RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 MTERF2Q49AM1 385 aa8.06□□□□□ -1.12
SMC4-205ENST00000465563 ARHGAP36Q6ZRI8 547 aa8.06□□□□□ -1.12
SMC4-205ENST00000465563 Q8TCH9 128 aa8.06□□□□□ -1.12
SMC4-205ENST00000465563 PTPRN2Q92932 1015 aa8.06□□□□□ -1.12
SMC4-205ENST00000465563 LMF1Q96S06 567 aa8.06□□□□□ -1.12
SMC4-205ENST00000465563 SLC39A2Q9NP94 309 aa8.06□□□□□ -1.12
SMC4-205ENST00000465563 IGSF5Q9NSI5 407 aa8.06□□□□□ -1.12
SMC4-205ENST00000465563 SRPK3Q9UPE1 567 aa8.06□□□□□ -1.12
SMC4-205ENST00000465563 WNT9AO14904 365 aa8.05□□□□□ -1.12
SMC4-205ENST00000465563 MUSKO15146 869 aa8.05□□□□□ -1.12
SMC4-205ENST00000465563 ADCY3O60266 1144 aa8.05□□□□□ -1.12
SMC4-205ENST00000465563 SUMO1P63165 101 aaKnown RBP8.05□□□□□ -1.12
SMC4-205ENST00000465563 RASGRF1Q13972 1273 aa8.05□□□□□ -1.12
SMC4-205ENST00000465563 DPP8Q6V1X1 898 aaPredicted RBP8.05□□□□□ -1.12
SMC4-205ENST00000465563 FBXW5Q969U6 566 aa8.05□□□□□ -1.12
SMC4-205ENST00000465563 CARD11Q9BXL7 1154 aa8.05□□□□□ -1.12
SMC4-205ENST00000465563 CATSPERZQ9NTU4 200 aa8.05□□□□□ -1.12
SMC4-205ENST00000465563 RIC8BQ9NVN3 520 aa8.05□□□□□ -1.12
SMC4-205ENST00000465563 TRBV23-1A0A0A0MS06 115 aa8.04□□□□□ -1.12
SMC4-205ENST00000465563 PTPN1P18031 435 aaKnown RBP8.04□□□□□ -1.12
SMC4-205ENST00000465563 POLD1P28340 1107 aa8.04□□□□□ -1.12
SMC4-205ENST00000465563 GDF5P43026 501 aa8.04□□□□□ -1.12
SMC4-205ENST00000465563 SSRP1Q08945 709 aaKnown RBP8.04□□□□□ -1.12
SMC4-205ENST00000465563 ZNF568Q3ZCX4 644 aa8.04□□□□□ -1.12
SMC4-205ENST00000465563 HS1BP3Q53T59 392 aa8.04□□□□□ -1.12
SMC4-205ENST00000465563 EP400NLQ6ZTU2 488 aa8.04□□□□□ -1.12
SMC4-205ENST00000465563 ZBTB38Q8NAP3 1195 aaPredicted RBP8.04□□□□□ -1.12
SMC4-205ENST00000465563 GNRHR2Q96P88 292 aa8.04□□□□□ -1.12
SMC4-205ENST00000465563 LRRC37BQ96QE4 947 aa8.04□□□□□ -1.12
SMC4-205ENST00000465563 CCDC113Q9H0I3 377 aa8.04□□□□□ -1.12
SMC4-205ENST00000465563 ARHGAP28Q9P2N2 729 aa8.04□□□□□ -1.12
SMC4-205ENST00000465563 PPP1R1BQ9UD71 204 aaPredicted RBP8.04□□□□□ -1.12
SMC4-205ENST00000465563 PFDN2Q9UHV9 154 aa8.04□□□□□ -1.12
SMC4-205ENST00000465563 FAM90A27PA6NNH2 459 aa8.03□□□□□ -1.12
SMC4-205ENST00000465563 CUTAO60888 179 aa8.03□□□□□ -1.12
SMC4-205ENST00000465563 ZNF888P0CJ79 500 aaPredicted RBP8.03□□□□□ -1.12
SMC4-205ENST00000465563 NAT1P18440 290 aa8.03□□□□□ -1.12
SMC4-205ENST00000465563 GUCY1A3Q02108 690 aa8.03□□□□□ -1.12
SMC4-205ENST00000465563 R3HDM1Q15032 1099 aaKnown RBP8.03□□□□□ -1.12
SMC4-205ENST00000465563 FAM209AQ5JX71 171 aa8.03□□□□□ -1.12
SMC4-205ENST00000465563 TCTN3Q6NUS6 607 aa8.03□□□□□ -1.12
SMC4-205ENST00000465563 CRIP3Q6Q6R5 217 aa8.03□□□□□ -1.12
SMC4-205ENST00000465563 GIMAP8Q8ND71 665 aaPredicted RBP8.03□□□□□ -1.12
SMC4-205ENST00000465563 PCDH19Q8TAB3 1148 aa8.03□□□□□ -1.12
SMC4-205ENST00000465563 TESMINQ9Y4I5 508 aa8.03□□□□□ -1.12
SMC4-205ENST00000465563 PCDHA8Q9Y5H6 950 aa8.03□□□□□ -1.12
SMC4-205ENST00000465563 ATP23Q9Y6H3 246 aa8.03□□□□□ -1.12
SMC4-205ENST00000465563 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.02□□□□□ -1.13
SMC4-205ENST00000465563 ESYT3A0FGR9 886 aa8.02□□□□□ -1.13
SMC4-205ENST00000465563 CCDC85CA6NKD9 419 aa8.02□□□□□ -1.13
SMC4-205ENST00000465563 PDE6AP16499 860 aa8.02□□□□□ -1.13
SMC4-205ENST00000465563 GJA4P35212 333 aa8.02□□□□□ -1.13
SMC4-205ENST00000465563 ZC3H6P61129 1189 aaKnown RBP8.02□□□□□ -1.13
SMC4-205ENST00000465563 ST5P78524 1137 aa8.02□□□□□ -1.13
SMC4-205ENST00000465563 FIGNQ5HY92 759 aa8.02□□□□□ -1.13
SMC4-205ENST00000465563 C16orf59Q7L2K0 433 aa8.02□□□□□ -1.13
SMC4-205ENST00000465563 OSTM1Q86WC4 334 aa8.02□□□□□ -1.13
SMC4-205ENST00000465563 NEIL1Q96FI4 390 aaPredicted RBP8.02□□□□□ -1.13
SMC4-205ENST00000465563 ZNF747Q9BV97 191 aa8.02□□□□□ -1.13
SMC4-205ENST00000465563 VPS11Q9H270 941 aa8.02□□□□□ -1.13
SMC4-205ENST00000465563 PTPN22Q9Y2R2 807 aa8.02□□□□□ -1.13
SMC4-205ENST00000465563 ARVCFO00192 962 aa8.01□□□□□ -1.13
SMC4-205ENST00000465563 MAN2B1O00754 1011 aa8.01□□□□□ -1.13
SMC4-205ENST00000465563 GSTA4O15217 222 aa8.01□□□□□ -1.13
SMC4-205ENST00000465563 FOXS1O43638 330 aa8.01□□□□□ -1.13
SMC4-205ENST00000465563 AMHP03971 560 aa8.01□□□□□ -1.13
SMC4-205ENST00000465563 AMY2AP04746 511 aa8.01□□□□□ -1.13
SMC4-205ENST00000465563 C6orf222P0C671 652 aaPredicted RBP8.01□□□□□ -1.13
SMC4-205ENST00000465563 PYGMP11217 842 aa8.01□□□□□ -1.13
SMC4-205ENST00000465563 AMY2BP19961 511 aa8.01□□□□□ -1.13
SMC4-205ENST00000465563 GABREP78334 506 aa8.01□□□□□ -1.13
SMC4-205ENST00000465563 TOP3AQ13472 1001 aaPredicted RBP8.01□□□□□ -1.13
SMC4-205ENST00000465563 SPDYAQ5MJ70 313 aa8.01□□□□□ -1.13
SMC4-205ENST00000465563 NBPF6Q5VWK0 638 aa8.01□□□□□ -1.13
SMC4-205ENST00000465563 FOXB2Q5VYV0 432 aa8.01□□□□□ -1.13
SMC4-205ENST00000465563 TAX1BP1Q86VP1 789 aa8.01□□□□□ -1.13
SMC4-205ENST00000465563 PTRH1Q86Y79 214 aaKnown RBP8.01□□□□□ -1.13
SMC4-205ENST00000465563 Q8N1X5 172 aa8.01□□□□□ -1.13
SMC4-205ENST00000465563 NBPF4Q96M43 638 aa8.01□□□□□ -1.13
SMC4-205ENST00000465563 SORCS2Q96PQ0 1159 aa8.01□□□□□ -1.13
SMC4-205ENST00000465563 SRGAP2CP0DJJ0 459 aa8□□□□□ -1.13
SMC4-205ENST00000465563 KRT15P19012 456 aa8□□□□□ -1.13
SMC4-205ENST00000465563 RAC3P60763 192 aa8□□□□□ -1.13
SMC4-205ENST00000465563 CRY1Q16526 586 aa8□□□□□ -1.13
SMC4-205ENST00000465563 WDR72Q3MJ13 1102 aa8□□□□□ -1.13
SMC4-205ENST00000465563 NAALADL2Q58DX5 795 aa8□□□□□ -1.13
SMC4-205ENST00000465563 SCAND2PQ9GZW5 306 aaPredicted RBP8□□□□□ -1.13
SMC4-205ENST00000465563 CBLCQ9ULV8 474 aa8□□□□□ -1.13
SMC4-205ENST00000465563 ZFR2Q9UPR6 939 aaKnown RBP8□□□□□ -1.13
SMC4-205ENST00000465563 E9PSI1 815 aa7.99□□□□□ -1.13
SMC4-205ENST00000465563 DIAPH1O60610 1272 aaKnown RBP7.99□□□□□ -1.13
SMC4-205ENST00000465563 FZD7O75084 574 aa7.99□□□□□ -1.13
SMC4-205ENST00000465563 PTGS1P23219 599 aa7.99□□□□□ -1.13
SMC4-205ENST00000465563 JAM2P57087 298 aa7.99□□□□□ -1.13
SMC4-205ENST00000465563 ZMAT1Q5H9K5 638 aa7.99□□□□□ -1.13
SMC4-205ENST00000465563 FAM47CQ5HY64 1035 aa7.99□□□□□ -1.13
SMC4-205ENST00000465563 USP51Q70EK9 711 aa7.99□□□□□ -1.13
SMC4-205ENST00000465563 SIRPGQ9P1W8 387 aa7.99□□□□□ -1.13
SMC4-205ENST00000465563 PCDHA9Q9Y5H5 950 aa7.99□□□□□ -1.13
SMC4-205ENST00000465563 FAM153BP0C7A2 387 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms