RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 GRB10Q13322 594 aa12.51□□□□□ -0.41
VCP-204ENST00000466100 FSCN1Q16658 493 aaKnown RBP12.51□□□□□ -0.41
VCP-204ENST00000466100 CCSAPQ6IQ19 270 aaPredicted RBP12.51□□□□□ -0.41
VCP-204ENST00000466100 MIS18BP1Q6P0N0 1132 aa12.51□□□□□ -0.41
VCP-204ENST00000466100 POTEBQ6S5H4 581 aa12.51□□□□□ -0.41
VCP-204ENST00000466100 CABP7Q86V35 215 aa12.51□□□□□ -0.41
VCP-204ENST00000466100 CATSPER3Q86XQ3 398 aa12.51□□□□□ -0.41
VCP-204ENST00000466100 FSIP1Q8NA03 581 aa12.51□□□□□ -0.41
VCP-204ENST00000466100 KLHDC9Q8NEP7 349 aa12.51□□□□□ -0.41
VCP-204ENST00000466100 AFAP1L1Q8TED9 768 aa12.51□□□□□ -0.41
VCP-204ENST00000466100 SNX29Q8TEQ0 813 aa12.51□□□□□ -0.41
VCP-204ENST00000466100 MRPS27Q92552 414 aaKnown RBP12.51□□□□□ -0.41
VCP-204ENST00000466100 DYDC2Q96IM9 177 aa12.51□□□□□ -0.41
VCP-204ENST00000466100 LXNQ9BS40 222 aa12.51□□□□□ -0.41
VCP-204ENST00000466100 TUFT1Q9NNX1 390 aa12.51□□□□□ -0.41
VCP-204ENST00000466100 XPNPEP3Q9NQH7 507 aa12.51□□□□□ -0.41
VCP-204ENST00000466100 RGL1Q9NZL6 768 aa12.51□□□□□ -0.41
VCP-204ENST00000466100 STK24Q9Y6E0 443 aa12.51□□□□□ -0.41
VCP-204ENST00000466100 A0A1B0GVL5 298 aa12.5□□□□□ -0.41
VCP-204ENST00000466100 NOP56O00567 594 aaKnown RBP12.5□□□□□ -0.41
VCP-204ENST00000466100 ZNF862O60290 1169 aa12.5□□□□□ -0.41
VCP-204ENST00000466100 PPFIA4O75335 1185 aa12.5□□□□□ -0.41
VCP-204ENST00000466100 STBD1O95210 358 aa12.5□□□□□ -0.41
VCP-204ENST00000466100 LYPLA2O95372 231 aa12.5□□□□□ -0.41
VCP-204ENST00000466100 PGK1P00558 417 aa12.5□□□□□ -0.41
VCP-204ENST00000466100 LGALS2P05162 132 aa12.5□□□□□ -0.41
VCP-204ENST00000466100 P4HBP07237 508 aaKnown RBP12.5□□□□□ -0.41
VCP-204ENST00000466100 PSAPP07602 524 aa12.5□□□□□ -0.41
VCP-204ENST00000466100 ATP4AP20648 1035 aa12.5□□□□□ -0.41
VCP-204ENST00000466100 MUTP22033 750 aa12.5□□□□□ -0.41
VCP-204ENST00000466100 CCT6AP40227 531 aaKnown RBP12.5□□□□□ -0.41
VCP-204ENST00000466100 UBA7P41226 1012 aa12.5□□□□□ -0.41
VCP-204ENST00000466100 CPT1AP50416 773 aa12.5□□□□□ -0.41
VCP-204ENST00000466100 NDUFA8P51970 172 aa12.5□□□□□ -0.41
VCP-204ENST00000466100 BEX3Q00994 111 aa12.5□□□□□ -0.41
VCP-204ENST00000466100 CYP4A11Q02928 519 aa12.5□□□□□ -0.41
VCP-204ENST00000466100 KARSQ15046 597 aaKnown RBP12.5□□□□□ -0.41
VCP-204ENST00000466100 E2F4Q16254 413 aa12.5□□□□□ -0.41
VCP-204ENST00000466100 NAALADL2Q58DX5 795 aa12.5□□□□□ -0.41
VCP-204ENST00000466100 KRT79Q5XKE5 535 aa12.5□□□□□ -0.41
VCP-204ENST00000466100 HAUS3Q68CZ6 603 aa12.5□□□□□ -0.41
VCP-204ENST00000466100 KCNK18Q7Z418 384 aa12.5□□□□□ -0.41
VCP-204ENST00000466100 TRIM50Q86XT4 487 aa12.5□□□□□ -0.41
VCP-204ENST00000466100 BANK1Q8NDB2 785 aa12.5□□□□□ -0.41
VCP-204ENST00000466100 ENGASEQ8NFI3 743 aa12.5□□□□□ -0.41
VCP-204ENST00000466100 ERMNQ8TAM6 284 aa12.5□□□□□ -0.41
VCP-204ENST00000466100 C16orf70Q9BSU1 422 aa12.5□□□□□ -0.41
VCP-204ENST00000466100 MCOLN1Q9GZU1 580 aa12.5□□□□□ -0.41
VCP-204ENST00000466100 AP5M1Q9H0R1 490 aa12.5□□□□□ -0.41
VCP-204ENST00000466100 GABBR1Q9UBS5 961 aa12.5□□□□□ -0.41
VCP-204ENST00000466100 SAMM50Q9Y512 469 aa12.5□□□□□ -0.41
VCP-204ENST00000466100 MAFBQ9Y5Q3 323 aaPredicted RBP12.5□□□□□ -0.41
VCP-204ENST00000466100 KDM3AQ9Y4C1 1321 aa12.5□□□□□ -0.41
VCP-204ENST00000466100 EVPLQ92817 2033 aa12.49□□□□□ -0.41
VCP-204ENST00000466100 MYH11P35749 1972 aa12.49□□□□□ -0.41
VCP-204ENST00000466100 GOLGA6L22H0YM25 854 aa12.49□□□□□ -0.41
VCP-204ENST00000466100 F2P00734 622 aa12.49□□□□□ -0.41
VCP-204ENST00000466100 C6orf222P0C671 652 aaPredicted RBP12.49□□□□□ -0.41
VCP-204ENST00000466100 LIG1P18858 919 aa12.49□□□□□ -0.41
VCP-204ENST00000466100 PLCG1P19174 1290 aa12.49□□□□□ -0.41
VCP-204ENST00000466100 QARSP47897 775 aaKnown RBP12.49□□□□□ -0.41
VCP-204ENST00000466100 PSMC5P62195 406 aa12.49□□□□□ -0.41
VCP-204ENST00000466100 SNW1Q13573 536 aaKnown RBP12.49□□□□□ -0.41
VCP-204ENST00000466100 CTTNQ14247 550 aaKnown RBP12.49□□□□□ -0.41
VCP-204ENST00000466100 LRRC41Q15345 812 aa12.49□□□□□ -0.41
VCP-204ENST00000466100 DGKDQ16760 1214 aa12.49□□□□□ -0.41
VCP-204ENST00000466100 SWSAP1Q6NVH7 229 aa12.49□□□□□ -0.41
VCP-204ENST00000466100 POTEGQ6S5H5 508 aa12.49□□□□□ -0.41
VCP-204ENST00000466100 PLPPR4Q7Z2D5 763 aa12.49□□□□□ -0.41
VCP-204ENST00000466100 FMR1NBQ8N0W7 255 aaPredicted RBP12.49□□□□□ -0.41
VCP-204ENST00000466100 KAT2BQ92831 832 aa12.49□□□□□ -0.41
VCP-204ENST00000466100 DDX11L8A8MPP1 907 aa12.48□□□□□ -0.41
VCP-204ENST00000466100 BACH1O14867 736 aa12.48□□□□□ -0.41
VCP-204ENST00000466100 ZNF286BP0CG31 522 aa12.48□□□□□ -0.41
VCP-204ENST00000466100 TXLNAP40222 546 aa12.48□□□□□ -0.41
VCP-204ENST00000466100 STAT5BP51692 787 aa12.48□□□□□ -0.41
VCP-204ENST00000466100 PSMC6P62333 389 aa12.48□□□□□ -0.41
VCP-204ENST00000466100 PURAQ00577 322 aaKnown RBP12.48□□□□□ -0.41
VCP-204ENST00000466100 PRKCEQ02156 737 aa12.48□□□□□ -0.41
VCP-204ENST00000466100 UTP14CQ5TAP6 766 aaKnown RBP12.48□□□□□ -0.41
VCP-204ENST00000466100 FAM160B1Q5W0V3 765 aa12.48□□□□□ -0.41
VCP-204ENST00000466100 C4orf19Q8IY42 314 aa12.48□□□□□ -0.41
VCP-204ENST00000466100 GPT2Q8TD30 523 aa12.48□□□□□ -0.41
VCP-204ENST00000466100 ATP6V0A1Q93050 837 aa12.48□□□□□ -0.41
VCP-204ENST00000466100 CRISPLD2Q9H0B8 497 aa12.48□□□□□ -0.41
VCP-204ENST00000466100 NT5C3AQ9H0P0 336 aa12.48□□□□□ -0.41
VCP-204ENST00000466100 RNF208Q9H0X6 261 aa12.48□□□□□ -0.41
VCP-204ENST00000466100 SMARCAD1Q9H4L7 1026 aa12.48□□□□□ -0.41
VCP-204ENST00000466100 ZSWIM4Q9H7M6 989 aa12.48□□□□□ -0.41
VCP-204ENST00000466100 SPC25Q9HBM1 224 aa12.48□□□□□ -0.41
VCP-204ENST00000466100 ZNF302Q9NR11 478 aa12.48□□□□□ -0.41
VCP-204ENST00000466100 BLOC1S4Q9NUP1 217 aa12.48□□□□□ -0.41
VCP-204ENST00000466100 DDX19AQ9NUU7 478 aaKnown RBP12.48□□□□□ -0.41
VCP-204ENST00000466100 FAM13BQ9NYF5 915 aa12.48□□□□□ -0.41
VCP-204ENST00000466100 OGDHLQ9ULD0 1010 aa12.48□□□□□ -0.41
VCP-204ENST00000466100 KCNH3Q9ULD8 1083 aa12.48□□□□□ -0.41
VCP-204ENST00000466100 GOLGA6L4A6NEF3 574 aa12.47□□□□□ -0.41
VCP-204ENST00000466100 HAS3O00219 553 aa12.47□□□□□ -0.41
VCP-204ENST00000466100 ZBTB39O15060 712 aa12.47□□□□□ -0.41
VCP-204ENST00000466100 POLR2DO15514 142 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms