RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 CDK5RAP1Q96SZ6 601 aaKnown RBP10.31□□□□□ -0.76
SCAF11-205ENST00000465950 PPRC1Q5VV67 1664 aaKnown RBP10.31□□□□□ -0.76
SCAF11-205ENST00000465950 E7EWF7 191 aa10.31□□□□□ -0.76
SCAF11-205ENST00000465950 CRCPO75575 148 aa10.31□□□□□ -0.76
SCAF11-205ENST00000465950 CSPG5O95196 566 aa10.31□□□□□ -0.76
SCAF11-205ENST00000465950 DDX5P17844 614 aaKnown RBP10.31□□□□□ -0.76
SCAF11-205ENST00000465950 EPHB1P54762 984 aa10.31□□□□□ -0.76
SCAF11-205ENST00000465950 HERVK_113P62684 666 aa10.31□□□□□ -0.76
SCAF11-205ENST00000465950 PRPF4BQ13523 1007 aaKnown RBP10.31□□□□□ -0.76
SCAF11-205ENST00000465950 STILQ15468 1287 aa10.31□□□□□ -0.76
SCAF11-205ENST00000465950 NT5C1BQ96P26 610 aa10.31□□□□□ -0.76
SCAF11-205ENST00000465950 FEZ2Q9UHY8 353 aaPredicted RBP10.31□□□□□ -0.76
SCAF11-205ENST00000465950 TMX2Q9Y320 296 aa10.31□□□□□ -0.76
SCAF11-205ENST00000465950 PDS5AQ29RF7 1337 aaKnown RBP10.31□□□□□ -0.76
SCAF11-205ENST00000465950 ITSN1Q15811 1721 aa10.3□□□□□ -0.76
SCAF11-205ENST00000465950 ZBTB7BO15156 539 aaPredicted RBP10.3□□□□□ -0.76
SCAF11-205ENST00000465950 SEC24BO95487 1268 aa10.3□□□□□ -0.76
SCAF11-205ENST00000465950 TGFB3P10600 412 aa10.3□□□□□ -0.76
SCAF11-205ENST00000465950 MFAP3P55082 362 aa10.3□□□□□ -0.76
SCAF11-205ENST00000465950 PTK2Q05397 1052 aa10.3□□□□□ -0.76
SCAF11-205ENST00000465950 CKAP4Q07065 602 aaKnown RBP10.3□□□□□ -0.76
SCAF11-205ENST00000465950 INTS5Q6P9B9 1019 aaKnown RBP10.3□□□□□ -0.76
SCAF11-205ENST00000465950 NT5DC4Q86YG4 428 aa10.3□□□□□ -0.76
SCAF11-205ENST00000465950 C11orf49Q9H6J7 331 aa10.3□□□□□ -0.76
SCAF11-205ENST00000465950 SLC9A3R1O14745 358 aaPredicted RBP10.3□□□□□ -0.76
SCAF11-205ENST00000465950 ORC4O43929 436 aa10.3□□□□□ -0.76
SCAF11-205ENST00000465950 MARK3P27448 753 aa10.3□□□□□ -0.76
SCAF11-205ENST00000465950 EPHB3P54753 998 aa10.3□□□□□ -0.76
SCAF11-205ENST00000465950 KRT81Q14533 505 aa10.3□□□□□ -0.76
SCAF11-205ENST00000465950 SPATA2LQ8IUW3 424 aaPredicted RBP10.3□□□□□ -0.76
SCAF11-205ENST00000465950 UBL4BQ8N7F7 174 aa10.3□□□□□ -0.76
SCAF11-205ENST00000465950 SLC44A5Q8NCS7 719 aa10.3□□□□□ -0.76
SCAF11-205ENST00000465950 POP1Q99575 1024 aaKnown RBP10.3□□□□□ -0.76
SCAF11-205ENST00000465950 TSGA10Q9BZW7 698 aa10.3□□□□□ -0.76
SCAF11-205ENST00000465950 INCENPQ9NQS7 918 aa10.3□□□□□ -0.76
SCAF11-205ENST00000465950 UTP6Q9NYH9 597 aaKnown RBP10.3□□□□□ -0.76
SCAF11-205ENST00000465950 PIN4Q9Y237 131 aaKnown RBP10.3□□□□□ -0.76
SCAF11-205ENST00000465950 SRGAP2CP0DJJ0 459 aa10.3□□□□□ -0.76
SCAF11-205ENST00000465950 IFNAR2P48551 515 aa10.3□□□□□ -0.76
SCAF11-205ENST00000465950 ALX1Q15699 326 aa10.3□□□□□ -0.76
SCAF11-205ENST00000465950 DISP2A7MBM2 1401 aa10.3□□□□□ -0.76
SCAF11-205ENST00000465950 PER1O15534 1290 aaPredicted RBP10.3□□□□□ -0.76
SCAF11-205ENST00000465950 S100BP04271 92 aaPredicted RBP10.3□□□□□ -0.76
SCAF11-205ENST00000465950 SLC12A2P55011 1212 aa10.3□□□□□ -0.76
SCAF11-205ENST00000465950 ZNF827Q17R98 1081 aa10.3□□□□□ -0.76
SCAF11-205ENST00000465950 ZNF667Q5HYK9 610 aa10.3□□□□□ -0.76
SCAF11-205ENST00000465950 TTBK2Q6IQ55 1244 aa10.3□□□□□ -0.76
SCAF11-205ENST00000465950 RINT1Q6NUQ1 792 aa10.3□□□□□ -0.76
SCAF11-205ENST00000465950 FBXO46Q6PJ61 603 aaPredicted RBP10.3□□□□□ -0.76
SCAF11-205ENST00000465950 CNPY4Q8N129 248 aa10.3□□□□□ -0.76
SCAF11-205ENST00000465950 USP38Q8NB14 1042 aa10.3□□□□□ -0.76
SCAF11-205ENST00000465950 MSTO1Q9BUK6 570 aa10.3□□□□□ -0.76
SCAF11-205ENST00000465950 PRMT7Q9NVM4 692 aaPredicted RBP10.3□□□□□ -0.76
SCAF11-205ENST00000465950 TBC1D7Q9P0N9 293 aa10.3□□□□□ -0.76
SCAF11-205ENST00000465950 CLDN3O15551 220 aa10.29□□□□□ -0.76
SCAF11-205ENST00000465950 TACC1O75410 805 aa10.29□□□□□ -0.76
SCAF11-205ENST00000465950 QARSP47897 775 aaKnown RBP10.29□□□□□ -0.76
SCAF11-205ENST00000465950 NOTUMQ6P988 496 aa10.29□□□□□ -0.76
SCAF11-205ENST00000465950 GPR161Q8N6U8 529 aaKnown RBP10.29□□□□□ -0.76
SCAF11-205ENST00000465950 CCDC89Q8N998 374 aa10.29□□□□□ -0.76
SCAF11-205ENST00000465950 ATL2Q8NHH9 583 aa10.29□□□□□ -0.76
SCAF11-205ENST00000465950 PCDHA6Q9UN73 950 aa10.29□□□□□ -0.76
SCAF11-205ENST00000465950 PCDHA8Q9Y5H6 950 aa10.29□□□□□ -0.76
SCAF11-205ENST00000465950 POTEB3A0JP26 581 aa10.29□□□□□ -0.76
SCAF11-205ENST00000465950 XRCC5P13010 732 aaKnown RBP10.29□□□□□ -0.76
SCAF11-205ENST00000465950 POTEBQ6S5H4 581 aa10.29□□□□□ -0.76
SCAF11-205ENST00000465950 MTMR14Q8NCE2 650 aa10.29□□□□□ -0.76
SCAF11-205ENST00000465950 LRRC2Q9BYS8 371 aa10.29□□□□□ -0.76
SCAF11-205ENST00000465950 PRMT3O60678 531 aa10.29□□□□□ -0.76
SCAF11-205ENST00000465950 NDUFV1P49821 464 aa10.29□□□□□ -0.76
SCAF11-205ENST00000465950 FAM110CQ1W6H9 321 aa10.29□□□□□ -0.76
SCAF11-205ENST00000465950 ZNF568Q3ZCX4 644 aa10.29□□□□□ -0.76
SCAF11-205ENST00000465950 SCN4BQ8IWT1 228 aa10.29□□□□□ -0.76
SCAF11-205ENST00000465950 ZNF512Q96ME7 567 aaPredicted RBP10.29□□□□□ -0.76
SCAF11-205ENST00000465950 PANK2Q9BZ23 570 aa10.29□□□□□ -0.76
SCAF11-205ENST00000465950 KIAA1683Q9H0B3 1180 aa10.29□□□□□ -0.76
SCAF11-205ENST00000465950 UXTQ9UBK9 157 aaPredicted RBP10.29□□□□□ -0.76
SCAF11-205ENST00000465950 SEL1LQ9UBV2 794 aa10.29□□□□□ -0.76
SCAF11-205ENST00000465950 FNDC3AQ9Y2H6 1198 aaKnown RBP10.29□□□□□ -0.76
SCAF11-205ENST00000465950 USP32Q8NFA0 1604 aa10.29□□□□□ -0.76
SCAF11-205ENST00000465950 GPR75-ASB3A0A0A6YYF3 556 aa10.29□□□□□ -0.76
SCAF11-205ENST00000465950 THAP12O43422 761 aa10.29□□□□□ -0.76
SCAF11-205ENST00000465950 USP11P51784 963 aa10.29□□□□□ -0.76
SCAF11-205ENST00000465950 KPNA1P52294 538 aaPredicted RBP10.29□□□□□ -0.76
SCAF11-205ENST00000465950 PPP4CP60510 307 aa10.29□□□□□ -0.76
SCAF11-205ENST00000465950 RAPGEF1Q13905 1077 aa10.29□□□□□ -0.76
SCAF11-205ENST00000465950 PROSER3Q2NL68 480 aa10.29□□□□□ -0.76
SCAF11-205ENST00000465950 LGSNQ5TDP6 509 aa10.29□□□□□ -0.76
SCAF11-205ENST00000465950 FBXO33Q7Z6M2 555 aa10.29□□□□□ -0.76
SCAF11-205ENST00000465950 SMC5Q8IY18 1101 aa10.29□□□□□ -0.76
SCAF11-205ENST00000465950 SCFD1Q8WVM8 642 aa10.29□□□□□ -0.76
SCAF11-205ENST00000465950 DISC1Q9NRI5 854 aa10.29□□□□□ -0.76
SCAF11-205ENST00000465950 FAM205AQ6ZU69 1335 aa10.28□□□□□ -0.76
SCAF11-205ENST00000465950 POMCP01189 267 aa10.28□□□□□ -0.76
SCAF11-205ENST00000465950 LIFRP42702 1097 aa10.28□□□□□ -0.76
SCAF11-205ENST00000465950 C1QTNF8P60827 252 aa10.28□□□□□ -0.76
SCAF11-205ENST00000465950 CYP4F22Q6NT55 531 aa10.28□□□□□ -0.76
SCAF11-205ENST00000465950 INTS4Q96HW7 963 aaKnown RBP10.28□□□□□ -0.76
SCAF11-205ENST00000465950 PKNOX2Q96KN3 472 aa10.28□□□□□ -0.76
SCAF11-205ENST00000465950 PIGSQ96S52 555 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms