RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 ADSSL1Q8N142 457 aa6.6□□□□□ -1.35
CXXC4-202ENST00000466963 LRRC43Q8N309 656 aa6.6□□□□□ -1.35
CXXC4-202ENST00000466963 SLC2A4RGQ9NR83 387 aa6.6□□□□□ -1.35
CXXC4-202ENST00000466963 CHST12Q9NRB3 414 aa6.6□□□□□ -1.35
CXXC4-202ENST00000466963 RGS18Q9NS28 235 aa6.6□□□□□ -1.35
CXXC4-202ENST00000466963 PCDHB7Q9Y5E2 793 aa6.6□□□□□ -1.35
CXXC4-202ENST00000466963 TTC3P53804 2025 aa6.6□□□□□ -1.35
CXXC4-202ENST00000466963 NFIBO00712 420 aa6.59□□□□□ -1.35
CXXC4-202ENST00000466963 NCAM2O15394 837 aa6.59□□□□□ -1.35
CXXC4-202ENST00000466963 APPP05067 770 aa6.59□□□□□ -1.35
CXXC4-202ENST00000466963 MBTPS1Q14703 1052 aa6.59□□□□□ -1.35
CXXC4-202ENST00000466963 ZBTB33Q86T24 672 aa6.59□□□□□ -1.35
CXXC4-202ENST00000466963 TMEM47Q9BQJ4 181 aa6.59□□□□□ -1.35
CXXC4-202ENST00000466963 CERS4Q9HA82 394 aa6.59□□□□□ -1.35
CXXC4-202ENST00000466963 EPB41L4AQ9HCS5 686 aaPredicted RBP6.59□□□□□ -1.35
CXXC4-202ENST00000466963 EPS15L1Q9UBC2 864 aa6.59□□□□□ -1.35
CXXC4-202ENST00000466963 CEP131Q9UPN4 1083 aa6.59□□□□□ -1.35
CXXC4-202ENST00000466963 IGSF9BQ9UPX0 1349 aa6.59□□□□□ -1.35
CXXC4-202ENST00000466963 PARP1P09874 1014 aaKnown RBP6.59□□□□□ -1.35
CXXC4-202ENST00000466963 RAB27AP51159 221 aa6.59□□□□□ -1.35
CXXC4-202ENST00000466963 TDGQ13569 410 aa6.59□□□□□ -1.35
CXXC4-202ENST00000466963 PPP1R18Q6NYC8 613 aa6.59□□□□□ -1.35
CXXC4-202ENST00000466963 PDXDC1Q6P996 788 aa6.59□□□□□ -1.35
CXXC4-202ENST00000466963 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.59□□□□□ -1.35
CXXC4-202ENST00000466963 MFSD6Q6ZSS7 791 aa6.59□□□□□ -1.35
CXXC4-202ENST00000466963 SLC24A5Q71RS6 500 aa6.59□□□□□ -1.35
CXXC4-202ENST00000466963 SEPT1Q8WYJ6 367 aa6.59□□□□□ -1.35
CXXC4-202ENST00000466963 FAM167AQ96KS9 214 aa6.59□□□□□ -1.35
CXXC4-202ENST00000466963 ZNF558Q96NG5 402 aa6.59□□□□□ -1.35
CXXC4-202ENST00000466963 BOLA2Q9H3K6 86 aa6.59□□□□□ -1.35
CXXC4-202ENST00000466963 MFSD1Q9H3U5 465 aa6.59□□□□□ -1.35
CXXC4-202ENST00000466963 DCTPP1Q9H773 170 aa6.59□□□□□ -1.35
CXXC4-202ENST00000466963 MYH7BA7E2Y1 1941 aa6.59□□□□□ -1.35
CXXC4-202ENST00000466963 NCOR1O75376 2440 aa6.59□□□□□ -1.35
CXXC4-202ENST00000466963 TTC28Q96AY4 2481 aa6.59□□□□□ -1.35
CXXC4-202ENST00000466963 H3BQ06 376 aaPredicted RBP6.59□□□□□ -1.36
CXXC4-202ENST00000466963 ZBTB5O15062 677 aa6.59□□□□□ -1.36
CXXC4-202ENST00000466963 GRM6O15303 877 aa6.59□□□□□ -1.36
CXXC4-202ENST00000466963 MAGEB2O15479 319 aa6.59□□□□□ -1.36
CXXC4-202ENST00000466963 PFKPQ01813 784 aa6.59□□□□□ -1.36
CXXC4-202ENST00000466963 CDC37Q16543 378 aaPredicted RBP6.59□□□□□ -1.36
CXXC4-202ENST00000466963 NETO1Q8TDF5 533 aa6.59□□□□□ -1.36
CXXC4-202ENST00000466963 OSBP2Q969R2 916 aa6.59□□□□□ -1.36
CXXC4-202ENST00000466963 TMEM175Q9BSA9 504 aa6.59□□□□□ -1.36
CXXC4-202ENST00000466963 KAT14Q9H8E8 782 aa6.59□□□□□ -1.36
CXXC4-202ENST00000466963 SPG21Q9NZD8 308 aa6.59□□□□□ -1.36
CXXC4-202ENST00000466963 ZBTB47Q9UFB7 747 aaPredicted RBP6.59□□□□□ -1.36
CXXC4-202ENST00000466963 GGPS1O95749 300 aa6.58□□□□□ -1.36
CXXC4-202ENST00000466963 FOSP01100 380 aaPredicted RBP6.58□□□□□ -1.36
CXXC4-202ENST00000466963 ITGB1P05556 798 aa6.58□□□□□ -1.36
CXXC4-202ENST00000466963 SHC2P98077 582 aa6.58□□□□□ -1.36
CXXC4-202ENST00000466963 PAK2Q13177 524 aa6.58□□□□□ -1.36
CXXC4-202ENST00000466963 KREMEN2Q8NCW0 462 aa6.58□□□□□ -1.36
CXXC4-202ENST00000466963 CNNM3Q8NE01 707 aa6.58□□□□□ -1.36
CXXC4-202ENST00000466963 POF1BQ8WVV4 589 aa6.58□□□□□ -1.36
CXXC4-202ENST00000466963 ATP6V0A4Q9HBG4 840 aa6.58□□□□□ -1.36
CXXC4-202ENST00000466963 UBN1Q9NPG3 1134 aa6.58□□□□□ -1.36
CXXC4-202ENST00000466963 IL17RBQ9NRM6 502 aa6.58□□□□□ -1.36
CXXC4-202ENST00000466963 MAFFQ9ULX9 164 aa6.58□□□□□ -1.36
CXXC4-202ENST00000466963 FANCMQ8IYD8 2048 aa6.58□□□□□ -1.36
CXXC4-202ENST00000466963 LPIN1Q14693 890 aa6.58□□□□□ -1.36
CXXC4-202ENST00000466963 PGM5Q15124 567 aa6.58□□□□□ -1.36
CXXC4-202ENST00000466963 FAM160B1Q5W0V3 765 aa6.58□□□□□ -1.36
CXXC4-202ENST00000466963 COLGALT1Q8NBJ5 622 aa6.58□□□□□ -1.36
CXXC4-202ENST00000466963 ALG1Q9BT22 464 aa6.58□□□□□ -1.36
CXXC4-202ENST00000466963 EMILIN2Q9BXX0 1053 aa6.58□□□□□ -1.36
CXXC4-202ENST00000466963 EXOC6BQ9Y2D4 811 aa6.58□□□□□ -1.36
CXXC4-202ENST00000466963 MRPS17Q9Y2R5 130 aaKnown RBP6.58□□□□□ -1.36
CXXC4-202ENST00000466963 SALL2Q9Y467 1007 aaPredicted RBP6.58□□□□□ -1.36
CXXC4-202ENST00000466963 TRIP12Q14669 1992 aaPredicted RBP6.58□□□□□ -1.36
CXXC4-202ENST00000466963 KINO60870 393 aaKnown RBP6.57□□□□□ -1.36
CXXC4-202ENST00000466963 SEPT14Q6ZU15 432 aa6.57□□□□□ -1.36
CXXC4-202ENST00000466963 KCTD1Q719H9 257 aa6.57□□□□□ -1.36
CXXC4-202ENST00000466963 CLEC10AQ8IUN9 316 aa6.57□□□□□ -1.36
CXXC4-202ENST00000466963 TMTC2Q8N394 836 aa6.57□□□□□ -1.36
CXXC4-202ENST00000466963 NELL1Q92832 810 aa6.57□□□□□ -1.36
CXXC4-202ENST00000466963 FRAT1Q92837 279 aaPredicted RBP6.57□□□□□ -1.36
CXXC4-202ENST00000466963 JPH2Q9BR39 696 aaPredicted RBP6.57□□□□□ -1.36
CXXC4-202ENST00000466963 INO80BQ9C086 356 aaPredicted RBP6.57□□□□□ -1.36
CXXC4-202ENST00000466963 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.57□□□□□ -1.36
CXXC4-202ENST00000466963 DACT1Q9NYF0 836 aa6.57□□□□□ -1.36
CXXC4-202ENST00000466963 KANSL3Q9P2N6 904 aa6.57□□□□□ -1.36
CXXC4-202ENST00000466963 PCDHA1Q9Y5I3 950 aa6.57□□□□□ -1.36
CXXC4-202ENST00000466963 CNTNAP2Q9UHC6 1331 aa6.57□□□□□ -1.36
CXXC4-202ENST00000466963 PRRC2BQ5JSZ5 2229 aaKnown RBP6.57□□□□□ -1.36
CXXC4-202ENST00000466963 HBP1O60381 514 aa6.57□□□□□ -1.36
CXXC4-202ENST00000466963 ARIH2O95376 493 aa6.57□□□□□ -1.36
CXXC4-202ENST00000466963 GLULP15104 373 aa6.57□□□□□ -1.36
CXXC4-202ENST00000466963 UBA1P22314 1058 aaKnown RBP6.57□□□□□ -1.36
CXXC4-202ENST00000466963 RPS9P46781 194 aaKnown RBP6.57□□□□□ -1.36
CXXC4-202ENST00000466963 CRYBB1P53674 252 aaPredicted RBP6.57□□□□□ -1.36
CXXC4-202ENST00000466963 PPFIA1Q13136 1202 aa6.57□□□□□ -1.36
CXXC4-202ENST00000466963 MCMDC2Q4G0Z9 681 aa6.57□□□□□ -1.36
CXXC4-202ENST00000466963 MTSS1LQ765P7 747 aa6.57□□□□□ -1.36
CXXC4-202ENST00000466963 LOXL4Q96JB6 756 aa6.57□□□□□ -1.36
CXXC4-202ENST00000466963 CELF4Q9BZC1 486 aaKnown RBP6.57□□□□□ -1.36
CXXC4-202ENST00000466963 ISY1Q9ULR0 285 aaKnown RBP6.57□□□□□ -1.36
CXXC4-202ENST00000466963 CYP2D7A0A087X1C5 515 aa6.56□□□□□ -1.36
CXXC4-202ENST00000466963 PNMA6FA0A0J9YX94 578 aa6.56□□□□□ -1.36
CXXC4-202ENST00000466963 RANBP6O60518 1105 aaKnown RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms