RNA–Protein interactions for RNA: ENST00000465673.5

GPNMB-206, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-206ENST00000465673 RBM10P98175 930 aaKnown RBP11.88□□□□□ -0.51
GPNMB-206ENST00000465673 TRDNQ13061 729 aa11.88□□□□□ -0.51
GPNMB-206ENST00000465673 ADAM15Q13444 863 aa11.88□□□□□ -0.51
GPNMB-206ENST00000465673 SMAD4Q13485 552 aaKnown RBP11.88□□□□□ -0.51
GPNMB-206ENST00000465673 COL9A3Q14050 684 aaPredicted RBP11.88□□□□□ -0.51
GPNMB-206ENST00000465673 HERC4Q5GLZ8 1057 aaPredicted RBP11.88□□□□□ -0.51
GPNMB-206ENST00000465673 IER5LQ5T953 404 aa11.88□□□□□ -0.51
GPNMB-206ENST00000465673 RBM23Q86U06 439 aaKnown RBP11.88□□□□□ -0.51
GPNMB-206ENST00000465673 TRAPPC12Q8WVT3 735 aa11.88□□□□□ -0.51
GPNMB-206ENST00000465673 SENP7Q9BQF6 1050 aa11.88□□□□□ -0.51
GPNMB-206ENST00000465673 UPF3BQ9BZI7 483 aaKnown RBP11.88□□□□□ -0.51
GPNMB-206ENST00000465673 LMAN2LQ9H0V9 348 aa11.88□□□□□ -0.51
GPNMB-206ENST00000465673 CLEC1BQ9P126 229 aa11.88□□□□□ -0.51
GPNMB-206ENST00000465673 CD207Q9UJ71 328 aa11.88□□□□□ -0.51
GPNMB-206ENST00000465673 TUBE1Q9UJT0 475 aa11.88□□□□□ -0.51
GPNMB-206ENST00000465673 ERICH2A1L162 156 aa11.87□□□□□ -0.51
GPNMB-206ENST00000465673 NCK2O43639 380 aa11.87□□□□□ -0.51
GPNMB-206ENST00000465673 PPFIA3O75145 1194 aa11.87□□□□□ -0.51
GPNMB-206ENST00000465673 PLEKHA8P1O95397 391 aa11.87□□□□□ -0.51
GPNMB-206ENST00000465673 ITGB1P05556 798 aa11.87□□□□□ -0.51
GPNMB-206ENST00000465673 PDE4AP27815 886 aa11.87□□□□□ -0.51
GPNMB-206ENST00000465673 NDUFV1P49821 464 aa11.87□□□□□ -0.51
GPNMB-206ENST00000465673 MRPS6P82932 125 aaKnown RBP11.87□□□□□ -0.51
GPNMB-206ENST00000465673 TRAF1Q13077 416 aa11.87□□□□□ -0.51
GPNMB-206ENST00000465673 UBE2SQ16763 222 aa11.87□□□□□ -0.51
GPNMB-206ENST00000465673 TAF2Q6P1X5 1199 aa11.87□□□□□ -0.51
GPNMB-206ENST00000465673 CATIPQ7Z7H3 387 aa11.87□□□□□ -0.51
GPNMB-206ENST00000465673 NLRX1Q86UT6 975 aa11.87□□□□□ -0.51
GPNMB-206ENST00000465673 CRIPAKQ8N1N5 446 aa11.87□□□□□ -0.51
GPNMB-206ENST00000465673 KLHL23Q8NBE8 558 aa11.87□□□□□ -0.51
GPNMB-206ENST00000465673 EXOC6Q8TAG9 804 aa11.87□□□□□ -0.51
GPNMB-206ENST00000465673 SPPL3Q8TCT6 385 aa11.87□□□□□ -0.51
GPNMB-206ENST00000465673 IGDCC4Q8TDY8 1250 aa11.87□□□□□ -0.51
GPNMB-206ENST00000465673 GLG1Q92896 1179 aa11.87□□□□□ -0.51
GPNMB-206ENST00000465673 MSLNLQ96KJ4 702 aa11.87□□□□□ -0.51
GPNMB-206ENST00000465673 PCYT2Q99447 389 aa11.87□□□□□ -0.51
GPNMB-206ENST00000465673 TTC3P53804 2025 aa11.87□□□□□ -0.51
GPNMB-206ENST00000465673 KAT6AQ92794 2004 aa11.86□□□□□ -0.51
GPNMB-206ENST00000465673 MBLAC1A4D2B0 266 aaPredicted RBP11.86□□□□□ -0.51
GPNMB-206ENST00000465673 INSRRP14616 1297 aa11.86□□□□□ -0.51
GPNMB-206ENST00000465673 RXRAP19793 462 aa11.86□□□□□ -0.51
GPNMB-206ENST00000465673 NRIP1P48552 1158 aa11.86□□□□□ -0.51
GPNMB-206ENST00000465673 TSHZ1Q6ZSZ6 1077 aa11.86□□□□□ -0.51
GPNMB-206ENST00000465673 RALYLQ86SE5 291 aaKnown RBP11.86□□□□□ -0.51
GPNMB-206ENST00000465673 RSPH3Q86UC2 560 aa11.86□□□□□ -0.51
GPNMB-206ENST00000465673 RAB11FIP4Q86YS3 637 aa11.86□□□□□ -0.51
GPNMB-206ENST00000465673 SRBD1Q8N5C6 995 aaKnown RBP11.86□□□□□ -0.51
GPNMB-206ENST00000465673 PRSS33Q8NF86 280 aa11.86□□□□□ -0.51
GPNMB-206ENST00000465673 POF1BQ8WVV4 589 aa11.86□□□□□ -0.51
GPNMB-206ENST00000465673 SEPT1Q8WYJ6 367 aa11.86□□□□□ -0.51
GPNMB-206ENST00000465673 EDAQ92838 391 aa11.86□□□□□ -0.51
GPNMB-206ENST00000465673 CUL5Q93034 780 aa11.86□□□□□ -0.51
GPNMB-206ENST00000465673 RRP36Q96EU6 259 aaKnown RBP11.86□□□□□ -0.51
GPNMB-206ENST00000465673 MFSD14AQ96MC6 490 aa11.86□□□□□ -0.51
GPNMB-206ENST00000465673 ERAP1Q9NZ08 941 aa11.86□□□□□ -0.51
GPNMB-206ENST00000465673 BARX2Q9UMQ3 279 aaPredicted RBP11.86□□□□□ -0.51
GPNMB-206ENST00000465673 RWDD3Q9Y3V2 267 aa11.86□□□□□ -0.51
GPNMB-206ENST00000465673 U3KPZ7 1027 aaPredicted RBP11.86□□□□□ -0.51
GPNMB-206ENST00000465673 PIK3CDO00329 1044 aa11.85□□□□□ -0.51
GPNMB-206ENST00000465673 PER2O15055 1255 aa11.85□□□□□ -0.51
GPNMB-206ENST00000465673 GLP2RO95838 553 aa11.85□□□□□ -0.51
GPNMB-206ENST00000465673 TMEM266Q2M3C6 531 aa11.85□□□□□ -0.51
GPNMB-206ENST00000465673 MB21D2Q8IYB1 491 aaPredicted RBP11.85□□□□□ -0.51
GPNMB-206ENST00000465673 ZNF654Q8IZM8 581 aa11.85□□□□□ -0.51
GPNMB-206ENST00000465673 NCOA7Q8NI08 942 aa11.85□□□□□ -0.51
GPNMB-206ENST00000465673 GPRASP2Q96D09 838 aa11.85□□□□□ -0.51
GPNMB-206ENST00000465673 POP1Q99575 1024 aaKnown RBP11.85□□□□□ -0.51
GPNMB-206ENST00000465673 PLVAPQ9BX97 442 aa11.85□□□□□ -0.51
GPNMB-206ENST00000465673 SPZ1Q9BXG8 430 aa11.85□□□□□ -0.51
GPNMB-206ENST00000465673 TMX1Q9H3N1 280 aa11.85□□□□□ -0.51
GPNMB-206ENST00000465673 LY9Q9HBG7 655 aa11.85□□□□□ -0.51
GPNMB-206ENST00000465673 HCSTQ9UBK5 93 aa11.85□□□□□ -0.51
GPNMB-206ENST00000465673 PADI3Q9ULW8 664 aa11.85□□□□□ -0.51
GPNMB-206ENST00000465673 UBIAD1Q9Y5Z9 338 aa11.85□□□□□ -0.51
GPNMB-206ENST00000465673 TMEM221A6NGB7 291 aa11.84□□□□□ -0.51
GPNMB-206ENST00000465673 M0R296 226 aa11.84□□□□□ -0.51
GPNMB-206ENST00000465673 EYA4O95677 639 aa11.84□□□□□ -0.51
GPNMB-206ENST00000465673 CHMLP26374 656 aa11.84□□□□□ -0.51
GPNMB-206ENST00000465673 MTMR1Q13613 665 aa11.84□□□□□ -0.51
GPNMB-206ENST00000465673 XRRA1Q6P2D8 792 aa11.84□□□□□ -0.51
GPNMB-206ENST00000465673 TRIM67Q6ZTA4 783 aa11.84□□□□□ -0.51
GPNMB-206ENST00000465673 NPAS4Q8IUM7 802 aa11.84□□□□□ -0.51
GPNMB-206ENST00000465673 CMTR2Q8IYT2 770 aaKnown RBP11.84□□□□□ -0.51
GPNMB-206ENST00000465673 CCDC82Q8N4S0 544 aa11.84□□□□□ -0.51
GPNMB-206ENST00000465673 EFHBQ8N7U6 833 aa11.84□□□□□ -0.51
GPNMB-206ENST00000465673 SMRP1Q8NCR6 262 aa11.84□□□□□ -0.51
GPNMB-206ENST00000465673 GIMAP8Q8ND71 665 aaPredicted RBP11.84□□□□□ -0.51
GPNMB-206ENST00000465673 VN1R2Q8NFZ6 395 aa11.84□□□□□ -0.51
GPNMB-206ENST00000465673 CYP2W1Q8TAV3 490 aa11.84□□□□□ -0.51
GPNMB-206ENST00000465673 P2RX5Q93086 422 aa11.84□□□□□ -0.51
GPNMB-206ENST00000465673 PBXIP1Q96AQ6 731 aa11.84□□□□□ -0.51
GPNMB-206ENST00000465673 KCNH6Q9H252 994 aa11.84□□□□□ -0.51
GPNMB-206ENST00000465673 SMARCAD1Q9H4L7 1026 aa11.84□□□□□ -0.51
GPNMB-206ENST00000465673 PSTPIP2Q9H939 334 aa11.84□□□□□ -0.51
GPNMB-206ENST00000465673 CDHR5Q9HBB8 845 aa11.84□□□□□ -0.51
GPNMB-206ENST00000465673 USP15Q9Y4E8 981 aaPredicted RBP11.84□□□□□ -0.51
GPNMB-206ENST00000465673 TRPV2Q9Y5S1 764 aa11.84□□□□□ -0.51
GPNMB-206ENST00000465673 KIAA1671Q9BY89 1806 aa11.83□□□□□ -0.51
GPNMB-206ENST00000465673 LOC730098B7Z3J9 87 aa11.83□□□□□ -0.52
GPNMB-206ENST00000465673 MGEA5O60502 916 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms