RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 PANK2Q9BZ23 570 aa19.95■□□□□ 0.78
MRPL28-208ENST00000469744 JADE2Q9NQC1 790 aa19.95■□□□□ 0.78
MRPL28-208ENST00000469744 CHD7Q9P2D1 2997 aa19.95■□□□□ 0.78
MRPL28-208ENST00000469744 SYCE3A1L190 88 aa19.94■□□□□ 0.78
MRPL28-208ENST00000469744 SELPP16109 830 aa19.94■□□□□ 0.78
MRPL28-208ENST00000469744 RFC2P35250 354 aa19.94■□□□□ 0.78
MRPL28-208ENST00000469744 TCF7P36402 384 aaPredicted RBP19.94■□□□□ 0.78
MRPL28-208ENST00000469744 CLK2P49760 499 aaKnown RBP19.94■□□□□ 0.78
MRPL28-208ENST00000469744 PTK7Q13308 1070 aa19.94■□□□□ 0.78
MRPL28-208ENST00000469744 GPNMBQ14956 572 aa19.94■□□□□ 0.78
MRPL28-208ENST00000469744 NTRK3Q16288 839 aa19.94■□□□□ 0.78
MRPL28-208ENST00000469744 TRIM71Q2Q1W2 868 aaKnown RBP19.94■□□□□ 0.78
MRPL28-208ENST00000469744 FERMT3Q86UX7 667 aa19.94■□□□□ 0.78
MRPL28-208ENST00000469744 CDHR1Q96JP9 859 aa19.94■□□□□ 0.78
MRPL28-208ENST00000469744 SLC26A6Q9BXS9 759 aa19.94■□□□□ 0.78
MRPL28-208ENST00000469744 A0A0C4DFX4 3053 aa19.93■□□□□ 0.78
MRPL28-208ENST00000469744 C17orf102A2RUQ5 167 aa19.93■□□□□ 0.78
MRPL28-208ENST00000469744 PRPF3O43395 683 aaKnown RBP19.93■□□□□ 0.78
MRPL28-208ENST00000469744 FOSP01100 380 aaPredicted RBP19.93■□□□□ 0.78
MRPL28-208ENST00000469744 GRIN2CQ14957 1233 aa19.93■□□□□ 0.78
MRPL28-208ENST00000469744 GIMAP8Q8ND71 665 aaPredicted RBP19.93■□□□□ 0.78
MRPL28-208ENST00000469744 ANP32BQ92688 251 aaKnown RBP19.93■□□□□ 0.78
MRPL28-208ENST00000469744 ATP6V0A1Q93050 837 aa19.93■□□□□ 0.78
MRPL28-208ENST00000469744 PPP1R9BQ96SB3 815 aa19.93■□□□□ 0.78
MRPL28-208ENST00000469744 MXRA8Q9BRK3 442 aa19.93■□□□□ 0.78
MRPL28-208ENST00000469744 TSPY26PQ9H489 355 aa19.93■□□□□ 0.78
MRPL28-208ENST00000469744 RNPEPQ9H4A4 650 aa19.93■□□□□ 0.78
MRPL28-208ENST00000469744 ZNF576Q9H609 170 aa19.93■□□□□ 0.78
MRPL28-208ENST00000469744 KCNH7Q9NS40 1196 aa19.93■□□□□ 0.78
MRPL28-208ENST00000469744 SETD4Q9NVD3 440 aa19.93■□□□□ 0.78
MRPL28-208ENST00000469744 YBX2Q9Y2T7 364 aaKnown RBP19.93■□□□□ 0.78
MRPL28-208ENST00000469744 PRUNE2Q8WUY3 3088 aa19.93■□□□□ 0.78
MRPL28-208ENST00000469744 KAT6AQ92794 2004 aa19.93■□□□□ 0.78
MRPL28-208ENST00000469744 TMEM265A0A087WTH1 108 aa19.92■□□□□ 0.78
MRPL28-208ENST00000469744 TREHO43280 583 aa19.92■□□□□ 0.78
MRPL28-208ENST00000469744 CDKL5O76039 1030 aa19.92■□□□□ 0.78
MRPL28-208ENST00000469744 ARP10275 920 aa19.92■□□□□ 0.78
MRPL28-208ENST00000469744 MYOGP15173 224 aa19.92■□□□□ 0.78
MRPL28-208ENST00000469744 AKAP17AQ02040 695 aaKnown RBP19.92■□□□□ 0.78
MRPL28-208ENST00000469744 RBL2Q08999 1139 aa19.92■□□□□ 0.78
MRPL28-208ENST00000469744 CCDC173Q0VFZ6 552 aa19.92■□□□□ 0.78
MRPL28-208ENST00000469744 AP3B2Q13367 1082 aa19.92■□□□□ 0.78
MRPL28-208ENST00000469744 ZNF618Q5T7W0 954 aa19.92■□□□□ 0.78
MRPL28-208ENST00000469744 SERINC5Q86VE9 423 aa19.92■□□□□ 0.78
MRPL28-208ENST00000469744 LEO1Q8WVC0 666 aaPredicted RBP19.92■□□□□ 0.78
MRPL28-208ENST00000469744 RBSNQ9H1K0 784 aa19.92■□□□□ 0.78
MRPL28-208ENST00000469744 NKX2-4Q9H2Z4 354 aa19.92■□□□□ 0.78
MRPL28-208ENST00000469744 ZNF215Q9UL58 517 aaPredicted RBP19.92■□□□□ 0.78
MRPL28-208ENST00000469744 PTPRSQ13332 1948 aa19.92■□□□□ 0.78
MRPL28-208ENST00000469744 GSTTP1A0A1W2PQM5 241 aa19.92■□□□□ 0.78
MRPL28-208ENST00000469744 NBNO60934 754 aa19.92■□□□□ 0.78
MRPL28-208ENST00000469744 DTNBO60941 627 aa19.92■□□□□ 0.78
MRPL28-208ENST00000469744 ACTN1P12814 892 aa19.92■□□□□ 0.78
MRPL28-208ENST00000469744 FDPSP14324 419 aaKnown RBP19.92■□□□□ 0.78
MRPL28-208ENST00000469744 ATP2A2P16615 1042 aaKnown RBP19.92■□□□□ 0.78
MRPL28-208ENST00000469744 MARK3P27448 753 aa19.92■□□□□ 0.78
MRPL28-208ENST00000469744 SREBF1P36956 1147 aa19.92■□□□□ 0.78
MRPL28-208ENST00000469744 THPOP40225 353 aa19.92■□□□□ 0.78
MRPL28-208ENST00000469744 CPLX2Q6PUV4 134 aaKnown RBP19.92■□□□□ 0.78
MRPL28-208ENST00000469744 TRAF7Q6Q0C0 670 aa19.92■□□□□ 0.78
MRPL28-208ENST00000469744 SPATA32Q96LK8 384 aa19.92■□□□□ 0.78
MRPL28-208ENST00000469744 ZNF396Q96N95 335 aaPredicted RBP19.92■□□□□ 0.78
MRPL28-208ENST00000469744 UIMC1Q96RL1 719 aa19.92■□□□□ 0.78
MRPL28-208ENST00000469744 MSRAQ9UJ68 235 aa19.92■□□□□ 0.78
MRPL28-208ENST00000469744 UNC80Q8N2C7 3258 aa19.92■□□□□ 0.78
MRPL28-208ENST00000469744 IFNAR1P17181 557 aa19.91■□□□□ 0.78
MRPL28-208ENST00000469744 HOXC8P31273 242 aa19.91■□□□□ 0.78
MRPL28-208ENST00000469744 ARHGAP4P98171 946 aa19.91■□□□□ 0.78
MRPL28-208ENST00000469744 MBTPS1Q14703 1052 aa19.91■□□□□ 0.78
MRPL28-208ENST00000469744 TCTN1Q2MV58 587 aa19.91■□□□□ 0.78
MRPL28-208ENST00000469744 CEP55Q53EZ4 464 aa19.91■□□□□ 0.78
MRPL28-208ENST00000469744 RASGRP4Q8TDF6 673 aa19.91■□□□□ 0.78
MRPL28-208ENST00000469744 SEPT1Q8WYJ6 367 aa19.91■□□□□ 0.78
MRPL28-208ENST00000469744 RNF26Q9BY78 433 aaPredicted RBP19.91■□□□□ 0.78
MRPL28-208ENST00000469744 ZMYND12Q9H0C1 365 aa19.91■□□□□ 0.78
MRPL28-208ENST00000469744 GLT8D2Q9H1C3 349 aa19.91■□□□□ 0.78
MRPL28-208ENST00000469744 JPH1Q9HDC5 661 aaPredicted RBP19.91■□□□□ 0.78
MRPL28-208ENST00000469744 VPS54Q9P1Q0 977 aa19.91■□□□□ 0.78
MRPL28-208ENST00000469744 ESYT2A0FGR8 921 aa19.9■□□□□ 0.78
MRPL28-208ENST00000469744 CPLX1O14810 134 aa19.9■□□□□ 0.78
MRPL28-208ENST00000469744 ZNF76P36508 570 aa19.9■□□□□ 0.78
MRPL28-208ENST00000469744 ITGB3BPQ13352 177 aaPredicted RBP19.9■□□□□ 0.78
MRPL28-208ENST00000469744 RAB30Q15771 203 aa19.9■□□□□ 0.78
MRPL28-208ENST00000469744 REXO1Q8N1G1 1221 aaKnown RBP19.9■□□□□ 0.78
MRPL28-208ENST00000469744 SLC17A8Q8NDX2 589 aa19.9■□□□□ 0.78
MRPL28-208ENST00000469744 LMBR1Q8WVP7 490 aa19.9■□□□□ 0.78
MRPL28-208ENST00000469744 C6orf50Q9HD87 102 aa19.9■□□□□ 0.78
MRPL28-208ENST00000469744 RCOR1Q9UKL0 485 aa19.9■□□□□ 0.78
MRPL28-208ENST00000469744 CTSHP09668 335 aa19.89■□□□□ 0.77
MRPL28-208ENST00000469744 FOSL2P15408 326 aa19.89■□□□□ 0.77
MRPL28-208ENST00000469744 TEX2Q8IWB9 1127 aa19.89■□□□□ 0.77
MRPL28-208ENST00000469744 CCDC12Q8WUD4 166 aaPredicted RBP19.89■□□□□ 0.77
MRPL28-208ENST00000469744 GLG1Q92896 1179 aa19.89■□□□□ 0.77
MRPL28-208ENST00000469744 AGO4Q9HCK5 861 aaKnown RBP19.89■□□□□ 0.77
MRPL28-208ENST00000469744 ORC3Q9UBD5 711 aaPredicted RBP19.89■□□□□ 0.77
MRPL28-208ENST00000469744 SLC9A2Q9UBY0 812 aa19.89■□□□□ 0.77
MRPL28-208ENST00000469744 FAM86B1E9PN63 330 aa19.88■□□□□ 0.77
MRPL28-208ENST00000469744 DDX39AO00148 427 aaKnown RBP19.88■□□□□ 0.77
MRPL28-208ENST00000469744 MEIS1O00470 390 aa19.88■□□□□ 0.77
MRPL28-208ENST00000469744 MAFGO15525 162 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms