RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 CABP7Q86V35 215 aa9.11□□□□□ -0.95
HDAC6-216ENST00000468949 CKAP2LQ8IYA6 745 aa9.11□□□□□ -0.95
HDAC6-216ENST00000468949 C4orf32Q8N8J7 132 aa9.11□□□□□ -0.95
HDAC6-216ENST00000468949 FSIP1Q8NA03 581 aa9.11□□□□□ -0.95
HDAC6-216ENST00000468949 PPTC7Q8NI37 304 aa9.11□□□□□ -0.95
HDAC6-216ENST00000468949 SYMPKQ92797 1274 aaKnown RBP9.11□□□□□ -0.95
HDAC6-216ENST00000468949 GLG1Q92896 1179 aa9.11□□□□□ -0.95
HDAC6-216ENST00000468949 CLIC6Q96NY7 704 aa9.11□□□□□ -0.95
HDAC6-216ENST00000468949 KATNBL1Q9H079 304 aa9.11□□□□□ -0.95
HDAC6-216ENST00000468949 CRISPLD2Q9H0B8 497 aa9.11□□□□□ -0.95
HDAC6-216ENST00000468949 NT5C3AQ9H0P0 336 aa9.11□□□□□ -0.95
HDAC6-216ENST00000468949 DISC1Q9NRI5 854 aa9.11□□□□□ -0.95
HDAC6-216ENST00000468949 VAV3Q9UKW4 847 aa9.11□□□□□ -0.95
HDAC6-216ENST00000468949 ZNF215Q9UL58 517 aaPredicted RBP9.11□□□□□ -0.95
HDAC6-216ENST00000468949 PCDHA10Q9Y5I2 948 aa9.11□□□□□ -0.95
HDAC6-216ENST00000468949 PDE4DIPQ5VU43 2346 aa9.11□□□□□ -0.95
HDAC6-216ENST00000468949 ZNFX1Q9P2E3 1918 aaKnown RBP9.11□□□□□ -0.95
HDAC6-216ENST00000468949 A0A1W2PQ27 194 aa9.1□□□□□ -0.95
HDAC6-216ENST00000468949 A0A1W2PQ64 194 aa9.1□□□□□ -0.95
HDAC6-216ENST00000468949 A0A1W2PQD8 194 aa9.1□□□□□ -0.95
HDAC6-216ENST00000468949 DYNC1LI2O43237 492 aaPredicted RBP9.1□□□□□ -0.95
HDAC6-216ENST00000468949 SLC26A4O43511 780 aa9.1□□□□□ -0.95
HDAC6-216ENST00000468949 DUSP11O75319 330 aaKnown RBP9.1□□□□□ -0.95
HDAC6-216ENST00000468949 MBD3O95983 291 aa9.1□□□□□ -0.95
HDAC6-216ENST00000468949 C6orf222P0C671 652 aaPredicted RBP9.1□□□□□ -0.95
HDAC6-216ENST00000468949 SUPT20HL2P0C7V6 817 aa9.1□□□□□ -0.95
HDAC6-216ENST00000468949 CCND3P30281 292 aaPredicted RBP9.1□□□□□ -0.95
HDAC6-216ENST00000468949 MCM4P33991 863 aa9.1□□□□□ -0.95
HDAC6-216ENST00000468949 STAT6P42226 847 aa9.1□□□□□ -0.95
HDAC6-216ENST00000468949 CYP4A11Q02928 519 aa9.1□□□□□ -0.95
HDAC6-216ENST00000468949 EPHA7Q15375 998 aa9.1□□□□□ -0.95
HDAC6-216ENST00000468949 DGKDQ16760 1214 aa9.1□□□□□ -0.95
HDAC6-216ENST00000468949 SPECC1Q5M775 1068 aa9.1□□□□□ -0.95
HDAC6-216ENST00000468949 GJC2Q5T442 439 aaPredicted RBP9.1□□□□□ -0.95
HDAC6-216ENST00000468949 UTP14CQ5TAP6 766 aaKnown RBP9.1□□□□□ -0.95
HDAC6-216ENST00000468949 CCDC62Q6P9F0 684 aa9.1□□□□□ -0.95
HDAC6-216ENST00000468949 UBE2Q1Q7Z7E8 422 aa9.1□□□□□ -0.95
HDAC6-216ENST00000468949 CEP57L1Q8IYX8 460 aa9.1□□□□□ -0.95
HDAC6-216ENST00000468949 IGSF22Q8N9C0 903 aa9.1□□□□□ -0.95
HDAC6-216ENST00000468949 ANKLE1Q8NAG6 615 aa9.1□□□□□ -0.95
HDAC6-216ENST00000468949 SEPT1Q8WYJ6 367 aa9.1□□□□□ -0.95
HDAC6-216ENST00000468949 COPS5Q92905 334 aa9.1□□□□□ -0.95
HDAC6-216ENST00000468949 EMID1Q96A84 441 aaPredicted RBP9.1□□□□□ -0.95
HDAC6-216ENST00000468949 EIF2AK1Q9BQI3 630 aaKnown RBP9.1□□□□□ -0.95
HDAC6-216ENST00000468949 HTATIP2Q9BUP3 242 aa9.1□□□□□ -0.95
HDAC6-216ENST00000468949 XPNPEP3Q9NQH7 507 aa9.1□□□□□ -0.95
HDAC6-216ENST00000468949 DDX20Q9UHI6 824 aaKnown RBP9.1□□□□□ -0.95
HDAC6-216ENST00000468949 Q9Y3F1 56 aa9.1□□□□□ -0.95
HDAC6-216ENST00000468949 PP2D1A8MPX8 630 aa9.09□□□□□ -0.95
HDAC6-216ENST00000468949 KINO60870 393 aaKnown RBP9.09□□□□□ -0.95
HDAC6-216ENST00000468949 TFRCP02786 760 aaKnown RBP9.09□□□□□ -0.95
HDAC6-216ENST00000468949 P4HBP07237 508 aaKnown RBP9.09□□□□□ -0.95
HDAC6-216ENST00000468949 MYL3P08590 195 aa9.09□□□□□ -0.95
HDAC6-216ENST00000468949 PFKFB1P16118 471 aa9.09□□□□□ -0.95
HDAC6-216ENST00000468949 CMA1P23946 247 aa9.09□□□□□ -0.95
HDAC6-216ENST00000468949 TCF7P36402 384 aaPredicted RBP9.09□□□□□ -0.95
HDAC6-216ENST00000468949 SYKP43405 635 aa9.09□□□□□ -0.95
HDAC6-216ENST00000468949 CHMP4BP1P59074 171 aa9.09□□□□□ -0.95
HDAC6-216ENST00000468949 PSMC5P62195 406 aa9.09□□□□□ -0.95
HDAC6-216ENST00000468949 SP2Q02086 613 aa9.09□□□□□ -0.95
HDAC6-216ENST00000468949 GRIN1Q05586 938 aa9.09□□□□□ -0.95
HDAC6-216ENST00000468949 ARHGAP1Q07960 439 aa9.09□□□□□ -0.95
HDAC6-216ENST00000468949 FSCN1Q16658 493 aaKnown RBP9.09□□□□□ -0.95
HDAC6-216ENST00000468949 RRAGBQ5VZM2 374 aa9.09□□□□□ -0.95
HDAC6-216ENST00000468949 RESP18Q5W5W9 173 aa9.09□□□□□ -0.95
HDAC6-216ENST00000468949 PDXDC2PQ6P474 469 aa9.09□□□□□ -0.95
HDAC6-216ENST00000468949 RNF180Q86T96 592 aa9.09□□□□□ -0.95
HDAC6-216ENST00000468949 TPH2Q8IWU9 490 aa9.09□□□□□ -0.95
HDAC6-216ENST00000468949 PDILTQ8N807 584 aa9.09□□□□□ -0.95
HDAC6-216ENST00000468949 BANK1Q8NDB2 785 aa9.09□□□□□ -0.95
HDAC6-216ENST00000468949 TRPV1Q8NER1 839 aa9.09□□□□□ -0.95
HDAC6-216ENST00000468949 FBXO22Q8NEZ5 403 aa9.09□□□□□ -0.95
HDAC6-216ENST00000468949 AFG1LQ8WV93 481 aa9.09□□□□□ -0.95
HDAC6-216ENST00000468949 LENG1Q96BZ8 264 aaPredicted RBP9.09□□□□□ -0.95
HDAC6-216ENST00000468949 DYDC2Q96IM9 177 aa9.09□□□□□ -0.95
HDAC6-216ENST00000468949 FAM167AQ96KS9 214 aa9.09□□□□□ -0.95
HDAC6-216ENST00000468949 LXNQ9BS40 222 aa9.09□□□□□ -0.95
HDAC6-216ENST00000468949 KATNAL1Q9BW62 490 aa9.09□□□□□ -0.95
HDAC6-216ENST00000468949 ZSWIM4Q9H7M6 989 aa9.09□□□□□ -0.95
HDAC6-216ENST00000468949 TUFT1Q9NNX1 390 aa9.09□□□□□ -0.95
HDAC6-216ENST00000468949 ZNF302Q9NR11 478 aa9.09□□□□□ -0.95
HDAC6-216ENST00000468949 GABBR1Q9UBS5 961 aa9.09□□□□□ -0.95
HDAC6-216ENST00000468949 HOOK1Q9UJC3 728 aaKnown RBP9.09□□□□□ -0.95
HDAC6-216ENST00000468949 SYNRGQ9UMZ2 1314 aa9.08□□□□□ -0.96
HDAC6-216ENST00000468949 BRCA2P51587 3418 aa9.08□□□□□ -0.96
HDAC6-216ENST00000468949 MCM3APO60318 1980 aa9.08□□□□□ -0.96
HDAC6-216ENST00000468949 KIAA1217Q5T5P2 1943 aa9.08□□□□□ -0.96
HDAC6-216ENST00000468949 A0A1B0GVL5 298 aa9.08□□□□□ -0.96
HDAC6-216ENST00000468949 POTEB3A0JP26 581 aa9.08□□□□□ -0.96
HDAC6-216ENST00000468949 KBTBD13C9JR72 458 aa9.08□□□□□ -0.96
HDAC6-216ENST00000468949 EML1O00423 815 aa9.08□□□□□ -0.96
HDAC6-216ENST00000468949 DHX15O43143 795 aaKnown RBP9.08□□□□□ -0.96
HDAC6-216ENST00000468949 KPNA6O60684 536 aa9.08□□□□□ -0.96
HDAC6-216ENST00000468949 PPP1R37O75864 691 aa9.08□□□□□ -0.96
HDAC6-216ENST00000468949 CCNE2O96020 404 aa9.08□□□□□ -0.96
HDAC6-216ENST00000468949 IGHA2P01877 340 aa9.08□□□□□ -0.96
HDAC6-216ENST00000468949 SSBP05455 408 aaKnown RBP eCLIP9.08□□□□□ -0.96
HDAC6-216ENST00000468949 MMP3P08254 477 aa9.08□□□□□ -0.96
HDAC6-216ENST00000468949 MUTP22033 750 aa9.08□□□□□ -0.96
HDAC6-216ENST00000468949 MARK3P27448 753 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms