RNA–Protein interactions for RNA: ENST00000465552.1

CTNNB1-211, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-211ENST00000465552 SHHQ15465 462 aa11.27□□□□□ -0.61
CTNNB1-211ENST00000465552 LETM2Q2VYF4 491 aa11.27□□□□□ -0.61
CTNNB1-211ENST00000465552 EARS2Q5JPH6 523 aaKnown RBP11.27□□□□□ -0.61
CTNNB1-211ENST00000465552 KRT40Q6A162 431 aa11.27□□□□□ -0.61
CTNNB1-211ENST00000465552 KRT25Q7Z3Z0 450 aa11.27□□□□□ -0.61
CTNNB1-211ENST00000465552 DEFB128Q7Z7B8 93 aa11.27□□□□□ -0.61
CTNNB1-211ENST00000465552 TEX2Q8IWB9 1127 aa11.27□□□□□ -0.61
CTNNB1-211ENST00000465552 GLG1Q92896 1179 aa11.27□□□□□ -0.61
CTNNB1-211ENST00000465552 WNT8BQ93098 351 aa11.27□□□□□ -0.61
CTNNB1-211ENST00000465552 ZSCAN31Q96LW9 406 aaPredicted RBP11.27□□□□□ -0.61
CTNNB1-211ENST00000465552 CTAGE1Q96RT6 745 aa11.27□□□□□ -0.61
CTNNB1-211ENST00000465552 SH2B1Q9NRF2 756 aaPredicted RBP11.27□□□□□ -0.61
CTNNB1-211ENST00000465552 TCEAL9Q9UHQ7 104 aa11.27□□□□□ -0.61
CTNNB1-211ENST00000465552 ZNF215Q9UL58 517 aaPredicted RBP11.27□□□□□ -0.61
CTNNB1-211ENST00000465552 CIZ1Q9ULV3 898 aaPredicted RBP11.27□□□□□ -0.61
CTNNB1-211ENST00000465552 LAMA3Q16787 3333 aa11.27□□□□□ -0.61
CTNNB1-211ENST00000465552 C17orf102A2RUQ5 167 aa11.26□□□□□ -0.61
CTNNB1-211ENST00000465552 MAFGO15525 162 aa11.26□□□□□ -0.61
CTNNB1-211ENST00000465552 CCNE2O96020 404 aa11.26□□□□□ -0.61
CTNNB1-211ENST00000465552 MMP1P03956 469 aa11.26□□□□□ -0.61
CTNNB1-211ENST00000465552 SUPT20HL2P0C7V6 817 aa11.26□□□□□ -0.61
CTNNB1-211ENST00000465552 FXR1P51114 621 aaKnown RBP eCLIP11.26□□□□□ -0.61
CTNNB1-211ENST00000465552 IGBP1P78318 339 aa11.26□□□□□ -0.61
CTNNB1-211ENST00000465552 GALNT17Q6IS24 598 aa11.26□□□□□ -0.61
CTNNB1-211ENST00000465552 MFSD5Q6N075 450 aa11.26□□□□□ -0.61
CTNNB1-211ENST00000465552 NIPA1Q7RTP0 329 aa11.26□□□□□ -0.61
CTNNB1-211ENST00000465552 TRMT1LQ7Z2T5 733 aaKnown RBP11.26□□□□□ -0.61
CTNNB1-211ENST00000465552 DIS3L2Q8IYB7 885 aaKnown RBP11.26□□□□□ -0.61
CTNNB1-211ENST00000465552 TMEM199Q8N511 208 aa11.26□□□□□ -0.61
CTNNB1-211ENST00000465552 FAM184AQ8NB25 1140 aa11.26□□□□□ -0.61
CTNNB1-211ENST00000465552 SEPT1Q8WYJ6 367 aa11.26□□□□□ -0.61
CTNNB1-211ENST00000465552 DHX38Q92620 1227 aaKnown RBP11.26□□□□□ -0.61
CTNNB1-211ENST00000465552 LENG9Q96B70 501 aa11.26□□□□□ -0.61
CTNNB1-211ENST00000465552 LRCH3Q96II8 777 aa11.26□□□□□ -0.61
CTNNB1-211ENST00000465552 PCYT2Q99447 389 aa11.26□□□□□ -0.61
CTNNB1-211ENST00000465552 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.26□□□□□ -0.617e-17■■□□□ 13.9
CTNNB1-211ENST00000465552 SEZ6LQ9BYH1 1024 aa11.26□□□□□ -0.61
CTNNB1-211ENST00000465552 RNPEPQ9H4A4 650 aa11.26□□□□□ -0.61
CTNNB1-211ENST00000465552 BRMS1Q9HCU9 246 aa11.26□□□□□ -0.61
CTNNB1-211ENST00000465552 SETD4Q9NVD3 440 aa11.26□□□□□ -0.61
CTNNB1-211ENST00000465552 EMSYQ7Z589 1322 aa11.26□□□□□ -0.61
CTNNB1-211ENST00000465552 MYO9BQ13459 2157 aa11.26□□□□□ -0.61
CTNNB1-211ENST00000465552 ATG2AQ2TAZ0 1938 aa11.25□□□□□ -0.61
CTNNB1-211ENST00000465552 BTBD18B2RXH4 712 aa11.25□□□□□ -0.61
CTNNB1-211ENST00000465552 BACH1O14867 736 aa11.25□□□□□ -0.61
CTNNB1-211ENST00000465552 SNPHO15079 494 aa11.25□□□□□ -0.61
CTNNB1-211ENST00000465552 MSH4O15457 936 aa11.25□□□□□ -0.61
CTNNB1-211ENST00000465552 DHX15O43143 795 aaKnown RBP11.25□□□□□ -0.61
CTNNB1-211ENST00000465552 TREHO43280 583 aa11.25□□□□□ -0.61
CTNNB1-211ENST00000465552 SLC37A4O43826 429 aa11.25□□□□□ -0.61
CTNNB1-211ENST00000465552 CIITAP33076 1130 aa11.25□□□□□ -0.61
CTNNB1-211ENST00000465552 PPIGQ13427 754 aaKnown RBP eCLIP11.25□□□□□ -0.612e-11■■□□□ 12.7
CTNNB1-211ENST00000465552 NEK8Q86SG6 692 aa11.25□□□□□ -0.61
CTNNB1-211ENST00000465552 SESTD1Q86VW0 696 aa11.25□□□□□ -0.61
CTNNB1-211ENST00000465552 CCDC60Q8IWA6 550 aaPredicted RBP11.25□□□□□ -0.61
CTNNB1-211ENST00000465552 LMBR1Q8WVP7 490 aa11.25□□□□□ -0.61
CTNNB1-211ENST00000465552 TRAPPC12Q8WVT3 735 aa11.25□□□□□ -0.61
CTNNB1-211ENST00000465552 ATP6V0A1Q93050 837 aa11.25□□□□□ -0.61
CTNNB1-211ENST00000465552 ZBTB10Q96DT7 871 aa11.25□□□□□ -0.61
CTNNB1-211ENST00000465552 C8orf76Q96K31 380 aa11.25□□□□□ -0.61
CTNNB1-211ENST00000465552 RNPC3Q96LT9 517 aaKnown RBP11.25□□□□□ -0.61
CTNNB1-211ENST00000465552 TMEM121BQ9BXQ6 578 aaPredicted RBP11.25□□□□□ -0.61
CTNNB1-211ENST00000465552 AZI2Q9H6S1 392 aa11.25□□□□□ -0.61
CTNNB1-211ENST00000465552 DDX25Q9UHL0 483 aaKnown RBP11.25□□□□□ -0.61
CTNNB1-211ENST00000465552 SZT2Q5T011 3432 aa11.24□□□□□ -0.61
CTNNB1-211ENST00000465552 RALGAPA2Q2PPJ7 1873 aa11.24□□□□□ -0.61
CTNNB1-211ENST00000465552 A0A1W2PPC1 479 aa11.24□□□□□ -0.61
CTNNB1-211ENST00000465552 CCNT1O60563 726 aaKnown RBP11.24□□□□□ -0.61
CTNNB1-211ENST00000465552 GAS7O60861 476 aa11.24□□□□□ -0.61
CTNNB1-211ENST00000465552 CTSHP09668 335 aa11.24□□□□□ -0.61
CTNNB1-211ENST00000465552 USP11P51784 963 aa11.24□□□□□ -0.61
CTNNB1-211ENST00000465552 PPFIA1Q13136 1202 aa11.24□□□□□ -0.61
CTNNB1-211ENST00000465552 LRCH2Q5VUJ6 765 aa11.24□□□□□ -0.61
CTNNB1-211ENST00000465552 FAM177A1Q8N128 213 aaPredicted RBP11.24□□□□□ -0.61
CTNNB1-211ENST00000465552 CCDC155Q8N6L0 562 aa11.24□□□□□ -0.61
CTNNB1-211ENST00000465552 RETREG2Q8NC44 543 aa11.24□□□□□ -0.61
CTNNB1-211ENST00000465552 TNFRSF25Q93038 417 aa11.24□□□□□ -0.61
CTNNB1-211ENST00000465552 TMX3Q96JJ7 454 aa11.24□□□□□ -0.61
CTNNB1-211ENST00000465552 LLPHQ9BRT6 129 aaKnown RBP11.24□□□□□ -0.61
CTNNB1-211ENST00000465552 TEKT3Q9BXF9 490 aa11.24□□□□□ -0.61
CTNNB1-211ENST00000465552 UNC45AQ9H3U1 944 aa11.24□□□□□ -0.61
CTNNB1-211ENST00000465552 SMARCAD1Q9H4L7 1026 aa11.24□□□□□ -0.61
CTNNB1-211ENST00000465552 ERAP1Q9NZ08 941 aa11.24□□□□□ -0.61
CTNNB1-211ENST00000465552 SAMM50Q9Y512 469 aa11.24□□□□□ -0.61
CTNNB1-211ENST00000465552 FNDC1Q4ZHG4 1894 aaPredicted RBP11.23□□□□□ -0.61
CTNNB1-211ENST00000465552 ZBBXA8MT70 800 aa11.23□□□□□ -0.61
CTNNB1-211ENST00000465552 WNT7AO00755 349 aa11.23□□□□□ -0.61
CTNNB1-211ENST00000465552 LGR5O75473 907 aa11.23□□□□□ -0.61
CTNNB1-211ENST00000465552 CKBP12277 381 aa11.23□□□□□ -0.61
CTNNB1-211ENST00000465552 ATP2B1P20020 1258 aa11.23□□□□□ -0.61
CTNNB1-211ENST00000465552 THPOP40225 353 aa11.23□□□□□ -0.61
CTNNB1-211ENST00000465552 STAT5BP51692 787 aa11.23□□□□□ -0.61
CTNNB1-211ENST00000465552 HMGN5P82970 282 aaKnown RBP11.23□□□□□ -0.61
CTNNB1-211ENST00000465552 BFSP2Q13515 415 aa11.23□□□□□ -0.61
CTNNB1-211ENST00000465552 PLCB4Q15147 1175 aa11.23□□□□□ -0.61
CTNNB1-211ENST00000465552 GRIK4Q16099 956 aa11.23□□□□□ -0.61
CTNNB1-211ENST00000465552 TMEM240Q5SV17 173 aa11.23□□□□□ -0.61
CTNNB1-211ENST00000465552 ZNF618Q5T7W0 954 aa11.23□□□□□ -0.61
CTNNB1-211ENST00000465552 SWSAP1Q6NVH7 229 aa11.23□□□□□ -0.61
CTNNB1-211ENST00000465552 MIS18BP1Q6P0N0 1132 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms