RNA–Protein interactions for RNA: ENST00000470068.2

CCDC144A-212, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-212ENST00000470068 ASAP2O43150 1006 aa6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 KIF1CO43896 1103 aaKnown RBP6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 CHEK2O96017 543 aa6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 AFPP02771 609 aaKnown RBP6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 GNAT1P11488 350 aa6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 MRPS25P82663 173 aaKnown RBP6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 BIRC2Q13490 618 aa6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 MED21Q13503 144 aa6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 KCNB1Q14721 858 aa6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 MIS18BP1Q6P0N0 1132 aa6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 USP50Q70EL3 339 aaPredicted RBP6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 FBXO11Q86XK2 927 aa6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 MARCH10Q8NA82 808 aaPredicted RBP6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 TRIM33Q9UPN9 1127 aa6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 ITIH6Q6UXX5 1313 aa6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 CALB1P05937 261 aa6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 INHBEP58166 350 aa6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 MAP3K10Q02779 954 aa6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 TRIM50Q86XT4 487 aa6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 TERB1Q8NA31 727 aa6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 KRT12Q99456 494 aa6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 PARK7Q99497 189 aaKnown RBP6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 DDX50Q9BQ39 737 aaKnown RBP6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 TBC1D22BQ9NU19 505 aa6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 WDR35Q9P2L0 1181 aa6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 PPP2R2CQ9Y2T4 447 aa6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 MAP3K4Q9Y6R4 1608 aa6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 POTEB3A0JP26 581 aa6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 KPNA7A9QM74 516 aa6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 SLC16A3O15427 465 aaKnown RBP6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 RPN1P04843 607 aaKnown RBP6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 DHX34Q14147 1143 aaKnown RBP6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 POLA2Q14181 598 aa6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 SNCBQ16143 134 aa6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 LONRF2Q1L5Z9 754 aa6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 KRT71Q3SY84 523 aa6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 C20orf194Q5TEA3 1177 aa6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 POTEBQ6S5H4 581 aa6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 LRRC8CQ8TDW0 803 aa6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 P2RX5Q93086 422 aa6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 CMTM5Q96DZ9 223 aa6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 ANKRD36BP1Q96IX9 119 aa6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 PHACTR1Q9C0D0 580 aa6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 OSBPL5Q9H0X9 879 aaPredicted RBP6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 LRFN2Q9ULH4 789 aa6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 PCDHA12Q9UN75 941 aa6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 CEP104O60308 925 aa6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 EFCAB14O75071 495 aa6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 SNUPNO95149 360 aaKnown RBP6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 TAC1P20366 129 aa6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 PSMA3P25788 255 aa6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 PSMA4P25789 261 aaKnown RBP6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 PSMC4P43686 418 aa6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 COPB1P53618 953 aaKnown RBP6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 GUCY1B3Q02153 619 aa6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 LETM2Q2VYF4 491 aa6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 ARL13BQ3SXY8 428 aa6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 SEPT14Q6ZU15 432 aa6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 TADA2BQ86TJ2 420 aa6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 LRRC8AQ8IWT6 810 aa6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 ATL2Q8NHH9 583 aa6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 TRIM56Q9BRZ2 755 aaKnown RBP6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 MTMR6Q9Y217 621 aa6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 JAG2Q9Y219 1238 aa6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 IQSEC2Q5JU85 1478 aa6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 GAS2O43903 313 aaKnown RBP6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 SRGAP2CP0DJJ0 459 aa6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 CTNNA1P35221 906 aaKnown RBP6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 EIF2B5Q13144 721 aaKnown RBP6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 CCDC157Q569K6 752 aa6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 KLC3Q6P597 504 aa6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 SYN2Q92777 582 aaPredicted RBP6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 TMEM60Q9H2L4 133 aa6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 MRPL44Q9H9J2 332 aaKnown RBP6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 MPP6Q9NZW5 540 aa6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 ITGB1BP2Q9UKP3 347 aa6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 AP3M1Q9Y2T2 418 aa6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 MORC2Q9Y6X9 1032 aaPredicted RBP6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 SRRM3A6NNA2 597 aaPredicted RBP6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 M0R3G1 203 aa6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 RIOK3O14730 519 aaKnown RBP6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 POLR2DO15514 142 aaKnown RBP6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 CCNT1O60563 726 aaKnown RBP6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 GTF2IP78347 998 aa6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 CCDC25Q86WR0 208 aa6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 NME8Q8N427 588 aa6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 MYCT1Q8N699 235 aa6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 PLA2G12BQ9BX93 195 aa6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 UPF3AQ9H1J1 476 aaKnown RBP6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 ELP3Q9H9T3 547 aa6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 SPATS2LQ9NUQ6 558 aaKnown RBP6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 PSD3Q9NYI0 1048 aa6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 ARHGAP26Q9UNA1 814 aa6.62□□□□□ -1.35
CCDC144A-212ENST00000470068 FLT1P17948 1338 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 PRAMEF22A3QJZ6 481 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 MYO1FO00160 1098 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 MTSS1O43312 755 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 HEXIM1O94992 359 aaKnown RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms