RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 POF1BQ8WVV4 589 aa21.06■□□□□ 0.96
TTC28-205ENST00000469670 AGO3Q9H9G7 860 aaKnown RBP21.06■□□□□ 0.96
TTC28-205ENST00000469670 TUBE1Q9UJT0 475 aa21.06■□□□□ 0.96
TTC28-205ENST00000469670 BARX2Q9UMQ3 279 aaPredicted RBP21.06■□□□□ 0.96
TTC28-205ENST00000469670 USP15Q9Y4E8 981 aaPredicted RBP21.06■□□□□ 0.96
TTC28-205ENST00000469670 CYTH3O43739 400 aa21.05■□□□□ 0.96
TTC28-205ENST00000469670 GLP2RO95838 553 aa21.05■□□□□ 0.96
TTC28-205ENST00000469670 CD52P31358 61 aa21.05■□□□□ 0.96
TTC28-205ENST00000469670 TCF7P36402 384 aaPredicted RBP21.05■□□□□ 0.96
TTC28-205ENST00000469670 SIGLEC14Q08ET2 396 aa21.05■□□□□ 0.96
TTC28-205ENST00000469670 HDAC1Q13547 482 aaPredicted RBP21.05■□□□□ 0.96
TTC28-205ENST00000469670 GRIK4Q16099 956 aa21.05■□□□□ 0.96
TTC28-205ENST00000469670 NPAS4Q8IUM7 802 aa21.05■□□□□ 0.96
TTC28-205ENST00000469670 CRIPAKQ8N1N5 446 aa21.05■□□□□ 0.96
TTC28-205ENST00000469670 PHF7Q9BWX1 381 aaPredicted RBP21.05■□□□□ 0.96
TTC28-205ENST00000469670 FAM86C1Q9NVL1 165 aa21.05■□□□□ 0.96
TTC28-205ENST00000469670 USP34Q70CQ2 3546 aa21.05■□□□□ 0.96
TTC28-205ENST00000469670 MBLAC1A4D2B0 266 aaPredicted RBP21.04■□□□□ 0.96
TTC28-205ENST00000469670 GFRA3O60609 400 aa21.04■□□□□ 0.96
TTC28-205ENST00000469670 MARK3P27448 753 aa21.04■□□□□ 0.96
TTC28-205ENST00000469670 PAN2Q504Q3 1202 aaKnown RBP21.04■□□□□ 0.96
TTC28-205ENST00000469670 MARCH8Q5T0T0 291 aa21.04■□□□□ 0.96
TTC28-205ENST00000469670 PCNX4Q63HM2 1172 aa21.04■□□□□ 0.96
TTC28-205ENST00000469670 RTN4RL1Q86UN2 441 aaPredicted RBP21.04■□□□□ 0.96
TTC28-205ENST00000469670 NLRX1Q86UT6 975 aa21.04■□□□□ 0.96
TTC28-205ENST00000469670 GIMAP8Q8ND71 665 aaPredicted RBP21.04■□□□□ 0.96
TTC28-205ENST00000469670 RPGRIP1Q96KN7 1286 aa21.04■□□□□ 0.96
TTC28-205ENST00000469670 FTHL17Q9BXU8 183 aa21.04■□□□□ 0.96
TTC28-205ENST00000469670 VCPP55072 806 aaKnown RBP21.03■□□□□ 0.96
TTC28-205ENST00000469670 MRPS6P82932 125 aaKnown RBP21.03■□□□□ 0.96
TTC28-205ENST00000469670 XRRA1Q6P2D8 792 aa21.03■□□□□ 0.96
TTC28-205ENST00000469670 ERAP1Q9NZ08 941 aa21.03■□□□□ 0.96
TTC28-205ENST00000469670 PCDHGC5Q9Y5F6 944 aa21.03■□□□□ 0.96
TTC28-205ENST00000469670 TTC3P53804 2025 aa21.02■□□□□ 0.96
TTC28-205ENST00000469670 HIP1O00291 1037 aa21.02■□□□□ 0.96
TTC28-205ENST00000469670 STAG3L1P0CL83 205 aa21.02■□□□□ 0.96
TTC28-205ENST00000469670 SMARCC2Q8TAQ2 1214 aa21.02■□□□□ 0.96
TTC28-205ENST00000469670 SEPT1Q8WYJ6 367 aa21.02■□□□□ 0.96
TTC28-205ENST00000469670 TLE6Q9H808 572 aa21.02■□□□□ 0.96
TTC28-205ENST00000469670 SQORQ9Y6N5 450 aa21.02■□□□□ 0.96
TTC28-205ENST00000469670 GSTTP1A0A1W2PQM5 241 aa21.01■□□□□ 0.95
TTC28-205ENST00000469670 ATP9AO75110 1047 aa21.01■□□□□ 0.95
TTC28-205ENST00000469670 RPLP2P05387 115 aaKnown RBP21.01■□□□□ 0.95
TTC28-205ENST00000469670 IGBP1P78318 339 aa21.01■□□□□ 0.95
TTC28-205ENST00000469670 IER5Q5VY09 327 aa21.01■□□□□ 0.95
TTC28-205ENST00000469670 USP17L6PQ6QN14 398 aa21.01■□□□□ 0.95
TTC28-205ENST00000469670 PIBF1Q8WXW3 757 aa21.01■□□□□ 0.95
TTC28-205ENST00000469670 GLG1Q92896 1179 aa21.01■□□□□ 0.95
TTC28-205ENST00000469670 CUL5Q93034 780 aa21.01■□□□□ 0.95
TTC28-205ENST00000469670 ZBTB10Q96DT7 871 aa21.01■□□□□ 0.95
TTC28-205ENST00000469670 ASIC4Q96FT7 647 aa21.01■□□□□ 0.95
TTC28-205ENST00000469670 FAM49AQ9H0Q0 323 aaPredicted RBP21.01■□□□□ 0.95
TTC28-205ENST00000469670 IRF2BPLQ9H1B7 796 aa21.01■□□□□ 0.95
TTC28-205ENST00000469670 ZDBF2Q9HCK1 2354 aa21■□□□□ 0.95
TTC28-205ENST00000469670 PPFIA3O75145 1194 aa21■□□□□ 0.95
TTC28-205ENST00000469670 SCG2P13521 617 aa21■□□□□ 0.95
TTC28-205ENST00000469670 KCNA2P16389 499 aa21■□□□□ 0.95
TTC28-205ENST00000469670 ATF7P17544 494 aaPredicted RBP21■□□□□ 0.95
TTC28-205ENST00000469670 AVPR2P30518 371 aa21■□□□□ 0.95
TTC28-205ENST00000469670 GATMP50440 423 aa21■□□□□ 0.95
TTC28-205ENST00000469670 MICAL1Q8TDZ2 1067 aa21■□□□□ 0.95
TTC28-205ENST00000469670 SUSD6Q92537 303 aa21■□□□□ 0.95
TTC28-205ENST00000469670 ATOH1Q92858 354 aaPredicted RBP21■□□□□ 0.95
TTC28-205ENST00000469670 GPRASP2Q96D09 838 aa21■□□□□ 0.95
TTC28-205ENST00000469670 SMARCAD1Q9H4L7 1026 aa21■□□□□ 0.95
TTC28-205ENST00000469670 SENP2Q9HC62 589 aa21■□□□□ 0.95
TTC28-205ENST00000469670 PADI3Q9ULW8 664 aa21■□□□□ 0.95
TTC28-205ENST00000469670 TRPV2Q9Y5S1 764 aa21■□□□□ 0.95
TTC28-205ENST00000469670 DOCK5Q9H7D0 1870 aa20.99■□□□□ 0.95
TTC28-205ENST00000469670 PER2O15055 1255 aa20.99■□□□□ 0.95
TTC28-205ENST00000469670 RBM10P98175 930 aaKnown RBP20.99■□□□□ 0.95
TTC28-205ENST00000469670 TROAPQ12815 778 aa20.99■□□□□ 0.95
TTC28-205ENST00000469670 TRDNQ13061 729 aa20.99■□□□□ 0.95
TTC28-205ENST00000469670 PLEKHM2Q8IWE5 1019 aa20.99■□□□□ 0.95
TTC28-205ENST00000469670 ATP8B4Q8TF62 1192 aa20.99■□□□□ 0.95
TTC28-205ENST00000469670 CDHR1Q96JP9 859 aa20.99■□□□□ 0.95
TTC28-205ENST00000469670 OSBPL3Q9H4L5 887 aa20.99■□□□□ 0.95
TTC28-205ENST00000469670 LRFN2Q9ULH4 789 aa20.99■□□□□ 0.95
TTC28-205ENST00000469670 RRN3P2A6NIE6 340 aa20.98■□□□□ 0.95
TTC28-205ENST00000469670 M0QZ92 97 aa20.98■□□□□ 0.95
TTC28-205ENST00000469670 PIK3CDO00329 1044 aa20.98■□□□□ 0.95
TTC28-205ENST00000469670 MEIS2O14770 477 aa20.98■□□□□ 0.95
TTC28-205ENST00000469670 IFIT3O14879 490 aaKnown RBP20.98■□□□□ 0.95
TTC28-205ENST00000469670 INSRRP14616 1297 aa20.98■□□□□ 0.95
TTC28-205ENST00000469670 UBE3AQ05086 875 aa20.98■□□□□ 0.95
TTC28-205ENST00000469670 TMEM62Q0P6H9 643 aa20.98■□□□□ 0.95
TTC28-205ENST00000469670 PAK2Q13177 524 aa20.98■□□□□ 0.95
TTC28-205ENST00000469670 PTPN21Q16825 1174 aa20.98■□□□□ 0.95
TTC28-205ENST00000469670 B4GALNT3Q6L9W6 998 aa20.98■□□□□ 0.95
TTC28-205ENST00000469670 VN1R2Q8NFZ6 395 aa20.98■□□□□ 0.95
TTC28-205ENST00000469670 ZFHX2Q9C0A1 2572 aaPredicted RBP20.97■□□□□ 0.95
TTC28-205ENST00000469670 KMT2EQ8IZD2 1858 aa20.97■□□□□ 0.95
TTC28-205ENST00000469670 ERICH2A1L162 156 aa20.97■□□□□ 0.95
TTC28-205ENST00000469670 IBSPP21815 317 aaPredicted RBP20.97■□□□□ 0.95
TTC28-205ENST00000469670 SPOUT1Q5T280 376 aaKnown RBP20.97■□□□□ 0.95
TTC28-205ENST00000469670 NEK1Q96PY6 1258 aa20.97■□□□□ 0.95
TTC28-205ENST00000469670 CDCA3Q99618 268 aaPredicted RBP20.97■□□□□ 0.95
TTC28-205ENST00000469670 TLR9Q9NR96 1032 aa20.97■□□□□ 0.95
TTC28-205ENST00000469670 PKD2L1Q9P0L9 805 aa20.97■□□□□ 0.95
TTC28-205ENST00000469670 PCDHB12Q9Y5F1 795 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms