RNA–Protein interactions for RNA: ENST00000467141.1

MSL3-209, Transcript of MSL complex subunit 3, humanhuman

TSL 3

Gene MSL3, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-209ENST00000467141 CYFIP1Q7L576 1253 aa4.73□□□□□ -1.65
MSL3-209ENST00000467141 ATG9AQ7Z3C6 839 aa4.73□□□□□ -1.65
MSL3-209ENST00000467141 PDZD3Q86UT5 571 aa4.73□□□□□ -1.65
MSL3-209ENST00000467141 STK35Q8TDR2 534 aa4.73□□□□□ -1.65
MSL3-209ENST00000467141 ABHD8Q96I13 439 aa4.73□□□□□ -1.65
MSL3-209ENST00000467141 PRMT6Q96LA8 375 aaPredicted RBP4.73□□□□□ -1.65
MSL3-209ENST00000467141 ASB16Q96NS5 453 aa4.73□□□□□ -1.65
MSL3-209ENST00000467141 NECAB3Q96P71 396 aaPredicted RBP4.73□□□□□ -1.65
MSL3-209ENST00000467141 MRIQ9BWK5 157 aa4.73□□□□□ -1.65
MSL3-209ENST00000467141 CEP44Q9C0F1 390 aa4.73□□□□□ -1.65
MSL3-209ENST00000467141 SLITRK6Q9H5Y7 841 aa4.73□□□□□ -1.65
MSL3-209ENST00000467141 PICK1Q9NRD5 415 aa4.73□□□□□ -1.65
MSL3-209ENST00000467141 HDAC9Q9UKV0 1011 aa4.73□□□□□ -1.65
MSL3-209ENST00000467141 PCOLCE2Q9UKZ9 415 aa4.73□□□□□ -1.65
MSL3-209ENST00000467141 NOB1Q9ULX3 412 aaKnown RBP4.73□□□□□ -1.65
MSL3-209ENST00000467141 TNNQ9UQP3 1299 aa4.73□□□□□ -1.65
MSL3-209ENST00000467141 FRMPD3Q5JV73 1810 aa4.73□□□□□ -1.65
MSL3-209ENST00000467141 KIF16BQ96L93 1317 aa4.72□□□□□ -1.65
MSL3-209ENST00000467141 PLXNB2O15031 1838 aa4.72□□□□□ -1.65
MSL3-209ENST00000467141 EYA2O00167 538 aa4.72□□□□□ -1.65
MSL3-209ENST00000467141 GIPC1O14908 333 aa4.72□□□□□ -1.65
MSL3-209ENST00000467141 UBTFL1P0CB47 393 aaPredicted RBP4.72□□□□□ -1.65
MSL3-209ENST00000467141 RARSP54136 660 aaKnown RBP4.72□□□□□ -1.65
MSL3-209ENST00000467141 PRKG1Q13976 671 aa4.72□□□□□ -1.65
MSL3-209ENST00000467141 METTL24Q5JXM2 366 aa4.72□□□□□ -1.65
MSL3-209ENST00000467141 MFSD14BQ5SR56 506 aa4.72□□□□□ -1.65
MSL3-209ENST00000467141 LDLRAD1Q5T700 205 aa4.72□□□□□ -1.65
MSL3-209ENST00000467141 FBXO33Q7Z6M2 555 aa4.72□□□□□ -1.65
MSL3-209ENST00000467141 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.72□□□□□ -1.65
MSL3-209ENST00000467141 ZDHHC14Q8IZN3 488 aa4.72□□□□□ -1.65
MSL3-209ENST00000467141 C3orf58Q8NDZ4 430 aa4.72□□□□□ -1.65
MSL3-209ENST00000467141 GPBAR1Q8TDU6 330 aa4.72□□□□□ -1.65
MSL3-209ENST00000467141 MEIS3Q99687 375 aa4.72□□□□□ -1.65
MSL3-209ENST00000467141 DEFB129Q9H1M3 183 aa4.72□□□□□ -1.65
MSL3-209ENST00000467141 RNF186Q9NXI6 227 aa4.72□□□□□ -1.65
MSL3-209ENST00000467141 SAGE1Q9NXZ1 904 aa4.72□□□□□ -1.65
MSL3-209ENST00000467141 TTF2Q9UNY4 1162 aaKnown RBP4.72□□□□□ -1.65
MSL3-209ENST00000467141 PCDHGC5Q9Y5F6 944 aa4.72□□□□□ -1.65
MSL3-209ENST00000467141 LRRFIP2Q9Y608 721 aaKnown RBP4.72□□□□□ -1.65
MSL3-209ENST00000467141 PATL2C9JE40 543 aaKnown RBP4.71□□□□□ -1.66
MSL3-209ENST00000467141 FBXO24O75426 580 aa4.71□□□□□ -1.66
MSL3-209ENST00000467141 BCAR3O75815 825 aa4.71□□□□□ -1.66
MSL3-209ENST00000467141 TRIM27P14373 513 aa4.71□□□□□ -1.66
MSL3-209ENST00000467141 TNFRSF1AP19438 455 aa4.71□□□□□ -1.66
MSL3-209ENST00000467141 NF2P35240 595 aa4.71□□□□□ -1.66
MSL3-209ENST00000467141 CRKP46108 304 aa4.71□□□□□ -1.66
MSL3-209ENST00000467141 CHAF1AQ13111 956 aaPredicted RBP4.71□□□□□ -1.66
MSL3-209ENST00000467141 RASA3Q14644 834 aa4.71□□□□□ -1.66
MSL3-209ENST00000467141 PUM3Q15397 648 aaKnown RBP4.71□□□□□ -1.66
MSL3-209ENST00000467141 MAP3K11Q16584 847 aa4.71□□□□□ -1.66
MSL3-209ENST00000467141 NBPF12Q5TAG4 269 aaPredicted RBP4.71□□□□□ -1.66
MSL3-209ENST00000467141 INTS3Q68E01 1043 aaKnown RBP4.71□□□□□ -1.66
MSL3-209ENST00000467141 CLMNQ96JQ2 1002 aa4.71□□□□□ -1.66
MSL3-209ENST00000467141 TEPSINQ96N21 525 aa4.71□□□□□ -1.66
MSL3-209ENST00000467141 OSBPL7Q9BZF2 842 aa4.71□□□□□ -1.66
MSL3-209ENST00000467141 API5Q9BZZ5 524 aaKnown RBP4.71□□□□□ -1.66
MSL3-209ENST00000467141 MCOLN1Q9GZU1 580 aa4.71□□□□□ -1.66
MSL3-209ENST00000467141 SIL1Q9H173 461 aa4.71□□□□□ -1.66
MSL3-209ENST00000467141 TDRD3Q9H7E2 651 aaKnown RBP4.71□□□□□ -1.66
MSL3-209ENST00000467141 VEZTQ9HBM0 779 aa4.71□□□□□ -1.66
MSL3-209ENST00000467141 ZNF70Q9UC06 446 aaPredicted RBP4.71□□□□□ -1.66
MSL3-209ENST00000467141 PPM1HQ9ULR3 514 aa4.71□□□□□ -1.66
MSL3-209ENST00000467141 PA2G4Q9UQ80 394 aaKnown RBP4.71□□□□□ -1.66
MSL3-209ENST00000467141 PPP2R3BQ9Y5P8 575 aa4.71□□□□□ -1.66
MSL3-209ENST00000467141 CSADQ9Y600 493 aa4.71□□□□□ -1.66
MSL3-209ENST00000467141 ALPK3Q96L96 1907 aa4.71□□□□□ -1.66
MSL3-209ENST00000467141 COL11A1P12107 1806 aaPredicted RBP4.71□□□□□ -1.66
MSL3-209ENST00000467141 PDE4DIPQ5VU43 2346 aa4.71□□□□□ -1.66
MSL3-209ENST00000467141 MKI67P46013 3256 aaKnown RBP4.7□□□□□ -1.66
MSL3-209ENST00000467141 RFX7Q2KHR2 1363 aa4.7□□□□□ -1.66
MSL3-209ENST00000467141 RPAP1Q9BWH6 1393 aaPredicted RBP4.7□□□□□ -1.66
MSL3-209ENST00000467141 TMEM265A0A087WTH1 108 aa4.7□□□□□ -1.66
MSL3-209ENST00000467141 MYO1BO43795 1136 aa4.7□□□□□ -1.66
MSL3-209ENST00000467141 USP2O75604 605 aaPredicted RBP4.7□□□□□ -1.66
MSL3-209ENST00000467141 CIAO1O76071 339 aa4.7□□□□□ -1.66
MSL3-209ENST00000467141 IFIT1P09914 478 aaKnown RBP4.7□□□□□ -1.66
MSL3-209ENST00000467141 BMP6P22004 513 aa4.7□□□□□ -1.66
MSL3-209ENST00000467141 TM4SF4P48230 202 aa4.7□□□□□ -1.66
MSL3-209ENST00000467141 RBM5P52756 815 aaKnown RBP eCLIP4.7□□□□□ -1.66
MSL3-209ENST00000467141 CACNB3P54284 484 aa4.7□□□□□ -1.66
MSL3-209ENST00000467141 ERVK-24P63145 666 aa4.7□□□□□ -1.66
MSL3-209ENST00000467141 HDLBPQ00341 1268 aaKnown RBP4.7□□□□□ -1.66
MSL3-209ENST00000467141 ZNF252P-AS1Q0IIN9 211 aa4.7□□□□□ -1.66
MSL3-209ENST00000467141 IKZF1Q13422 519 aa4.7□□□□□ -1.66
MSL3-209ENST00000467141 MTX1Q13505 466 aa4.7□□□□□ -1.66
MSL3-209ENST00000467141 LRRC14Q15048 493 aa4.7□□□□□ -1.66
MSL3-209ENST00000467141 ATP2B3Q16720 1220 aa4.7□□□□□ -1.66
MSL3-209ENST00000467141 CAVIN4Q5BKX8 364 aa4.7□□□□□ -1.66
MSL3-209ENST00000467141 ZC3H12AQ5D1E8 599 aaKnown RBP4.7□□□□□ -1.66
MSL3-209ENST00000467141 LLGL2Q6P1M3 1020 aa4.7□□□□□ -1.66
MSL3-209ENST00000467141 ARMC9Q7Z3E5 817 aa4.7□□□□□ -1.66
MSL3-209ENST00000467141 VPS37DQ86XT2 251 aa4.7□□□□□ -1.66
MSL3-209ENST00000467141 RNF214Q8ND24 703 aa4.7□□□□□ -1.66
MSL3-209ENST00000467141 BAHD1Q8TBE0 780 aaPredicted RBP4.7□□□□□ -1.66
MSL3-209ENST00000467141 GRIN3AQ8TCU5 1115 aa4.7□□□□□ -1.66
MSL3-209ENST00000467141 TBC1D22AQ8WUA7 517 aa4.7□□□□□ -1.66
MSL3-209ENST00000467141 LPIN2Q92539 896 aa4.7□□□□□ -1.66
MSL3-209ENST00000467141 ARHGAP45Q92619 1136 aa4.7□□□□□ -1.66
MSL3-209ENST00000467141 ISL2Q96A47 359 aa4.7□□□□□ -1.66
MSL3-209ENST00000467141 NAF1Q96HR8 494 aaKnown RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms