RNA–Protein interactions for RNA: ENST00000466618.1

SNED1-208, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 2,198 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-208ENST00000466618 PCNTO95613 3336 aa17.04■□□□□ 0.32
SNED1-208ENST00000466618 EIF3HO15372 352 aaKnown RBP eCLIP17.04■□□□□ 0.32
SNED1-208ENST00000466618 TLR2O60603 784 aa17.04■□□□□ 0.32
SNED1-208ENST00000466618 GYPCP04921 128 aa17.04■□□□□ 0.32
SNED1-208ENST00000466618 CASP14P31944 242 aa17.04■□□□□ 0.32
SNED1-208ENST00000466618 USH1GQ495M9 461 aa17.04■□□□□ 0.32
SNED1-208ENST00000466618 SNRNP48Q6IEG0 339 aaKnown RBP17.04■□□□□ 0.32
SNED1-208ENST00000466618 RIOX2Q8IUF8 465 aa17.04■□□□□ 0.32
SNED1-208ENST00000466618 BCAS4Q8TDM0 211 aa17.04■□□□□ 0.32
SNED1-208ENST00000466618 GDAP1L1Q96MZ0 367 aa17.04■□□□□ 0.32
SNED1-208ENST00000466618 CFHR5Q9BXR6 569 aa17.04■□□□□ 0.32
SNED1-208ENST00000466618 ZMYND12Q9H0C1 365 aa17.04■□□□□ 0.32
SNED1-208ENST00000466618 A1CFQ9NQ94 594 aaKnown RBP17.04■□□□□ 0.32
SNED1-208ENST00000466618 CTDP1Q9Y5B0 961 aaPredicted RBP17.04■□□□□ 0.32
SNED1-208ENST00000466618 ABCB11O95342 1321 aa17.03■□□□□ 0.32
SNED1-208ENST00000466618 ESYT2A0FGR8 921 aa17.03■□□□□ 0.32
SNED1-208ENST00000466618 GOLGA6CA6NDK9 693 aa17.03■□□□□ 0.32
SNED1-208ENST00000466618 GOLGA6DP0CG33 693 aa17.03■□□□□ 0.32
SNED1-208ENST00000466618 MYBL2P10244 700 aa17.03■□□□□ 0.32
SNED1-208ENST00000466618 BCRP11274 1271 aa17.03■□□□□ 0.32
SNED1-208ENST00000466618 FNTAP49354 379 aa17.03■□□□□ 0.32
SNED1-208ENST00000466618 FXR1P51114 621 aaKnown RBP eCLIP17.03■□□□□ 0.32
SNED1-208ENST00000466618 ERVK-9P63128 1117 aa17.03■□□□□ 0.32
SNED1-208ENST00000466618 PPFIA1Q13136 1202 aa17.03■□□□□ 0.32
SNED1-208ENST00000466618 CRHR2Q13324 411 aa17.03■□□□□ 0.32
SNED1-208ENST00000466618 SPECC1Q5M775 1068 aa17.03■□□□□ 0.32
SNED1-208ENST00000466618 KRT40Q6A162 431 aa17.03■□□□□ 0.32
SNED1-208ENST00000466618 GSPT2Q8IYD1 628 aaKnown RBP17.03■□□□□ 0.32
SNED1-208ENST00000466618 CLEC4DQ8WXI8 215 aa17.03■□□□□ 0.32
SNED1-208ENST00000466618 PAGR1Q9BTK6 254 aa17.03■□□□□ 0.32
SNED1-208ENST00000466618 GOLGA6AQ9NYA3 693 aa17.03■□□□□ 0.32
SNED1-208ENST00000466618 ADD3Q9UEY8 706 aaKnown RBP17.03■□□□□ 0.32
SNED1-208ENST00000466618 NAPAP54920 295 aa17.02■□□□□ 0.32
SNED1-208ENST00000466618 C17orf99Q6UX52 265 aa17.02■□□□□ 0.32
SNED1-208ENST00000466618 ANKRD13CQ8N6S4 541 aa17.02■□□□□ 0.32
SNED1-208ENST00000466618 DNAJC5GQ8N7S2 189 aa17.02■□□□□ 0.32
SNED1-208ENST00000466618 MOV10L1Q9BXT6 1211 aaKnown RBP17.02■□□□□ 0.32
SNED1-208ENST00000466618 RABEP2Q9H5N1 569 aa17.02■□□□□ 0.32
SNED1-208ENST00000466618 ZFYVE28Q9HCC9 887 aa17.02■□□□□ 0.32
SNED1-208ENST00000466618 KCNJ14Q9UNX9 436 aa17.02■□□□□ 0.32
SNED1-208ENST00000466618 TARSL2A2RTX5 802 aaKnown RBP17.02■□□□□ 0.31
SNED1-208ENST00000466618 XBP1P17861 261 aa17.02■□□□□ 0.31
SNED1-208ENST00000466618 MCM3P25205 808 aa17.02■□□□□ 0.31
SNED1-208ENST00000466618 FAM110CQ1W6H9 321 aa17.02■□□□□ 0.31
SNED1-208ENST00000466618 GRAMD1CQ8IYS0 662 aa17.02■□□□□ 0.31
SNED1-208ENST00000466618 GPRC5AQ8NFJ5 357 aa17.02■□□□□ 0.31
SNED1-208ENST00000466618 MMS19Q96T76 1030 aa17.02■□□□□ 0.31
SNED1-208ENST00000466618 SELENOOQ9BVL4 669 aa17.02■□□□□ 0.31
SNED1-208ENST00000466618 CAPS2Q9BXY5 557 aa17.02■□□□□ 0.31
SNED1-208ENST00000466618 ATXN2Q99700 1313 aaKnown RBP17.01■□□□□ 0.31
SNED1-208ENST00000466618 ADAMTS3O15072 1205 aa17.01■□□□□ 0.31
SNED1-208ENST00000466618 MMP1P03956 469 aa17.01■□□□□ 0.31
SNED1-208ENST00000466618 GHRHRQ02643 423 aa17.01■□□□□ 0.31
SNED1-208ENST00000466618 PLS1Q14651 629 aa17.01■□□□□ 0.31
SNED1-208ENST00000466618 TKFCQ3LXA3 575 aa17.01■□□□□ 0.31
SNED1-208ENST00000466618 CNGA4Q8IV77 575 aa17.01■□□□□ 0.31
SNED1-208ENST00000466618 TRIML1Q8N9V2 468 aa17.01■□□□□ 0.31
SNED1-208ENST00000466618 CCDC51Q96ER9 411 aa17.01■□□□□ 0.31
SNED1-208ENST00000466618 SERTAD1Q9UHV2 236 aa17.01■□□□□ 0.31
SNED1-208ENST00000466618 MRPL11Q9Y3B7 192 aaKnown RBP17.01■□□□□ 0.31
SNED1-208ENST00000466618 SMCO2A6NFE2 343 aa17.01■□□□□ 0.31
SNED1-208ENST00000466618 MYO1FO00160 1098 aa17.01■□□□□ 0.31
SNED1-208ENST00000466618 ALAS1P13196 640 aa17.01■□□□□ 0.31
SNED1-208ENST00000466618 ERCC5P28715 1186 aaPredicted RBP17.01■□□□□ 0.31
SNED1-208ENST00000466618 GRIN1Q05586 938 aa17.01■□□□□ 0.31
SNED1-208ENST00000466618 DAGLBQ8NCG7 672 aa17.01■□□□□ 0.31
SNED1-208ENST00000466618 CRACR2AQ9BSW2 395 aa17.01■□□□□ 0.31
SNED1-208ENST00000466618 R3HDMLQ9H3Y0 253 aa17.01■□□□□ 0.31
SNED1-208ENST00000466618 RIC8AQ9NPQ8 531 aa17.01■□□□□ 0.31
SNED1-208ENST00000466618 RNF186Q9NXI6 227 aa17.01■□□□□ 0.31
SNED1-208ENST00000466618 CPA4Q9UI42 421 aa17.01■□□□□ 0.31
SNED1-208ENST00000466618 CAPN7Q9Y6W3 813 aa17.01■□□□□ 0.31
SNED1-208ENST00000466618 CCDC189A1A4V9 331 aa17■□□□□ 0.31
SNED1-208ENST00000466618 M0R2N6 131 aa17■□□□□ 0.31
SNED1-208ENST00000466618 ZMYND10O75800 440 aa17■□□□□ 0.31
SNED1-208ENST00000466618 SLC25A27O95847 323 aa17■□□□□ 0.31
SNED1-208ENST00000466618 GNGT1P63211 74 aa17■□□□□ 0.31
SNED1-208ENST00000466618 GALNT17Q6IS24 598 aa17■□□□□ 0.31
SNED1-208ENST00000466618 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17■□□□□ 0.31
SNED1-208ENST00000466618 TMTC1Q8IUR5 882 aa17■□□□□ 0.31
SNED1-208ENST00000466618 SHCBP1Q8NEM2 672 aa17■□□□□ 0.31
SNED1-208ENST00000466618 CABS1Q96KC9 395 aa17■□□□□ 0.31
SNED1-208ENST00000466618 SH3GL2Q99962 352 aa17■□□□□ 0.31
SNED1-208ENST00000466618 JPH2Q9BR39 696 aaPredicted RBP17■□□□□ 0.31
SNED1-208ENST00000466618 RNF146Q9NTX7 359 aa17■□□□□ 0.31
SNED1-208ENST00000466618 HDAC6Q9UBN7 1215 aa17■□□□□ 0.31
SNED1-208ENST00000466618 SAMM50Q9Y512 469 aa17■□□□□ 0.31
SNED1-208ENST00000466618 NFIBO00712 420 aa16.99■□□□□ 0.31
SNED1-208ENST00000466618 MEIS2O14770 477 aa16.99■□□□□ 0.31
SNED1-208ENST00000466618 NLRP5P59047 1200 aa16.99■□□□□ 0.31
SNED1-208ENST00000466618 TRIM29Q14134 588 aa16.99■□□□□ 0.31
SNED1-208ENST00000466618 KRI1Q8N9T8 703 aaKnown RBP16.99■□□□□ 0.31
SNED1-208ENST00000466618 CHST13Q8NET6 341 aa16.99■□□□□ 0.31
SNED1-208ENST00000466618 MAF1Q9H063 256 aa16.99■□□□□ 0.31
SNED1-208ENST00000466618 PSTPIP2Q9H939 334 aa16.99■□□□□ 0.31
SNED1-208ENST00000466618 TRIM10Q9UDY6 481 aa16.99■□□□□ 0.31
SNED1-208ENST00000466618 PCDHA4Q9UN74 947 aa16.99■□□□□ 0.31
SNED1-208ENST00000466618 ITIH6Q6UXX5 1313 aa16.99■□□□□ 0.31
SNED1-208ENST00000466618 FSBPO95073 299 aa16.99■□□□□ 0.31
SNED1-208ENST00000466618 ERCC3P19447 782 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms