RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 POTEB3A0JP26 581 aa14.07□□□□□ -0.16
HDAC3-204ENST00000469207 ARP10275 920 aa14.07□□□□□ -0.16
HDAC3-204ENST00000469207 CD52P31358 61 aa14.07□□□□□ -0.16
HDAC3-204ENST00000469207 GNAQP50148 359 aa14.07□□□□□ -0.16
HDAC3-204ENST00000469207 NECTIN1Q15223 517 aa14.07□□□□□ -0.16
HDAC3-204ENST00000469207 FBXO47Q5MNV8 452 aa14.07□□□□□ -0.16
HDAC3-204ENST00000469207 CREB3L3Q68CJ9 461 aa14.07□□□□□ -0.16
HDAC3-204ENST00000469207 POTEBQ6S5H4 581 aa14.07□□□□□ -0.16
HDAC3-204ENST00000469207 HEATR3Q7Z4Q2 680 aa14.07□□□□□ -0.16
HDAC3-204ENST00000469207 RPAINQ86UA6 219 aa14.07□□□□□ -0.16
HDAC3-204ENST00000469207 GIMAP8Q8ND71 665 aaPredicted RBP14.07□□□□□ -0.16
HDAC3-204ENST00000469207 TMEM87BQ96K49 555 aa14.07□□□□□ -0.16
HDAC3-204ENST00000469207 TCEANC2Q96MN5 208 aa14.07□□□□□ -0.16
HDAC3-204ENST00000469207 UIMC1Q96RL1 719 aa14.07□□□□□ -0.16
HDAC3-204ENST00000469207 NSUN3Q9H649 340 aaKnown RBP14.07□□□□□ -0.16
HDAC3-204ENST00000469207 IGFLR1Q9H665 355 aa14.07□□□□□ -0.16
HDAC3-204ENST00000469207 RC3H2Q9HBD1 1191 aaKnown RBP14.07□□□□□ -0.16
HDAC3-204ENST00000469207 ALG13Q9NP73 1137 aaKnown RBP14.07□□□□□ -0.16
HDAC3-204ENST00000469207 JADE2Q9NQC1 790 aa14.07□□□□□ -0.16
HDAC3-204ENST00000469207 ERAP1Q9NZ08 941 aa14.07□□□□□ -0.16
HDAC3-204ENST00000469207 SLC12A7Q9Y666 1083 aa14.07□□□□□ -0.16
HDAC3-204ENST00000469207 NLRC5Q86WI3 1866 aa14.06□□□□□ -0.16
HDAC3-204ENST00000469207 MBLAC1A4D2B0 266 aaPredicted RBP14.06□□□□□ -0.16
HDAC3-204ENST00000469207 SPDYE3A6NKU9 549 aa14.06□□□□□ -0.16
HDAC3-204ENST00000469207 LINC01565O15544 149 aa14.06□□□□□ -0.16
HDAC3-204ENST00000469207 IBSPP21815 317 aaPredicted RBP14.06□□□□□ -0.16
HDAC3-204ENST00000469207 LIFRP42702 1097 aa14.06□□□□□ -0.16
HDAC3-204ENST00000469207 HYAL1Q12794 435 aa14.06□□□□□ -0.16
HDAC3-204ENST00000469207 CAMK1Q14012 370 aa14.06□□□□□ -0.16
HDAC3-204ENST00000469207 TAF2Q6P1X5 1199 aa14.06□□□□□ -0.16
HDAC3-204ENST00000469207 TMTC3Q6ZXV5 915 aa14.06□□□□□ -0.16
HDAC3-204ENST00000469207 MICU3Q86XE3 530 aa14.06□□□□□ -0.16
HDAC3-204ENST00000469207 TMTC2Q8N394 836 aa14.06□□□□□ -0.16
HDAC3-204ENST00000469207 ZNF689Q96CS4 500 aaPredicted RBP14.06□□□□□ -0.16
HDAC3-204ENST00000469207 PABPC5Q96DU9 382 aaKnown RBP14.06□□□□□ -0.16
HDAC3-204ENST00000469207 SMARCAD1Q9H4L7 1026 aa14.06□□□□□ -0.16
HDAC3-204ENST00000469207 KCNH7Q9NS40 1196 aa14.06□□□□□ -0.16
HDAC3-204ENST00000469207 C5orf42Q9H799 3197 aa14.05□□□□□ -0.16
HDAC3-204ENST00000469207 GATMP50440 423 aa14.05□□□□□ -0.16
HDAC3-204ENST00000469207 BTG3Q14201 252 aaPredicted RBP14.05□□□□□ -0.16
HDAC3-204ENST00000469207 PLCB4Q15147 1175 aa14.05□□□□□ -0.16
HDAC3-204ENST00000469207 TIGD5Q53EQ6 642 aa14.05□□□□□ -0.16
HDAC3-204ENST00000469207 WWC2Q6AWC2 1192 aa14.05□□□□□ -0.16
HDAC3-204ENST00000469207 CDHR1Q96JP9 859 aa14.05□□□□□ -0.16
HDAC3-204ENST00000469207 MXRA8Q9BRK3 442 aa14.05□□□□□ -0.16
HDAC3-204ENST00000469207 ESYT1Q9BSJ8 1104 aa14.05□□□□□ -0.16
HDAC3-204ENST00000469207 MTA3Q9BTC8 594 aa14.05□□□□□ -0.16
HDAC3-204ENST00000469207 TMEM260Q9NX78 707 aa14.05□□□□□ -0.16
HDAC3-204ENST00000469207 SLC9A2Q9UBY0 812 aa14.05□□□□□ -0.16
HDAC3-204ENST00000469207 BRPF3Q9ULD4 1205 aa14.05□□□□□ -0.16
HDAC3-204ENST00000469207 ADGRA3Q8IWK6 1321 aa14.05□□□□□ -0.16
HDAC3-204ENST00000469207 C5orf67F2Z3F1 127 aa14.04□□□□□ -0.16
HDAC3-204ENST00000469207 ADAMTS3O15072 1205 aa14.04□□□□□ -0.16
HDAC3-204ENST00000469207 DGKIO75912 1065 aa14.04□□□□□ -0.16
HDAC3-204ENST00000469207 CALM1P0DP23 149 aa14.04□□□□□ -0.16
HDAC3-204ENST00000469207 CALM2P0DP24 149 aa14.04□□□□□ -0.16
HDAC3-204ENST00000469207 CALM3P0DP25 149 aa14.04□□□□□ -0.16
HDAC3-204ENST00000469207 DNAJB1P25685 340 aa14.04□□□□□ -0.16
HDAC3-204ENST00000469207 MRPS6P82932 125 aaKnown RBP14.04□□□□□ -0.16
HDAC3-204ENST00000469207 ITGB3BPQ13352 177 aaPredicted RBP14.04□□□□□ -0.16
HDAC3-204ENST00000469207 COL19A1Q14993 1142 aa14.04□□□□□ -0.16
HDAC3-204ENST00000469207 TMEM266Q2M3C6 531 aa14.04□□□□□ -0.16
HDAC3-204ENST00000469207 PAN2Q504Q3 1202 aaKnown RBP14.04□□□□□ -0.16
HDAC3-204ENST00000469207 TSHZ1Q6ZSZ6 1077 aa14.04□□□□□ -0.16
HDAC3-204ENST00000469207 RSPH3Q86UC2 560 aa14.04□□□□□ -0.16
HDAC3-204ENST00000469207 CRIPAKQ8N1N5 446 aa14.04□□□□□ -0.16
HDAC3-204ENST00000469207 CLP1Q92989 425 aaKnown RBP14.04□□□□□ -0.16
HDAC3-204ENST00000469207 CDHR5Q9HBB8 845 aa14.04□□□□□ -0.16
HDAC3-204ENST00000469207 JPH1Q9HDC5 661 aaPredicted RBP14.04□□□□□ -0.16
HDAC3-204ENST00000469207 ANO2Q9NQ90 1003 aa14.04□□□□□ -0.16
HDAC3-204ENST00000469207 PADI3Q9ULW8 664 aa14.04□□□□□ -0.16
HDAC3-204ENST00000469207 TRPC6Q9Y210 931 aa14.04□□□□□ -0.16
HDAC3-204ENST00000469207 HCN4Q9Y3Q4 1203 aa14.04□□□□□ -0.16
HDAC3-204ENST00000469207 MRPL42Q9Y6G3 142 aaKnown RBP14.04□□□□□ -0.16
HDAC3-204ENST00000469207 V9GY48 417 aaPredicted RBP14.04□□□□□ -0.16
HDAC3-204ENST00000469207 DDX39AO00148 427 aaKnown RBP14.03□□□□□ -0.16
HDAC3-204ENST00000469207 MAFGO15525 162 aa14.03□□□□□ -0.16
HDAC3-204ENST00000469207 RB1P06400 928 aa14.03□□□□□ -0.16
HDAC3-204ENST00000469207 HOXD11P31277 338 aaPredicted RBP14.03□□□□□ -0.16
HDAC3-204ENST00000469207 ACTR2P61160 394 aa14.03□□□□□ -0.16
HDAC3-204ENST00000469207 FUT2Q10981 343 aa14.03□□□□□ -0.16
HDAC3-204ENST00000469207 CTC1Q2NKJ3 1217 aa14.03□□□□□ -0.16
HDAC3-204ENST00000469207 TMX1Q9H3N1 280 aa14.03□□□□□ -0.16
HDAC3-204ENST00000469207 PLAGL2Q9UPG8 496 aa14.03□□□□□ -0.16
HDAC3-204ENST00000469207 PCDHGC5Q9Y5F6 944 aa14.03□□□□□ -0.16
HDAC3-204ENST00000469207 ATG2AQ2TAZ0 1938 aa14.03□□□□□ -0.16
HDAC3-204ENST00000469207 TTC3P53804 2025 aa14.02□□□□□ -0.16
HDAC3-204ENST00000469207 COL4A6Q14031 1691 aa14.02□□□□□ -0.16
HDAC3-204ENST00000469207 CNTNAP5Q8WYK1 1306 aa14.02□□□□□ -0.17
HDAC3-204ENST00000469207 RRN3P2A6NIE6 340 aa14.02□□□□□ -0.17
HDAC3-204ENST00000469207 PPFIA3O75145 1194 aa14.02□□□□□ -0.17
HDAC3-204ENST00000469207 CCNE2O96020 404 aa14.02□□□□□ -0.17
HDAC3-204ENST00000469207 ITGB1P05556 798 aa14.02□□□□□ -0.17
HDAC3-204ENST00000469207 IRS1P35568 1242 aa14.02□□□□□ -0.17
HDAC3-204ENST00000469207 STAT5BP51692 787 aa14.02□□□□□ -0.17
HDAC3-204ENST00000469207 NAPAP54920 295 aa14.02□□□□□ -0.17
HDAC3-204ENST00000469207 EXOSC10Q01780 885 aaKnown RBP14.02□□□□□ -0.17
HDAC3-204ENST00000469207 ZP2Q05996 745 aa14.02□□□□□ -0.17
HDAC3-204ENST00000469207 PUS10Q3MIT2 529 aaKnown RBP14.02□□□□□ -0.17
HDAC3-204ENST00000469207 ADCK5Q3MIX3 580 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms