RNA–Protein interactions for RNA: ENST00000470188.5

CDHR3-207, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,199 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-207ENST00000470188 PABPC4Q13310 644 aaKnown RBP eCLIP22.15■■□□□ 1.14
CDHR3-207ENST00000470188 ICE2Q659A1 982 aa22.15■■□□□ 1.14
CDHR3-207ENST00000470188 ARHGAP27Q6ZUM4 889 aa22.15■■□□□ 1.14
CDHR3-207ENST00000470188 TMOD2Q9NZR1 351 aa22.15■■□□□ 1.14
CDHR3-207ENST00000470188 HERC5Q9UII4 1024 aaKnown RBP22.15■■□□□ 1.14
CDHR3-207ENST00000470188 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.15■■□□□ 1.14
CDHR3-207ENST00000470188 MSH4O15457 936 aa22.14■■□□□ 1.13
CDHR3-207ENST00000470188 CKAP4Q07065 602 aaKnown RBP22.14■■□□□ 1.13
CDHR3-207ENST00000470188 PPP4R3CPQ6ZMV5 832 aa22.14■■□□□ 1.13
CDHR3-207ENST00000470188 TRIM59Q8IWR1 403 aa22.14■■□□□ 1.13
CDHR3-207ENST00000470188 SYT2Q8N9I0 419 aaPredicted RBP22.14■■□□□ 1.13
CDHR3-207ENST00000470188 MMS19Q96T76 1030 aa22.14■■□□□ 1.13
CDHR3-207ENST00000470188 FAM107BQ9H098 131 aa22.14■■□□□ 1.13
CDHR3-207ENST00000470188 CEP72Q9P209 647 aa22.14■■□□□ 1.13
CDHR3-207ENST00000470188 TCP10L2B9ZVM9 353 aa22.14■■□□□ 1.13
CDHR3-207ENST00000470188 ZNF76P36508 570 aa22.14■■□□□ 1.13
CDHR3-207ENST00000470188 GIT2Q14161 759 aa22.14■■□□□ 1.13
CDHR3-207ENST00000470188 GPIHBP1Q8IV16 184 aa22.14■■□□□ 1.13
CDHR3-207ENST00000470188 TRIM58Q8NG06 486 aa22.14■■□□□ 1.13
CDHR3-207ENST00000470188 CAPZA3Q96KX2 299 aa22.14■■□□□ 1.13
CDHR3-207ENST00000470188 SH2D4AQ9H788 454 aa22.14■■□□□ 1.13
CDHR3-207ENST00000470188 YY1AP1Q9H869 796 aa22.14■■□□□ 1.13
CDHR3-207ENST00000470188 ARHGEF10LQ9HCE6 1279 aa22.14■■□□□ 1.13
CDHR3-207ENST00000470188 HPCAL4Q9UM19 191 aa22.14■■□□□ 1.13
CDHR3-207ENST00000470188 PIK3CDO00329 1044 aa22.13■■□□□ 1.13
CDHR3-207ENST00000470188 ECE1P42892 770 aa22.13■■□□□ 1.13
CDHR3-207ENST00000470188 STAT2P52630 851 aa22.13■■□□□ 1.13
CDHR3-207ENST00000470188 ADAM9Q13443 819 aa22.13■■□□□ 1.13
CDHR3-207ENST00000470188 EDRF1Q3B7T1 1238 aa22.13■■□□□ 1.13
CDHR3-207ENST00000470188 ZC3H3Q8IXZ2 948 aaKnown RBP22.13■■□□□ 1.13
CDHR3-207ENST00000470188 EFCAB13Q8IY85 973 aa22.13■■□□□ 1.13
CDHR3-207ENST00000470188 TACC1O75410 805 aa22.12■■□□□ 1.13
CDHR3-207ENST00000470188 CYP3A4P08684 503 aa22.12■■□□□ 1.13
CDHR3-207ENST00000470188 PLCD3Q8N3E9 789 aa22.12■■□□□ 1.13
CDHR3-207ENST00000470188 REEP2Q9BRK0 252 aa22.12■■□□□ 1.13
CDHR3-207ENST00000470188 LSM14BQ9BX40 385 aaKnown RBP22.12■■□□□ 1.13
CDHR3-207ENST00000470188 NUCKS1Q9H1E3 243 aaKnown RBP22.12■■□□□ 1.13
CDHR3-207ENST00000470188 NLRC4Q9NPP4 1024 aa22.12■■□□□ 1.13
CDHR3-207ENST00000470188 VAV3Q9UKW4 847 aa22.12■■□□□ 1.13
CDHR3-207ENST00000470188 FAM184BQ9ULE4 1060 aa22.12■■□□□ 1.13
CDHR3-207ENST00000470188 CPP00450 1065 aa22.12■■□□□ 1.13
CDHR3-207ENST00000470188 CASP5P51878 434 aa22.12■■□□□ 1.13
CDHR3-207ENST00000470188 DNAJC21Q5F1R6 531 aaKnown RBP22.12■■□□□ 1.13
CDHR3-207ENST00000470188 CYP2W1Q8TAV3 490 aa22.12■■□□□ 1.13
CDHR3-207ENST00000470188 COG1Q8WTW3 980 aa22.12■■□□□ 1.13
CDHR3-207ENST00000470188 JADE2Q9NQC1 790 aa22.12■■□□□ 1.13
CDHR3-207ENST00000470188 SSU72P8A0A1W2PR75 194 aa22.11■■□□□ 1.13
CDHR3-207ENST00000470188 SPDYE2BA6NHP3 402 aa22.11■■□□□ 1.13
CDHR3-207ENST00000470188 CETN3O15182 167 aa22.11■■□□□ 1.13
CDHR3-207ENST00000470188 C21orf2O43822 256 aa22.11■■□□□ 1.13
CDHR3-207ENST00000470188 NOL4O94818 638 aa22.11■■□□□ 1.13
CDHR3-207ENST00000470188 SPDYE6P0CI01 402 aa22.11■■□□□ 1.13
CDHR3-207ENST00000470188 CYP4A11Q02928 519 aa22.11■■□□□ 1.13
CDHR3-207ENST00000470188 FAM83BQ5T0W9 1011 aa22.11■■□□□ 1.13
CDHR3-207ENST00000470188 SFR1Q86XK3 245 aa22.11■■□□□ 1.13
CDHR3-207ENST00000470188 ZFP91Q96JP5 570 aaPredicted RBP22.11■■□□□ 1.13
CDHR3-207ENST00000470188 JRKLQ9Y4A0 524 aa22.11■■□□□ 1.13
CDHR3-207ENST00000470188 CAPN6Q9Y6Q1 641 aa22.11■■□□□ 1.13
CDHR3-207ENST00000470188 CLRN2A0PK11 232 aa22.11■■□□□ 1.13
CDHR3-207ENST00000470188 MAGEA1P43355 309 aa22.11■■□□□ 1.13
CDHR3-207ENST00000470188 TRAF1Q13077 416 aa22.11■■□□□ 1.13
CDHR3-207ENST00000470188 ASTE1Q2TB18 679 aaPredicted RBP22.11■■□□□ 1.13
CDHR3-207ENST00000470188 TDRD12Q587J7 1177 aaKnown RBP22.11■■□□□ 1.13
CDHR3-207ENST00000470188 PACS2Q86VP3 889 aa22.11■■□□□ 1.13
CDHR3-207ENST00000470188 CAGE1Q8TC20 777 aa22.11■■□□□ 1.13
CDHR3-207ENST00000470188 SYN2Q92777 582 aaPredicted RBP22.11■■□□□ 1.13
CDHR3-207ENST00000470188 MLXIPQ9HAP2 919 aa22.11■■□□□ 1.13
CDHR3-207ENST00000470188 NR2F2P24468 414 aa22.1■■□□□ 1.13
CDHR3-207ENST00000470188 EPS15P42566 896 aa22.1■■□□□ 1.13
CDHR3-207ENST00000470188 POLR2FP61218 127 aaKnown RBP22.1■■□□□ 1.13
CDHR3-207ENST00000470188 SLC9C1Q4G0N8 1177 aa22.1■■□□□ 1.13
CDHR3-207ENST00000470188 SFMBT2Q5VUG0 894 aa22.1■■□□□ 1.13
CDHR3-207ENST00000470188 HGSNATQ68CP4 663 aa22.1■■□□□ 1.13
CDHR3-207ENST00000470188 ACER1Q8TDN7 264 aa22.1■■□□□ 1.13
CDHR3-207ENST00000470188 CRACR2AQ9BSW2 395 aa22.1■■□□□ 1.13
CDHR3-207ENST00000470188 GOPCQ9HD26 462 aa22.1■■□□□ 1.13
CDHR3-207ENST00000470188 MOCS3O95396 460 aa22.09■■□□□ 1.13
CDHR3-207ENST00000470188 GTF2A1P52655 376 aaPredicted RBP22.09■■□□□ 1.13
CDHR3-207ENST00000470188 GFPT1Q06210 699 aaPredicted RBP22.09■■□□□ 1.13
CDHR3-207ENST00000470188 KIAA1755Q5JYT7 1200 aa22.09■■□□□ 1.13
CDHR3-207ENST00000470188 EIF2AK1Q9BQI3 630 aaKnown RBP22.09■■□□□ 1.13
CDHR3-207ENST00000470188 POLR3CQ9BUI4 534 aaPredicted RBP22.09■■□□□ 1.13
CDHR3-207ENST00000470188 TMX2Q9Y320 296 aa22.09■■□□□ 1.13
CDHR3-207ENST00000470188 ZC3H4Q9UPT8 1303 aaKnown RBP22.09■■□□□ 1.13
CDHR3-207ENST00000470188 ZNF185O15231 689 aa22.09■■□□□ 1.13
CDHR3-207ENST00000470188 SHOX2O60902 331 aaPredicted RBP22.09■■□□□ 1.13
CDHR3-207ENST00000470188 KNOP1Q1ED39 458 aaKnown RBP22.09■■□□□ 1.13
CDHR3-207ENST00000470188 RSBN1LQ6PCB5 846 aaPredicted RBP22.09■■□□□ 1.13
CDHR3-207ENST00000470188 EPM2AIP1Q7L775 607 aaPredicted RBP22.09■■□□□ 1.13
CDHR3-207ENST00000470188 ALS2CR12Q96Q35 445 aa22.09■■□□□ 1.13
CDHR3-207ENST00000470188 BHMT2Q9H2M3 363 aa22.09■■□□□ 1.13
CDHR3-207ENST00000470188 SNX12Q9UMY4 172 aa22.09■■□□□ 1.13
CDHR3-207ENST00000470188 TRAF3IP3Q9Y228 551 aa22.09■■□□□ 1.13
CDHR3-207ENST00000470188 IGLV3-22A0A075B6J6 115 aa22.08■■□□□ 1.13
CDHR3-207ENST00000470188 PJA2O43164 708 aa22.08■■□□□ 1.13
CDHR3-207ENST00000470188 CFBP00751 764 aa22.08■■□□□ 1.13
CDHR3-207ENST00000470188 SERPING1P05155 500 aa22.08■■□□□ 1.13
CDHR3-207ENST00000470188 DEFB132Q7Z7B7 95 aa22.08■■□□□ 1.13
CDHR3-207ENST00000470188 FAM151AQ8WW52 585 aa22.08■■□□□ 1.13
CDHR3-207ENST00000470188 RNF216Q9NWF9 866 aaPredicted RBP22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms