -1.2
VAMP3-202ENST00000470357 PPP6R2O75170 966 aa7.53□□□□□ -1.2
VAMP3-202ENST00000470357 PRPF40AO75400 957 aaKnown RBP7.53□□□□□ -1.2
VAMP3-202ENST00000470357 CETPP11597 493 aa7.53□□□□□ -1.2
VAMP3-202ENST00000470357 MSX1P28360 303 aa7.53□□□□□ -1.2
VAMP3-202ENST00000470357 COPB2P35606 906 aa7.53□□□□□ -1.2
VAMP3-202ENST00000470357 PLA2G4AP47712 749 aa7.53□□□□□ -1.2
VAMP3-202ENST00000470357 GJA8P48165 433 aa7.53□□□□□ -1.2
VAMP3-202ENST00000470357 GTF2A2P52657 109 aa7.53□□□□□ -1.2
VAMP3-202ENST00000470357 IRX3P78415 501 aaPredicted RBP7.53□□□□□ -1.2
VAMP3-202ENST00000470357 SLC39A14Q15043 492 aa7.53□□□□□ -1.2
VAMP3-202ENST00000470357 NPY5RQ15761 445 aa7.53□□□□□ -1.2
VAMP3-202ENST00000470357 FOXD4L6Q3SYB3 417 aaPredicted RBP7.53□□□□□ -1.2
VAMP3-202ENST00000470357 TBCELQ5QJ74 424 aa7.53□□□□□ -1.2
VAMP3-202ENST00000470357 C17orf99Q6UX52 265 aa7.53□□□□□ -1.2
VAMP3-202ENST00000470357 FOXD4L3Q6VB84 417 aaPredicted RBP7.53□□□□□ -1.2
VAMP3-202ENST00000470357 SIX5Q8N196 739 aa7.53□□□□□ -1.2
VAMP3-202ENST00000470357 LEO1Q8WVC0 666 aaPredicted RBP7.53□□□□□ -1.2
VAMP3-202ENST00000470357 SYAP1Q96A49 352 aaPredicted RBP7.53□□□□□ -1.2
VAMP3-202ENST00000470357 COA7Q96BR5 231 aa7.53□□□□□ -1.2
VAMP3-202ENST00000470357 SLC38A10Q9HBR0 1119 aa7.53□□□□□ -1.2
VAMP3-202ENST00000470357 LMBRD1Q9NUN5 540 aa7.53□□□□□ -1.2
VAMP3-202ENST00000470357 SCHIP1Q9P0W5 487 aaPredicted RBP7.53□□□□□ -1.2
VAMP3-202ENST00000470357 CCPG1Q9ULG6 757 aa7.53□□□□□ -1.2
VAMP3-202ENST00000470357 PCDHA6Q9UN73 950 aa7.53□□□□□ -1.2
VAMP3-202ENST00000470357 ADAMTS5Q9UNA0 930 aa7.53□□□□□ -1.2
VAMP3-202ENST00000470357 AGTPBP1Q9UPW5 1226 aa7.53□□□□□ -1.2
VAMP3-202ENST00000470357 SLC45A1Q9Y2W3 748 aa7.53□□□□□ -1.2
VAMP3-202ENST00000470357 RABGAP1Q9Y3P9 1069 aa7.53□□□□□ -1.2
VAMP3-202ENST00000470357 PCDHA8Q9Y5H6 950 aa7.53□□□□□ -1.2
VAMP3-202ENST00000470357 A0A1B0GTH6 734 aa7.52□□□□□ -1.21
VAMP3-202ENST00000470357 A0A1W2PPC1 479 aa7.52□□□□□ -1.21
VAMP3-202ENST00000470357 SPDYE3A6NKU9 549 aa7.52□□□□□ -1.21
VAMP3-202ENST00000470357 BTBD19C9JJ37 291 aa7.52□□□□□ -1.21
VAMP3-202ENST00000470357 GCOM1H8Y6P7 765 aaPredicted RBP7.52□□□□□ -1.21
VAMP3-202ENST00000470357 VWA5AO00534 786 aa7.52□□□□□ -1.21
VAMP3-202ENST00000470357 SPTLC2O15270 562 aa7.52□□□□□ -1.21
VAMP3-202ENST00000470357 PPP1R11O60927 126 aaPredicted RBP7.52□□□□□ -1.21
VAMP3-202ENST00000470357 GJB1P08034 283 aa7.52□□□□□ -1.21
VAMP3-202ENST00000470357 POLR2MP0CAP2 368 aa7.52□□□□□ -1.21
VAMP3-202ENST00000470357 GCFC2P16383 781 aaKnown RBP7.52□□□□□ -1.21
VAMP3-202ENST00000470357 ME1P48163 572 aa7.52□□□□□ -1.21
VAMP3-202ENST00000470357 EPHA4P54764 986 aa7.52□□□□□ -1.21
VAMP3-202ENST00000470357 PRMT2P55345 433 aa7.52□□□□□ -1.21
VAMP3-202ENST00000470357 PTK7Q13308 1070 aa7.52□□□□□ -1.21
VAMP3-202ENST00000470357 KLHL40Q2TBA0 621 aa7.52□□□□□ -1.21
VAMP3-202ENST00000470357 USH1GQ495M9 461 aa7.52□□□□□ -1.21
VAMP3-202ENST00000470357 TTC38Q5R3I4 469 aa7.52□□□□□ -1.21
VAMP3-202ENST00000470357 FAM173BQ6P4H8 233 aa7.52□□□□□ -1.21
VAMP3-202ENST00000470357 CCDC174Q6PII3 467 aa7.52□□□□□ -1.21
VAMP3-202ENST00000470357 LBX2Q6XYB7 198 aa7.52□□□□□ -1.21
VAMP3-202ENST00000470357 GADL1Q6ZQY3 521 aa7.52□□□□□ -1.21
VAMP3-202ENST00000470357 PIK3AP1Q6ZUJ8 805 aa7.52□□□□□ -1.21
VAMP3-202ENST00000470357 NEK8Q86SG6 692 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms